Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18b18f
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    23   3.1  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   3.1  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   3.1  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   3.1  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    22   5.3  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   7.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   7.1  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   9.3  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   9.3  

>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 648 SKQKQRVEQNFNKKFEKPTSNYTQNVKKI 734
           S   + +  N N K+    +NY  N KK+
Sbjct: 84  SLSNRTIHNNNNYKYNYNNNNYNNNCKKL 112


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 648 SKQKQRVEQNFNKKFEKPTSNYTQNVKKI 734
           S   + +  N N K+    +NY  N KK+
Sbjct: 84  SLSNKTIHNNNNYKYNYNNNNYNNNCKKL 112


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 648 SKQKQRVEQNFNKKFEKPTSNYTQNVKKI 734
           S   + +  N N K+    +NY  N KK+
Sbjct: 84  SLSNKTIHNNNNYKYNYNNNNYNNNCKKL 112


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 648 SKQKQRVEQNFNKKFEKPTSNYTQNVKKI 734
           S   + +  N N K+    +NY  N KK+
Sbjct: 84  SLSNKTIHNNNNYKYNYNNNNYNNNCKKL 112


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 675 NFNKKFEKPTSNYTQNVKKI 734
           N+N  +    +NY  N KK+
Sbjct: 93  NYNNNYNNYNNNYNTNYKKL 112


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 660 QRVEQNFNKKFEKPTSNYTQNVKKIIK 740
           QRVEQ   ++FEK    + +   K  K
Sbjct: 179 QRVEQEAKRRFEKYGQLFMEETLKAAK 205


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 236 ESKTRHDH*SQAICAHQK 289
           +S+ RH H +Q I  HQ+
Sbjct: 791 QSQQRHQHAAQMIYGHQQ 808


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 675 NFNKKFEKPTSNYTQNVKKI 734
           N+N  ++K   NY  N+++I
Sbjct: 108 NYNNNYKKLYKNYIINIEQI 127


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 675 NFNKKFEKPTSNYTQNVKKI 734
           N+N  ++K   NY  N+++I
Sbjct: 108 NYNNNYKKLYKNYIINIEQI 127


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,629
Number of Sequences: 438
Number of extensions: 4765
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)