Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18a10r
(878 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0293 + 29031318-29031812,29032096-29032158,29032365-290324... 31 1.6
11_01_0375 - 2855714-2855914,2856009-2856161,2856644-2856775,285... 30 2.1
10_06_0179 - 11508235-11508245,11508555-11508942 30 2.8
01_01_0361 + 2838979-2841745,2841897-2842285 30 2.8
01_01_0025 + 188915-189132,190625-190705,191350-191506,191958-19... 29 3.7
02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715 29 4.9
02_03_0258 - 16930027-16930485,16930686-16930991 29 4.9
12_02_0761 - 22901121-22901917,22902111-22902707,22904282-229043... 29 6.5
10_05_0104 + 9190779-9191847,9192544-9193332,9193652-9194049 29 6.5
09_04_0174 + 15346123-15346207,15346350-15346502,15346623-153467... 29 6.5
05_05_0118 - 22504483-22504566,22504650-22504742,22504852-225049... 29 6.5
12_02_1003 - 25183468-25184010,25184295-25184551,25184795-251849... 28 8.6
12_02_0412 - 18799217-18801061 28 8.6
12_01_0915 - 8908643-8908756,8909086-8909203,8909570-8909682,891... 28 8.6
11_03_0063 + 9515666-9516656,9517503-9518599 28 8.6
08_02_0005 + 11190901-11191896 28 8.6
04_04_0775 - 27989704-27990281,27990407-27990653,27990743-279908... 28 8.6
02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196 28 8.6
01_01_0100 - 755894-756662,757086-757598,758718-761050 28 8.6
>05_07_0293 +
29031318-29031812,29032096-29032158,29032365-29032490,
29032783-29032911,29033161-29033311,29033853-29033962,
29034502-29034607,29034697-29034894,29034988-29035030,
29035129-29035207
Length = 499
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +3
Query: 429 LWYLSMATSRLTSVIIDSKSCVSDNSFILLHNDWMNHDPSTSC 557
LW LS+ SR ++ + + + D + ++ + D +NH P +C
Sbjct: 290 LWALSIVQSRSVNLKLRMGAFLQDANVLVPYADMLNHSPDANC 332
>11_01_0375 -
2855714-2855914,2856009-2856161,2856644-2856775,
2856875-2857071,2858506-2858590
Length = 255
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/75 (21%), Positives = 30/75 (40%)
Frame = -2
Query: 289 ISESSKNEVLDESTPDTNLLVQCGQCTCYLDHFLYMKSCLEYYLEVRPDDETALNFLKVA 110
IS+ + VL + D + C + ++ K+ EY+ P ET +
Sbjct: 175 ISQGYRQSVLTKPLCDMTIAALIVNCVLFAARYIGPKTIKEYFFPPSPPTETRQEYFTRT 234
Query: 109 NTFQHLDEFNSSKEQ 65
H D+F S+ ++
Sbjct: 235 LALLHKDDFPSAVQR 249
>10_06_0179 - 11508235-11508245,11508555-11508942
Length = 132
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +1
Query: 538 MIRRLRACVMVSRSKNCAISAYPLQLATRKAPSLRPSPSLAFPT*KLPHPASPLCPCMPV 717
++ L A + ++S + A PL + AP L P P+ PT P P + P P
Sbjct: 13 LVAILSAVAVTAQSPSAAPKMAPLPPPPKMAP-LPPPPAAKAPTASAPSPVTAASPPAPP 71
Query: 718 LSRTS 732
+S S
Sbjct: 72 MSPAS 76
>01_01_0361 + 2838979-2841745,2841897-2842285
Length = 1051
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -2
Query: 532 IQSLCSKINELSETHDLESIITEVKREVAIDRY-HKEFNRRTSE--YDINKQMPVITSTL 362
I + CS IN + H+ ++++ E ++D + H TS +++++ + L
Sbjct: 796 IITCCSSINP--QGHEFKALVFEYMPNGSLDGWLHPVSGNPTSSNTLSLSQRLGIAVDIL 853
Query: 361 IRKLYLRKYMDPPVSQCLIKPT 296
YL + PP+ C +KP+
Sbjct: 854 DALDYLHNHCQPPIIHCDLKPS 875
>01_01_0025 +
188915-189132,190625-190705,191350-191506,191958-192161,
192248-192356,192401-192496,192724-193994,194200-194384,
194619-195055,197034-197077,197830-199036,199253-199479
Length = 1411
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = -2
Query: 523 LCSK--INELSETHDLESIITEVKREVAIDRYHKEFNRRTSEYDINKQMPVITSTLIRKL 350
+C K I +T +L ++ + + + + N+ TSE+D + + +I +
Sbjct: 222 VCGKAPIVHFVDTSELSKLVLAAESSLHSSSWEMQANKITSEHDYSGRF-IIDLQWVS-- 278
Query: 349 YLRKYMDPPVSQCLIKPTPAISESSKNEV 263
R Y PV+ CLIK + +S ++V
Sbjct: 279 --RDYQQLPVNSCLIKELARLDDSDCSKV 305
>02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715
Length = 1536
Score = 29.1 bits (62), Expect = 4.9
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Frame = -2
Query: 421 NRRTSEYDINKQMPVITSTLIRKLYLRKYMDPPVSQCLIKPTPAISESSKNEVLDESTPD 242
NRR+ + N + PV + + L ++ P S +K +P IS SSK + +
Sbjct: 398 NRRSGSSEPNLKSPVSQLSSSKALTVK----PGASDTTVKSSPLISGSSKLQHIQPGNAV 453
Query: 241 TNLLVQ-C----GQCTCYLDHFLYMKSC 173
TNL Q C G C+ L KSC
Sbjct: 454 TNLKEQPCKSSGGTCSPELHTVKEEKSC 481
>02_03_0258 - 16930027-16930485,16930686-16930991
Length = 254
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -1
Query: 707 QGQRGDAGCGSFQVGKAKEGLGRRLGALRVAN*SGYADIAQFLLRETITQARSR 546
QG+ GDAG G + + K LGRR+ A + G + + E T AR R
Sbjct: 172 QGE-GDAGAGGWGGRRIKATLGRRISAAAAVDTEGIEAVVERKTGERGTLARLR 224
>12_02_0761 -
22901121-22901917,22902111-22902707,22904282-22904358,
22906543-22907135,22907552-22908118,22908431-22908958,
22909115-22909432,22910622-22910656,22910986-22911301
Length = 1275
Score = 28.7 bits (61), Expect = 6.5
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = -2
Query: 661 KLRKDLDEDLEPYVLPIEADMLILHSSYSGKPSHRHEVDGSWFIQSLCSKINELSETHDL 482
KL + + +LE L +EA +L+ SY G P H I KI+ HD+
Sbjct: 169 KLNEHISAELETN-LELEAIRAVLNISYDGLPYHLKSCFLYLSIFPQDDKISRKRLVHDI 227
Query: 481 --ESIITEVKREVAIDRYHKEFNRRTSEYDINKQMPVITST 365
E I++ K E + R E RR +D + + + S+
Sbjct: 228 MREIAISKSKEENLVLRL--EGGRRLHNHDTVRHLSITNSS 266
>10_05_0104 + 9190779-9191847,9192544-9193332,9193652-9194049
Length = 751
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/65 (21%), Positives = 33/65 (50%)
Frame = -2
Query: 490 HDLESIITEVKREVAIDRYHKEFNRRTSEYDINKQMPVITSTLIRKLYLRKYMDPPVSQC 311
++ ++I+ E ++D + K N+ + +++ +I YL +++PP+ C
Sbjct: 509 NEFKAIVLEFISNRSLDTWLKTGNK-VGTLSLIQRLNIILDVAQALEYLHNHIEPPIVHC 567
Query: 310 LIKPT 296
IKP+
Sbjct: 568 DIKPS 572
>09_04_0174 +
15346123-15346207,15346350-15346502,15346623-15346759,
15346856-15347005,15347405-15347506,15347832-15347996,
15348402-15348499,15348704-15348827,15349056-15349145,
15349555-15349599,15350438-15350833
Length = 514
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = -2
Query: 226 QCGQCTCYLDHFLYMKSCL-----EYYLEVRPDDETALNFLKVANTFQHLDEFNSSKEQM 62
Q Q +D F + ++CL +++++ R + + + + V + QH+ ++
Sbjct: 194 QARQLVGLMDVFCFSEACLLADIVQHFVDARLEFDASYVYEDVNQSIQHVHRSGLIHRKI 253
Query: 61 VTAISKYLMKNAEGMHF 11
++ KYL+KN E HF
Sbjct: 254 LSEPQKYLIKNDE--HF 268
>05_05_0118 -
22504483-22504566,22504650-22504742,22504852-22504914,
22505048-22505145,22505378-22505478,22505581-22505653,
22505872-22505910,22506946-22507018
Length = 207
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 303 LIKHWLTGGSMYFLRYNFLMSVEVITGICLLMSYSD 410
LIK L G S+++ + L S++ + CLL+ +SD
Sbjct: 15 LIKLLLIGDSVFYKLFLVLSSIQCVGKSCLLLRFSD 50
>12_02_1003 -
25183468-25184010,25184295-25184551,25184795-25184971,
25185438-25185905,25186720-25186730,25187589-25187599
Length = 488
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 172 NSFSCKENDLNSKYIVRIGPINLYPE 249
N+ CK N +N +YI++ PI P+
Sbjct: 98 NAIECKINIINPEYIIKTSPIEATPK 123
>12_02_0412 - 18799217-18801061
Length = 614
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 208 CYLDHFLYMKSCLEYYLEVRPDDET 134
CY D L +++CL Y RP+DET
Sbjct: 90 CYSDLSLPVRTCLLYLSIFRPEDET 114
>12_01_0915 -
8908643-8908756,8909086-8909203,8909570-8909682,
8911138-8911218,8911307-8911357,8912173-8912232,
8913353-8913419,8913509-8913759
Length = 284
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = -2
Query: 187 YMKSCLEYYLEVRPDDETALNFLKVANTFQHLDEFNSSKEQMVTAIS 47
Y K L+++ + PD E+ F+K+AN ++ L + S++ Q AI+
Sbjct: 77 YYKLSLKHHPDKNPDPESRKLFVKIANAYEILKD-ESTRGQYDYAIA 122
>11_03_0063 + 9515666-9516656,9517503-9518599
Length = 695
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 172 NSFSCKENDLNSKYIVRIGPINLYPE 249
N+ CK N +N +YI++ PI P+
Sbjct: 561 NAIECKINIINPEYIIKTSPIEATPK 586
>08_02_0005 + 11190901-11191896
Length = 331
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 172 NSFSCKENDLNSKYIVRIGPINLYPE 249
N+ CK N +N +YI++ PI P+
Sbjct: 166 NAIECKINIINPEYIIKTSPIEATPK 191
>04_04_0775 -
27989704-27990281,27990407-27990653,27990743-27990837,
27990918-27992388,27993142-27993194,27993295-27993430
Length = 859
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -2
Query: 283 ESSKNEVLDESTPDTNLLVQCGQCTCYLDHFLYMKSCLE 167
ESS+ +D S DT++L + G C D +++ C+E
Sbjct: 723 ESSEIWYVDGSLLDTSVLAEVGTLYCLTDDAVFLFDCVE 761
>02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196
Length = 933
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 172 NSFSCKENDLNSKYIVRIGPINLYPE 249
N+ CK N +N +YI++ PI P+
Sbjct: 335 NAIECKINIINPEYIIKTSPIEATPK 360
>01_01_0100 - 755894-756662,757086-757598,758718-761050
Length = 1204
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 172 NSFSCKENDLNSKYIVRIGPINLYPE 249
N+ CK N +N +YI++ PI P+
Sbjct: 898 NAIECKINIINPEYIIKTSPIEATPK 923
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,533,117
Number of Sequences: 37544
Number of extensions: 512212
Number of successful extensions: 1507
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1507
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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