Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18b10f
(394 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0210 + 15470680-15470715,15473088-15473342,15473417-154734... 97 3e-21
07_03_1305 - 25638531-25638584,25638909-25638990,25639087-256391... 97 4e-21
04_04_0390 - 24882572-24882577,24882928-24883009,24883089-248832... 79 2e-15
02_05_1031 - 33626527-33626580,33627482-33627563,33628892-33628911 58 2e-09
02_05_0546 + 29889861-29890182,29891057-29892798 31 0.25
09_06_0272 - 21962495-21962524,21962742-21962918 31 0.44
05_05_0223 - 23406814-23407477,23407597-23407919 31 0.44
02_05_1072 - 33878676-33878747,33878926-33879949,33880684-338808... 30 0.58
06_01_0728 - 5356400-5356676,5356888-5357090,5357181-5357474,535... 29 1.3
04_04_0692 - 27307349-27307728,27308381-27308546 29 1.3
04_04_0293 - 24189344-24189350,24189804-24190026,24190411-241905... 29 1.8
04_02_0017 - 8572400-8572732,8572818-8572919,8573138-8573230,857... 28 3.1
09_04_0320 - 16656620-16657243,16658198-16659106 27 5.4
06_01_0772 + 5770502-5770619,5771035-5772335 27 5.4
02_05_0783 + 31723330-31723585,31723683-31723857,31723953-317241... 27 5.4
12_01_0314 - 2395113-2395760,2396151-2396738,2397218-2397252,239... 27 7.1
08_02_0703 - 20188489-20190246 27 7.1
06_01_0580 + 4148969-4149101,4149394-4149546,4149682-4150095,415... 27 7.1
04_04_0848 - 28677545-28677635,28677760-28677887,28678020-286781... 27 7.1
03_05_0451 - 24456923-24457069,24457161-24457310,24457408-244575... 27 7.1
12_02_1088 - 25954506-25954652,25954769-25954918,25955011-259551... 26 9.4
10_05_0055 - 8625420-8625737,8625835-8625988,8626202-8626439,862... 26 9.4
08_02_0643 + 19648114-19648612,19648690-19648787 26 9.4
07_01_0974 + 8211602-8212051 26 9.4
05_01_0431 + 3412178-3412336,3413012-3413109,3413185-3413312,341... 26 9.4
04_01_0142 + 1640472-1640611,1641618-1641744,1642233-1642425,164... 26 9.4
03_05_0237 - 22235757-22236979,22238564-22238567 26 9.4
>03_03_0210 +
15470680-15470715,15473088-15473342,15473417-15473499,
15473617-15473698,15474886-15474939
Length = 169
Score = 97.5 bits (232), Expect = 3e-21
Identities = 39/75 (52%), Positives = 49/75 (65%)
Frame = +2
Query: 59 KSPADLKTAPFDPRFPNQNQTRHCYQSYVDFHRCQKVRGEKYEPCYYFKRVYRSLCPNEW 238
K ++TAP D RFP NQTRHC+ YV++HRC +GE C F + YRSLCP EW
Sbjct: 93 KPEIKIETAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGEDAPECDKFAKYYRSLCPGEW 152
Query: 239 VDKWDNQRAEGTFAG 283
V++W+ QR GTF G
Sbjct: 153 VERWNEQRENGTFPG 167
>07_03_1305 -
25638531-25638584,25638909-25638990,25639087-25639169,
25639252-25639515,25639984-25640060,25640183-25640277,
25640953-25641065
Length = 255
Score = 97.1 bits (231), Expect = 4e-21
Identities = 37/75 (49%), Positives = 50/75 (66%)
Frame = +2
Query: 59 KSPADLKTAPFDPRFPNQNQTRHCYQSYVDFHRCQKVRGEKYEPCYYFKRVYRSLCPNEW 238
K ++TAP D RFP NQTRHC+ Y+++HRC +GE C F + YRSLCP+EW
Sbjct: 179 KPEIKIETAPADFRFPTTNQTRHCFTRYIEYHRCVAAKGEGAPECEKFAKYYRSLCPSEW 238
Query: 239 VDKWDNQRAEGTFAG 283
+++W+ QR GTF G
Sbjct: 239 IERWNEQRENGTFPG 253
>04_04_0390 -
24882572-24882577,24882928-24883009,24883089-24883200,
24883411-24883441
Length = 76
Score = 78.6 bits (185), Expect = 2e-15
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = +2
Query: 71 DLKTAPFDPRFPNQNQTRHCYQSYVDFHRCQKVRGEKYEPCYYFKRVYRSLCPNEW 238
++KTAP D RFP NQTRHC+ Y+++HRC +GE C F + YRSLCP EW
Sbjct: 20 EIKTAPADFRFPTTNQTRHCFTRYIEYHRCVNAKGEATADCEKFAKYYRSLCPAEW 75
>02_05_1031 - 33626527-33626580,33627482-33627563,33628892-33628911
Length = 51
Score = 58.4 bits (135), Expect = 2e-09
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +2
Query: 158 CQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAG 283
C + +GE + C + + YRSLCP EW+++W QRA GTFAG
Sbjct: 8 CIEAKGEGSDECTKYAKCYRSLCPGEWIERWKEQRANGTFAG 49
>02_05_0546 + 29889861-29890182,29891057-29892798
Length = 687
Score = 31.5 bits (68), Expect = 0.25
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +3
Query: 60 NRPPTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSG 239
N PP + +T+G+L K T + + + AKN + T S + T P++G
Sbjct: 98 NGPPNLVRTGATYGNLNKSFHDTCARSNLNAVQSSNPVAKNQDTKTASIDATA-GNPLTG 156
Query: 240 STSGTTSAPKAPSP 281
+ + AP P P
Sbjct: 157 HHATPSVAPVPPKP 170
>09_06_0272 - 21962495-21962524,21962742-21962918
Length = 68
Score = 30.7 bits (66), Expect = 0.44
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 296 GSKSYRRRCLRRAGCPTCRPTHWGRET 216
G +R++ G P CRP HW R T
Sbjct: 11 GGGDFRQKVWSMTGGPYCRPVHWRRNT 37
>05_05_0223 - 23406814-23407477,23407597-23407919
Length = 328
Score = 30.7 bits (66), Expect = 0.44
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 168 FAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKAPS 278
FA+ N A++S C+G A + TS +S P+AP+
Sbjct: 219 FASSNGGDASVSWPCSGDDAQNNSETSHESSPPEAPA 255
>02_05_1072 -
33878676-33878747,33878926-33879949,33880684-33880804,
33881150-33881560,33881781-33881933,33882321-33882468
Length = 642
Score = 30.3 bits (65), Expect = 0.58
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 75 SKQHLSTHGSLT-KIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTSG 251
+K HLS G+ + +G AT + T + +K+ + T+ + GLS MSG+
Sbjct: 314 NKYHLSLPGNQKGNLGQGLATSLGQTQ-MQQKWIHEETDDLSTILSGNGLSNGMSGTLQS 372
Query: 252 TTSAPKAP 275
TS+P P
Sbjct: 373 VTSSPLLP 380
>06_01_0728 -
5356400-5356676,5356888-5357090,5357181-5357474,
5357940-5358063,5358157-5359496
Length = 745
Score = 29.1 bits (62), Expect = 1.3
Identities = 22/81 (27%), Positives = 31/81 (38%)
Frame = +3
Query: 66 PPTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGST 245
PP S L SLTK + S+ A A+ ++HA+ + A +G
Sbjct: 76 PPASAALLRRRSSLTKPKSRFVEPAAPPSSAAAAAASSTSSHASPAH-----PAAAAGGG 130
Query: 246 SGTTSAPKAPSPVGFRS*TFP 308
SG S P P+ FP
Sbjct: 131 SGAASTPHTPAEADDEEEVFP 151
>04_04_0692 - 27307349-27307728,27308381-27308546
Length = 181
Score = 29.1 bits (62), Expect = 1.3
Identities = 21/63 (33%), Positives = 27/63 (42%)
Frame = +3
Query: 90 STHGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSAPK 269
S L + GT T VT T + R F +T H + T A +SGS +G T K
Sbjct: 78 SAANPLRSYKDGT-TIVTLTRSGTRYFICGSTGHCGAGMKLTVTVATLSGSAAGGTRLAK 136
Query: 270 APS 278
S
Sbjct: 137 PSS 139
>04_04_0293 -
24189344-24189350,24189804-24190026,24190411-24190529,
24191331-24191578
Length = 198
Score = 28.7 bits (61), Expect = 1.8
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Frame = +3
Query: 123 GTATKVTWTSTVARKFAA------KNTNHATISRECTGLSAPMSGSTSGTTSAPKAPSPV 284
G A K T + ARK A K T A + + T +AP S + S +P+APSPV
Sbjct: 17 GPAPKATAPAGPARKAPAAAGPAPKATAPAGPAPKATATAAPSSKAPSPAAPSPEAPSPV 76
>04_02_0017 -
8572400-8572732,8572818-8572919,8573138-8573230,
8573391-8573519,8573781-8574025,8574184-8574453,
8574590-8574752,8575965-8576063
Length = 477
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -3
Query: 344 DLIKTNRNKLKHWERLGSKSYR 279
+L KTNR+K+K+ GS+SY+
Sbjct: 306 ELNKTNRSKVKYHHTTGSRSYK 327
>09_04_0320 - 16656620-16657243,16658198-16659106
Length = 510
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 96 HGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISR 206
HG + ++ GTAT V +S A + A + +H +R
Sbjct: 68 HGPVMSLKLGTATAVVASSAAAARDALQRYDHVLAAR 104
>06_01_0772 + 5770502-5770619,5771035-5772335
Length = 472
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2
Query: 20 NG*IIISNMPEMIKSPADLKTAPFDPRFPNQNQTRHCYQSYVDFHRCQKVRGEKYEPCYY 199
NG ++++ EMI +T+ + F ++T S + +HR + R E Y CY
Sbjct: 323 NGQRLVTSSSEMIVDSGAQRTSLWPSTFALLDKTITQAMSSIGYHRTSRARQESY-ICYL 381
Query: 200 FKRVY 214
+ Y
Sbjct: 382 SEHDY 386
>02_05_0783 +
31723330-31723585,31723683-31723857,31723953-31724166,
31724388-31725032,31725199-31725335,31725440-31725554
Length = 513
Score = 27.1 bits (57), Expect = 5.4
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +3
Query: 180 NTNHATISRECTGLSAPMSGSTSGTTSA 263
NTN +T+S E T S S S S TTSA
Sbjct: 181 NTNLSTVSNESTTKSILSSVSVSDTTSA 208
>12_01_0314 -
2395113-2395760,2396151-2396738,2397218-2397252,
2397546-2397632,2397913-2397985,2398648-2398714,
2398795-2398931,2400196-2400217,2400733-2400807,
2402281-2402365,2402605-2403334
Length = 848
Score = 26.6 bits (56), Expect = 7.1
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 293 SKSYRRRCLRRAGCPTCRPTHWGRETCTLS*NSSMVRIFRRELSGNGG 150
S+ RRR LRRA C CR R + T + M R +RR G+ G
Sbjct: 113 SQRQRRRLLRRAVCAVCR-----RSSTTATRCERMTR-WRRGWKGSNG 154
>08_02_0703 - 20188489-20190246
Length = 585
Score = 26.6 bits (56), Expect = 7.1
Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Frame = +3
Query: 45 CLR*SNRPPTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLS 224
C R PP + + R T+TVA A+++++ + S + S
Sbjct: 112 CARHGRAPPAPPS--AAEAREAALLRAVPAAAARTTTVAAMVPARSSSNLSCSSRASAAS 169
Query: 225 APMSGSTS--GTTSAPKA 272
SGS+S T P+A
Sbjct: 170 TSSSGSSSEMATVEVPRA 187
>06_01_0580 +
4148969-4149101,4149394-4149546,4149682-4150095,
4150218-4150294,4151479-4152699,4153057-4153128
Length = 689
Score = 26.6 bits (56), Expect = 7.1
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +3
Query: 93 THGS---LTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGST 245
THG+ L K R + W V RKF + N+ S+EC + P S T
Sbjct: 111 THGACDYLLKPVRIEELRNIWQHVVRRKFGNRERNNLDFSKEC---NKPQSADT 161
>04_04_0848 -
28677545-28677635,28677760-28677887,28678020-28678126,
28678242-28678320,28678426-28678515,28678603-28678854,
28680351-28680497,28680711-28681035,28681177-28681406
Length = 482
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 57 SNRPPTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTNHAT 197
++ P ++ HG++ K R G + TW + KF+ + N T
Sbjct: 308 TDNPKVVEELKEEHGTILKKREGVNSGFTWEEYRSLKFSTQVMNEIT 354
>03_05_0451 -
24456923-24457069,24457161-24457310,24457408-24457513,
24457715-24458040,24458129-24458263,24458350-24458430,
24458516-24458704,24458794-24458986,24459068-24459174,
24459280-24459354,24459446-24459601,24459745-24459828,
24459933-24460046,24460119-24460214,24460302-24460392,
24460500-24460615,24460878-24461037,24461964-24462217
Length = 859
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +3
Query: 114 IRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTS 248
+ + T T V W V K + +S C+G++A G S
Sbjct: 190 LSKATGTAVDWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVS 234
>12_02_1088 -
25954506-25954652,25954769-25954918,25955011-25955116,
25955247-25955569,25955656-25955790,25956310-25956444,
25956445-25956525,25956619-25956807,25956935-25957127,
25957244-25957350,25957457-25957531,25957619-25957774,
25957968-25958051,25958152-25958265,25958345-25958440,
25958543-25958633,25958721-25958836,25958934-25959093,
25960390-25960634
Length = 900
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +3
Query: 120 RGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTS 248
+ T T V W V K + +S C+G++A G S
Sbjct: 189 KATGTAVEWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVS 231
>10_05_0055 -
8625420-8625737,8625835-8625988,8626202-8626439,
8626610-8626820,8626909-8627033,8627451-8627570,
8627749-8628625
Length = 680
Score = 26.2 bits (55), Expect = 9.4
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 117 RRGTATKV-TWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSA 263
R G A ++ W+ +AA T H+ + T LSA ST+ +A
Sbjct: 25 RHGRALELMNWSCNNGSSYAANTTYHSNVRAVLTALSAITPNSTARFATA 74
>08_02_0643 + 19648114-19648612,19648690-19648787
Length = 198
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 5/23 (21%)
Frame = -3
Query: 284 YRRRCLRR-----AGCPTCRPTH 231
+ RRC+RR CPTC TH
Sbjct: 135 FHRRCVRRWLRVNLACPTCNATH 157
>07_01_0974 + 8211602-8212051
Length = 149
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 213 TGLSAPMSGSTSGTTSAPKAPSPVG 287
T + P GTT+AP APSP G
Sbjct: 70 TNPAPPAVPCNCGTTTAPAAPSPPG 94
>05_01_0431 +
3412178-3412336,3413012-3413109,3413185-3413312,
3413770-3413881,3414309-3414489,3414714-3414896,
3415133-3415315,3416062-3416131,3416413-3416522,
3416604-3416908,3417079-3417175,3417622-3417765,
3418217-3418303,3418387-3418473,3418566-3418706,
3418805-3418930,3419166-3419264,3419690-3419757,
3420275-3420341,3420713-3420883,3420959-3421048,
3421831-3421911,3423397-3423470,3423784-3423855,
3423925-3424017,3424138-3424204
Length = 1030
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = +2
Query: 197 YFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI*ILNV 304
+F R ++ L PNEW++ ++ + +G + L++
Sbjct: 879 HFLRGFQQLIPNEWINMFNEHEFQVLISGSLESLDI 914
>04_01_0142 +
1640472-1640611,1641618-1641744,1642233-1642425,
1642793-1643349
Length = 338
Score = 26.2 bits (55), Expect = 9.4
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -3
Query: 299 LGSKSYRR-RCLRRAGCPTCRPTHWGRETCTLS*NSSMVRIFRRELSGNGGSPR 141
+G K R C AG P WG + +M RR L GN G+P+
Sbjct: 1 MGGKRERLCHCAHLAGQPPLLTAGWGGRRERARRSHAMPTGRRRSLQGNDGTPK 54
>03_05_0237 - 22235757-22236979,22238564-22238567
Length = 408
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 173 GEKYEPCYYFKRVYRSLCPNEWVDKWD 253
G++Y C Y K + ++ + V+KWD
Sbjct: 220 GDRYLDCAYHKGRFHAVTLHRMVEKWD 246
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,803,519
Number of Sequences: 37544
Number of extensions: 225555
Number of successful extensions: 738
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 672845152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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