Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18b13f
         (747 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   4.3  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   5.7  
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            24   5.7  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   5.7  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   7.6  

>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -2

Query: 542 TVVPVVEASLPVAVVSGALNLSAAAMVACVDKSSILASPK 423
           T   VV A LPV VVS AL       +  +   S+ A P+
Sbjct: 52  TAAVVVNADLPVKVVSKALKGLMVVDIGDMRVVSVYAPPR 91


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -3

Query: 64  EVILSRRRSLLKISEYEKSY 5
           E +L  +++L++ISE EK Y
Sbjct: 375 EQLLHEKQNLIRISELEKDY 394


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -1

Query: 519 VIASGCGLWCLESLCCSHGG 460
           V A G  LW L S C  HGG
Sbjct: 316 VYACGLVLWELVSRCTVHGG 335


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
 Frame = +1

Query: 241  DIVSKSKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPD-VYKNPHSDTY 417
            D V + + +R    A   M        Q ++ +  +  + I FV+  PD   +N  + T 
Sbjct: 1300 DKVCRGETNRRWSMALSSMGGHSQTSAQSLQSIAGQTERKISFVLQEPDNESENSSNTTL 1359

Query: 418  IVFGEAKIEDLSTQATMAAAERF 486
             + GE  ++ +   AT+   +R+
Sbjct: 1360 TIQGEENVQRM-WLATVVPCDRW 1381


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/55 (21%), Positives = 26/55 (47%)
 Frame = -1

Query: 339  HSLYSLYWFETEFTHYLSGLLLTTRLFRFADDVNSSNRVCDSTCIWCTCIFQFWN 175
            H+++    F++  T  L G++  T L        + + VC++T    + + Q W+
Sbjct: 1028 HAMFECPRFDSTRTELLHGVVPETLLEHMLQSPENWSNVCEATKRITSALQQDWD 1082


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.128    0.345 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,232
Number of Sequences: 2352
Number of extensions: 11874
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)