Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18b13r
         (844 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y08969-1|CAA70166.1|  217|Drosophila melanogaster Nascent polype...    79   8e-15
AY075332-1|AAL68199.1|  217|Drosophila melanogaster GH11940p pro...    79   8e-15
AF017783-1|AAB97513.1|  217|Drosophila melanogaster alpha NAC pr...    79   8e-15
AE013599-1584|AAM68654.1|  217|Drosophila melanogaster CG8759-PC...    79   8e-15
AE013599-1583|AAF58457.1|  217|Drosophila melanogaster CG8759-PB...    79   8e-15
AE013599-1582|AAM68653.1|  217|Drosophila melanogaster CG8759-PA...    79   8e-15
AY089219-1|AAL89957.1|  340|Drosophila melanogaster AT01837p pro...    52   1e-06
BT012499-1|AAS93770.1|  347|Drosophila melanogaster GH09281p pro...    52   1e-06
AE014134-190|AAF51428.2|  347|Drosophila melanogaster CG4415-PA ...    52   1e-06
AY071481-1|AAL49103.1|  124|Drosophila melanogaster RE55111p pro...    31   1.5  
AE014297-1787|AAF55011.1|  124|Drosophila melanogaster CG9922-PA...    31   1.5  

>Y08969-1|CAA70166.1|  217|Drosophila melanogaster Nascent
           polypeptide associatedcomplex protein alpha subunit
           protein.
          Length = 217

 Score = 79.0 bits (186), Expect = 8e-15
 Identities = 35/47 (74%), Positives = 44/47 (93%)
 Frame = -1

Query: 769 EGVDETGVDEKDVEIVMSQANVSRAKAVRALKNNQSDIVNAIMELTM 629
           E VD+TGVDEKD+E+V++QAN +RAKA++ALKNN +DIVNAIMELTM
Sbjct: 170 EDVDDTGVDEKDIELVITQANTTRAKAIKALKNNDNDIVNAIMELTM 216


>AY075332-1|AAL68199.1|  217|Drosophila melanogaster GH11940p
           protein.
          Length = 217

 Score = 79.0 bits (186), Expect = 8e-15
 Identities = 35/47 (74%), Positives = 44/47 (93%)
 Frame = -1

Query: 769 EGVDETGVDEKDVEIVMSQANVSRAKAVRALKNNQSDIVNAIMELTM 629
           E VD+TGVDEKD+E+V++QAN +RAKA++ALKNN +DIVNAIMELTM
Sbjct: 170 EDVDDTGVDEKDIELVITQANTTRAKAIKALKNNNNDIVNAIMELTM 216


>AF017783-1|AAB97513.1|  217|Drosophila melanogaster alpha NAC
           protein.
          Length = 217

 Score = 79.0 bits (186), Expect = 8e-15
 Identities = 35/47 (74%), Positives = 44/47 (93%)
 Frame = -1

Query: 769 EGVDETGVDEKDVEIVMSQANVSRAKAVRALKNNQSDIVNAIMELTM 629
           E VD+TGVDEKD+E+V++QAN +RAKA++ALKNN +DIVNAIMELTM
Sbjct: 170 EDVDDTGVDEKDIELVITQANTTRAKAIKALKNNNNDIVNAIMELTM 216


>AE013599-1584|AAM68654.1|  217|Drosophila melanogaster CG8759-PC,
           isoform C protein.
          Length = 217

 Score = 79.0 bits (186), Expect = 8e-15
 Identities = 35/47 (74%), Positives = 44/47 (93%)
 Frame = -1

Query: 769 EGVDETGVDEKDVEIVMSQANVSRAKAVRALKNNQSDIVNAIMELTM 629
           E VD+TGVDEKD+E+V++QAN +RAKA++ALKNN +DIVNAIMELTM
Sbjct: 170 EDVDDTGVDEKDIELVITQANTTRAKAIKALKNNNNDIVNAIMELTM 216


>AE013599-1583|AAF58457.1|  217|Drosophila melanogaster CG8759-PB,
           isoform B protein.
          Length = 217

 Score = 79.0 bits (186), Expect = 8e-15
 Identities = 35/47 (74%), Positives = 44/47 (93%)
 Frame = -1

Query: 769 EGVDETGVDEKDVEIVMSQANVSRAKAVRALKNNQSDIVNAIMELTM 629
           E VD+TGVDEKD+E+V++QAN +RAKA++ALKNN +DIVNAIMELTM
Sbjct: 170 EDVDDTGVDEKDIELVITQANTTRAKAIKALKNNNNDIVNAIMELTM 216


>AE013599-1582|AAM68653.1|  217|Drosophila melanogaster CG8759-PA,
           isoform A protein.
          Length = 217

 Score = 79.0 bits (186), Expect = 8e-15
 Identities = 35/47 (74%), Positives = 44/47 (93%)
 Frame = -1

Query: 769 EGVDETGVDEKDVEIVMSQANVSRAKAVRALKNNQSDIVNAIMELTM 629
           E VD+TGVDEKD+E+V++QAN +RAKA++ALKNN +DIVNAIMELTM
Sbjct: 170 EDVDDTGVDEKDIELVITQANTTRAKAIKALKNNNNDIVNAIMELTM 216


>AY089219-1|AAL89957.1|  340|Drosophila melanogaster AT01837p
           protein.
          Length = 340

 Score = 52.0 bits (119), Expect = 1e-06
 Identities = 24/47 (51%), Positives = 32/47 (68%)
 Frame = -1

Query: 769 EGVDETGVDEKDVEIVMSQANVSRAKAVRALKNNQSDIVNAIMELTM 629
           E  D  G+  KD+E+V  QA  SR KA++AL  N +D+VNAIM LT+
Sbjct: 293 EAADAMGLHAKDIELVQMQAACSRKKAIQALLKNDNDVVNAIMALTV 339


>BT012499-1|AAS93770.1|  347|Drosophila melanogaster GH09281p
           protein.
          Length = 347

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 24/47 (51%), Positives = 32/47 (68%)
 Frame = -1

Query: 769 EGVDETGVDEKDVEIVMSQANVSRAKAVRALKNNQSDIVNAIMELTM 629
           E  D  G+  KD+E+V  QA  SR KA++AL  N +D+VNAIM LT+
Sbjct: 300 EDADAMGLHAKDIELVQMQAACSRKKAIQALLKNDNDVVNAIMALTV 346


>AE014134-190|AAF51428.2|  347|Drosophila melanogaster CG4415-PA
           protein.
          Length = 347

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 24/47 (51%), Positives = 32/47 (68%)
 Frame = -1

Query: 769 EGVDETGVDEKDVEIVMSQANVSRAKAVRALKNNQSDIVNAIMELTM 629
           E  D  G+  KD+E+V  QA  SR KA++AL  N +D+VNAIM LT+
Sbjct: 300 EDADAMGLHAKDIELVQMQAACSRKKAIQALLKNDNDVVNAIMALTV 346


>AY071481-1|AAL49103.1|  124|Drosophila melanogaster RE55111p
           protein.
          Length = 124

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 12/35 (34%), Positives = 24/35 (68%)
 Frame = -1

Query: 748 VDEKDVEIVMSQANVSRAKAVRALKNNQSDIVNAI 644
           V ++D+E++M++  VS+A A + L+    D+V A+
Sbjct: 84  VKKEDIELIMNELLVSKAHAEKVLREQSGDVVAAL 118


>AE014297-1787|AAF55011.1|  124|Drosophila melanogaster CG9922-PA
           protein.
          Length = 124

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 12/35 (34%), Positives = 24/35 (68%)
 Frame = -1

Query: 748 VDEKDVEIVMSQANVSRAKAVRALKNNQSDIVNAI 644
           V ++D+E++M++  VS+A A + L+    D+V A+
Sbjct: 84  VKKEDIELIMNELLVSKAHAEKVLREQSGDVVAAL 118


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,301,995
Number of Sequences: 53049
Number of extensions: 570205
Number of successful extensions: 1371
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1371
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)