Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18a23r
(897 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 29 0.076
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 28 0.13
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 0.71
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 25 0.94
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 24 1.6
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 24 1.6
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 24 2.2
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 24 2.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.9
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 3.8
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 5.0
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 6.6
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 22 6.6
AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 22 6.6
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 22 6.6
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 28.7 bits (61), Expect = 0.076
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -1
Query: 780 RRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGN 658
+RN NN IT GN N+ ++N N N +G N NGN
Sbjct: 220 QRNSNN-STITAGNANTNASNNNNNNNNNNNNNNGANDNGN 259
Score = 27.9 bits (59), Expect = 0.13
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = -1
Query: 855 TWKNRPRKTSLCQGNG---ANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNL 700
T + +++ GN A+N N NN+ NGN N N+N NG++
Sbjct: 218 TCQRNSNNSTITAGNANTNASNNNNNNNNNNNNNNGANDNGNGNGASNNNNNGDM 272
Score = 21.8 bits (44), Expect = 8.7
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = -1
Query: 813 NGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLF 691
N +NN N NN+ N N N SN N N +F
Sbjct: 236 NASNNNN---NNNNNNNNNNGANDNGNGNGASNNNNNGDMF 273
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 27.9 bits (59), Expect = 0.13
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 530 PTLGTPLTAVLYRPLARPRQST 595
P +GTP T ++Y+P P Q++
Sbjct: 847 PVIGTPSTGMMYKPFLIPEQTS 868
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 25.4 bits (53), Expect = 0.71
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 783 TRRNQNNHQVITNGNVNSIRNSNYNGN 703
T N NN++ N N N+ N+NYN N
Sbjct: 322 TIHNNNNYKY--NYNNNNYNNNNYNNN 346
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 25.0 bits (52), Expect = 0.94
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -1
Query: 822 CQGNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 703
C N N+ +N NN Q N N+ +N+N N N
Sbjct: 414 CVNNNQNDNIQNTNNQNDNN-QKNNKKNANNQKNNNQNDN 452
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 24.2 bits (50), Expect = 1.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 352 TTPPGPSRIQTGNPVGSATSLSSS 423
TTP PSR Q+ + SA ++S+S
Sbjct: 530 TTPVLPSRFQSHPSIDSANTISNS 553
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 24.2 bits (50), Expect = 1.6
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -1
Query: 783 TRRNQNNHQVIT-NGNVNSIRNSNYNGNLPLF 691
T N NN+ N N N+ N+NYN L+
Sbjct: 322 TIHNNNNYNNNNYNNNYNNYNNNNYNNYKKLY 353
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 2.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 768 NNHQVITNGNVNSIRNSNYNGN 703
NN++ N N+ N+NYN N
Sbjct: 87 NNYKYSNYNNYNNNYNNNYNNN 108
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 774 NQNNHQVITNGNVNSIRNSNYNGN 703
N NN+ N N N+ N+NYN N
Sbjct: 93 NYNNY----NNNYNNNYNNNYNNN 112
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 2.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 768 NNHQVITNGNVNSIRNSNYNGN 703
NN++ N N+ N+NYN N
Sbjct: 87 NNYKYSNYNNYNNNYNNNYNNN 108
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 774 NQNNHQVITNGNVNSIRNSNYNGN 703
N NN+ N N N+ N+NYN N
Sbjct: 93 NYNNY----NNNYNNNYNNNYNNN 112
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 580 TTPVHNNNVAVGDGQQGGAD 639
+ P +N + GDG++GGA+
Sbjct: 1052 SNPSYNFSSVSGDGEEGGAE 1071
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 580 TTPVHNNNVAVGDGQQGGAD 639
+ P +N + GDG++GGA+
Sbjct: 1048 SNPSYNFSSVSGDGEEGGAE 1067
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.0 bits (47), Expect = 3.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 768 NNHQVITNGNVNSIRNSNYN 709
NN++ N N+ N+NYN
Sbjct: 320 NNYKYSNYNNYNNYNNNNYN 339
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.6 bits (46), Expect = 5.0
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 769 LVTSGEKPVLVVCTVSLT*GCLPRXVL 849
++T EKP + V ++ + CLP +L
Sbjct: 416 VLTIEEKPFVYVREIAFSESCLPEEIL 442
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.2 bits (45), Expect = 6.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 188 RL*EQVLTLQPGWGFLPPLG*KSP 259
R+ + LQPG F PLG + P
Sbjct: 458 RMDRDAVYLQPGMSFGEPLGLRRP 481
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 22.2 bits (45), Expect = 6.6
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Frame = -1
Query: 705 NLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVP-SVG 529
+LP+ +HG S + + L SD + +++R G +T VP ++G
Sbjct: 121 SLPVIFWIHGGAFQFGSGIPMGAK--YLMDSDVIFVTINYRLGILGFLSTEDEVVPGNMG 178
Query: 528 -QFLGNFLVWLINN---GGGNWGRVHLIGFSLG 442
+ L W+ N GGN R+ LIG S G
Sbjct: 179 LKDQSMALRWVSENIEWFGGNPKRITLIGLSAG 211
>AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin
preprohormone protein.
Length = 107
Score = 22.2 bits (45), Expect = 6.6
Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = -1
Query: 897 TFGCLMARVFLTSLTWKNRPRKTSL--CQGNGANNQYWLFTRRNQNNHQVITNGNVNS 730
T +M + F S W N R TSL A +F +++ GN+N+
Sbjct: 15 TITIVMCQTFTYSHGWTNGKRSTSLEELANRNAIQSDNVFANCELQKLRLLLQGNINN 72
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 22.2 bits (45), Expect = 6.6
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Frame = -1
Query: 705 NLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVP-SVG 529
+LP+ +HG S + + L SD + +++R G +T VP ++G
Sbjct: 121 SLPVIFWIHGGAFQFGSGIPMGAK--YLMDSDVIFVTINYRLGILGFLSTEDEVVPGNMG 178
Query: 528 -QFLGNFLVWLINN---GGGNWGRVHLIGFSLG 442
+ L W+ N GGN R+ LIG S G
Sbjct: 179 LKDQSMALRWVSENIEWFGGNPKRITLIGLSAG 211
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 292,593
Number of Sequences: 438
Number of extensions: 7980
Number of successful extensions: 53
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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