Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18a10r
         (878 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    25   0.92 
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              22   8.6  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   8.6  

>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 862 CIGIAVLTHGSSDGMLRAKDMQYSEKEILRHFKVHD 755
           C  +  L  G+  G+L     +Y    I +H K+HD
Sbjct: 292 CQPVGTLIVGALAGLLSVLGYKYITPLIQKHLKIHD 327


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 714 CIIKNFGFVTKNGL 755
           CI+KNF  + KN +
Sbjct: 65  CILKNFNILDKNNV 78


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +3

Query: 372 VITGICLLMSYSDVLLLNSLWY 437
           ++T  CLL++ S +  +++ WY
Sbjct: 6   IVTVACLLLAASPIDCVDANWY 27


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,188
Number of Sequences: 438
Number of extensions: 5603
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)