Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18a08r
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21324-13|AAA62558.1|  357|Caenorhabditis elegans Hypothetical p...    55   6e-08
Z68298-3|CAA92600.2|  357|Caenorhabditis elegans Hypothetical pr...    54   1e-07
Z74033-4|CAA98471.2|  822|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z37139-3|CAA85492.2|  793|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AB095019-1|BAC22611.1|  822|Caenorhabditis elegans ubiquitin-spe...    31   1.1  
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr...    29   5.7  
AL031624-3|CAA20939.1|  416|Caenorhabditis elegans Hypothetical ...    28   7.5  
Z81115-3|CAB03293.2|  486|Caenorhabditis elegans Hypothetical pr...    28   10.0 

>U21324-13|AAA62558.1|  357|Caenorhabditis elegans Hypothetical
           protein C35D10.2 protein.
          Length = 357

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 19/60 (31%), Positives = 38/60 (63%)
 Frame = -1

Query: 861 LLESFMGINDSELASQMWDLAEGKQNSMELAEAIDNSDLQEFGFTDEFIIELWGVITDAR 682
           + + ++G+ D +LA ++W+ A   +  ++L+EAI  S+L  F F D  + ++WG+I D +
Sbjct: 272 IFDQYLGVQDDQLAMRIWETASNCETLLQLSEAIKESELSMFDFPDGMVFDMWGIIGDLK 331


>Z68298-3|CAA92600.2|  357|Caenorhabditis elegans Hypothetical
           protein F44D12.4 protein.
          Length = 357

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 20/60 (33%), Positives = 37/60 (61%)
 Frame = -1

Query: 861 LLESFMGINDSELASQMWDLAEGKQNSMELAEAIDNSDLQEFGFTDEFIIELWGVITDAR 682
           L + ++G+ D +LA ++W+ A   +   +L+EAI  S+L  F F D  + ++WG+I D +
Sbjct: 272 LFDQYLGVQDDQLAMRIWETASNCETLWQLSEAIKQSELSMFEFPDGLVFDMWGIIGDLK 331


>Z74033-4|CAA98471.2|  822|Caenorhabditis elegans Hypothetical
           protein F38B7.5 protein.
          Length = 822

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/53 (35%), Positives = 30/53 (56%)
 Frame = -1

Query: 810 WDLAEGKQNSMELAEAIDNSDLQEFGFTDEFIIELWGVITDARSGRLS*NTKT 652
           +DL + +QN  ++ E  +N D Q+     EF++ L G + DA  G +S N KT
Sbjct: 302 YDLLQYRQNVGKINEEFNNDDQQD---AHEFLLTLIGAVDDA-MGVMSKNVKT 350


>Z37139-3|CAA85492.2|  793|Caenorhabditis elegans Hypothetical
           protein C14B1.6 protein.
          Length = 793

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +1

Query: 721 FICKTKFLKIAVIDSLCEFHRILFSFGKIPHLRCQ 825
           F   T++L   ++D+  EFH I+F+FG  P  + Q
Sbjct: 624 FEAMTEYLTELLLDNTIEFHTIIFAFGGTPTFKKQ 658


>AB095019-1|BAC22611.1|  822|Caenorhabditis elegans
           ubiquitin-specific protease protein.
          Length = 822

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/53 (35%), Positives = 30/53 (56%)
 Frame = -1

Query: 810 WDLAEGKQNSMELAEAIDNSDLQEFGFTDEFIIELWGVITDARSGRLS*NTKT 652
           +DL + +QN  ++ E  +N D Q+     EF++ L G + DA  G +S N KT
Sbjct: 302 YDLLQYRQNVGKINEEFNNDDQQD---AHEFLLTLIGAVDDA-MGVMSKNVKT 350


>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
            F54B3.1b protein.
          Length = 3394

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = -3

Query: 538  IYFIITKLTNAFRYDL*INKNVILNNYRYL 449
            ++ +I +L + ++YDL ++KN++   Y YL
Sbjct: 3200 VFHLIERLLDYYQYDLILSKNLVAIKYLYL 3229


>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
            F54B3.1a protein.
          Length = 3396

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = -3

Query: 538  IYFIITKLTNAFRYDL*INKNVILNNYRYL 449
            ++ +I +L + ++YDL ++KN++   Y YL
Sbjct: 3202 VFHLIERLLDYYQYDLILSKNLVAIKYLYL 3231


>AL031624-3|CAA20939.1|  416|Caenorhabditis elegans Hypothetical
           protein H16D19.4 protein.
          Length = 416

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -1

Query: 759 DNSDLQEFGFTDEFIIELWGVITDAR 682
           +N +L  FGF  +F+++ +G + DAR
Sbjct: 108 ENGELTPFGFDRKFLLQTYGRLCDAR 133


>Z81115-3|CAB03293.2|  486|Caenorhabditis elegans Hypothetical
           protein T05D4.3 protein.
          Length = 486

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/44 (29%), Positives = 28/44 (63%)
 Frame = +2

Query: 164 VIHMYF*IAPINALSKNSVGIDYRLIIIINHRYTNTAHLLQRHA 295
           +I   F ++PI+ LS +S+G    L+++ N+R  + ++ ++R A
Sbjct: 442 LIVFVFCVSPISTLSASSIGSTNSLLLLDNNRNPSGSNRVERTA 485


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,435,608
Number of Sequences: 27780
Number of extensions: 373289
Number of successful extensions: 752
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)