Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18b11f
(744 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 54 8e-08
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 52 6e-07
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 49 3e-06
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z81486-11|CAB03994.1| 1150|Caenorhabditis elegans Hypothetical p... 29 3.5
Z78015-6|CAB01437.1| 1150|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF039039-4|AAB94177.2| 591|Caenorhabditis elegans Hypothetical ... 28 6.1
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 54.4 bits (125), Expect = 8e-08
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 1/187 (0%)
Frame = +1
Query: 181 RIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQFV 360
R++GG+ S ++ P+ LL + +G CG SL+ N ++TAAHC+ R + V
Sbjct: 57 RLIGGSESSPHSWPWTVQLL----SRLGHHRCGGSLIDPNFVLTAAHCFAKDRRPTSYSV 112
Query: 361 VVLGSNTLFHGGVRVTTRQVFVHPQWNPTLLNN-DVAMIYLPHRVTLNNNIKPIALPNTA 537
V G + RVT V +HP +N ++ D A++ + V + +PI LP+
Sbjct: 113 RVGGHRSGSGSPHRVTA--VSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICLPSLP 170
Query: 538 DLNNLFVGQWAVAAGYGLTSDAQTGISVNQVMSQVNLQVITVQQCMAVFGSNFVRKLKHL 717
+ N + V G+G T + + +S L+ I V +F S+ + +
Sbjct: 171 AVEN----RLCVVTGWGSTIEGSS-------LSAPTLREIHVPLLSTLFCSSLPNYIGRI 219
Query: 718 HERSWRC 738
H S C
Sbjct: 220 HLPSMLC 226
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 51.6 bits (118), Expect = 6e-07
Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 4/141 (2%)
Frame = +1
Query: 178 ARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQF 357
AR+VGG + A P+ A L A CG+S+L L+TAAHC F+ + + +
Sbjct: 25 ARVVGGFETVPGAFPWTAALRN---KATKAHHCGASILDKTHLITAAHC-FEEDERVSSY 80
Query: 358 VVVLG--SNTLFHGGVRV-TTRQVFVHPQWNPTLLNNDVAMIYLPH-RVTLNNNIKPIAL 525
VV+G N G ++ +++ +P + + ++D+A++ +P+ + N +PI L
Sbjct: 81 EVVVGDWDNNQTDGNEQIFYLQRIHFYPLYK-DIFSHDIAILEIPYPGIEFNEYAQPICL 139
Query: 526 PNTADLNNLFVGQWAVAAGYG 588
P+ + G+ V +G+G
Sbjct: 140 PSKDFVYT--PGRQCVVSGWG 158
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 49.2 bits (112), Expect = 3e-06
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 4/179 (2%)
Frame = +1
Query: 151 DSSVQPDNAARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWF 330
+ S +P + RI+GG A+ ++A L+ N G CG++++ LVTAAHC
Sbjct: 27 EESYKPIFSFRIIGGNSIDDGAN-WMAKLVSYGDNGQGI-LCGATVIDDFWLVTAAHCAL 84
Query: 331 DGRFQANQFVVVLGSNTLFHGGVRVTTRQVFVHPQWNPTLLNNDVAMIYLPHRVTLNNNI 510
+ Q FV V V ++ ++H +N +ND+A++ + ++ I
Sbjct: 85 --QLQTRSFVYVREPKNNRERSFSV--KEAYIHSGYNNQTADNDIALLRISSDLS-KLGI 139
Query: 511 KPIALPNTADLNNLFVGQWAVAAGYGLT----SDAQTGISVNQVMSQVNLQVITVQQCM 675
KP+ L + D L + V GYGLT S + + +Q + ++ +I+ C+
Sbjct: 140 KPVCLVHD-DSKLLKQYKNGVVIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCV 197
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 39.1 bits (87), Expect = 0.003
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Frame = +1
Query: 226 LAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQFVVVLGS---NTLFHGG 396
LA ++ F + T+ CG L++ + ++T+AHC F G A V LG N G
Sbjct: 31 LASVITRFPDGT-TNVCGGVLIAPSIVITSAHCVFSGDDFAVTAKVTLGDVHLNKHDDGE 89
Query: 397 VRVTTRQVFVHPQW--NPTLLNNDVAMIYLPHRVTLNN---NIKPIALPNTADLN 546
+ + + ++ + + N+DVA+I+LP R + + +++ LP+T +N
Sbjct: 90 QEFRSHAMAISKKFFNDASEANDDVAVIFLPQRADVCHSPLSLQIAKLPSTGSVN 144
>Z81486-11|CAB03994.1| 1150|Caenorhabditis elegans Hypothetical
protein C53A5.2 protein.
Length = 1150
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 477 VNHCHIVVQKGGIPLRMYKNL 415
VN+C VVQKG I +Y+NL
Sbjct: 602 VNNCKTVVQKGNIITNVYRNL 622
>Z78015-6|CAB01437.1| 1150|Caenorhabditis elegans Hypothetical
protein C53A5.2 protein.
Length = 1150
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 477 VNHCHIVVQKGGIPLRMYKNL 415
VN+C VVQKG I +Y+NL
Sbjct: 602 VNNCKTVVQKGNIITNVYRNL 622
>AF039039-4|AAB94177.2| 591|Caenorhabditis elegans Hypothetical
protein T08B1.1 protein.
Length = 591
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +1
Query: 334 GRFQANQFVVVLGSNTLFHGGVRVTTRQVFVHPQWNPTLLNNDVAMIYLP-HRVTLN 501
G +Q F+V+L ++ + G P WN TL NN +I P H T N
Sbjct: 43 GPYQIFCFIVILYASIEWAGNSTFMHLLGSFEPDWNCTLANNQTVIITAPTHDDTCN 99
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,667,196
Number of Sequences: 27780
Number of extensions: 378164
Number of successful extensions: 1088
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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