Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18a05r
(808 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 97 1e-20
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 79 4e-15
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 61 1e-09
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 31 1.3
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 29 5.2
Z70756-9|CAA94797.1| 275|Caenorhabditis elegans Hypothetical pr... 29 5.2
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl... 29 5.2
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 28 9.0
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 28 9.0
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 97.1 bits (231), Expect = 1e-20
Identities = 72/218 (33%), Positives = 107/218 (49%), Gaps = 7/218 (3%)
Frame = -3
Query: 728 TNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGR 549
T R+IGGS ++ + +P LL ++ CGG++++ +L+AAHC D
Sbjct: 53 TLDHRLIGGSESSPHSWPWTVQLLSRLGHHR----CGGSLIDPNFVLTAAHCFAKDRRPT 108
Query: 548 -WRIRVGSTFANSGGVVHNVNRIIIHPNYNRRTADS-DLCILRSNSNIAYNNNVRPINIA 375
+ +RVG + SG H V + IHP YN S D I+R + + + RPI +
Sbjct: 109 SYSVRVGGHRSGSGSP-HRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICLP 167
Query: 374 GANYNLGDNQVVWAAGWGATSLGGS-NSEQLRHVQVWTINQNACVQRYRPINRAITANML 198
+ +N++ GWG+T G S ++ LR + V ++ C I R +ML
Sbjct: 168 --SLPAVENRLCVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSML 225
Query: 197 CSGVLDVGGRDQCQGDSGGPLLHNR----VLVGVCSWG 96
C+G G D CQGDSGGPL+ R L GV SWG
Sbjct: 226 CAGY-SYGKIDSCQGDSGGPLMCARDGHWELTGVVSWG 262
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 79.0 bits (186), Expect = 4e-15
Identities = 66/217 (30%), Positives = 102/217 (47%), Gaps = 10/217 (4%)
Frame = -3
Query: 716 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDA-TGRWRI 540
R++GG T +P AAL N CG +IL++ +++AAHC D + +
Sbjct: 26 RVVGGFETVPGAFPWTAALR---NKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEV 82
Query: 539 RVGSTFANS---GGVVHNVNRIIIHPNYNRRTADSDLCILR-SNSNIAYNNNVRPINIAG 372
VG N + + RI +P Y + D+ IL I +N +PI +
Sbjct: 83 VVGDWDNNQTDGNEQIFYLQRIHFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQPICLPS 141
Query: 371 ANYNLGDNQVVWAAGWGATSLGGSNSEQLRHVQVWTINQNACVQRYRPINRAITANMLCS 192
++ + +GWG S+G +E+L+ + IN+ CV + I +++ + C+
Sbjct: 142 KDFVYTPGRQCVVSGWG--SMGLRYAERLQAALIPIINRFDCVNSSQ-IYSSMSRSAFCA 198
Query: 191 GVLDVGGRDQCQGDSGGPLLHNR-----VLVGVCSWG 96
G L+ GG D CQGDSGGP R VL GV SWG
Sbjct: 199 GYLE-GGIDSCQGDSGGPFACRREDGAFVLAGVISWG 234
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 60.9 bits (141), Expect = 1e-09
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 16/223 (7%)
Frame = -3
Query: 716 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 537
RIIGG++ I+ A L ++ N CG +++ +++AAHC T R +
Sbjct: 37 RIIGGNS--IDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQT-RSFVY 93
Query: 536 VGSTFANSGGVVHNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNL 357
V N+ +V IH YN +TAD+D+ +LR +S+++ ++P+ + + L
Sbjct: 94 VREP-KNNRERSFSVKEAYIHSGYNNQTADNDIALLRISSDLS-KLGIKPVCLVHDDSKL 151
Query: 356 ---GDNQVVWAAG--WGATSLGGS---NSEQLRHVQVWTINQNACVQRYR---PINRAIT 210
N VV G G S G NS+ L+ V I+ + CV+ +R ++ IT
Sbjct: 152 LKQYKNGVVIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSVKIT 211
Query: 209 ANMLCSGVLDVGGRDQCQGDSGGPLLHNR-----VLVGVCSWG 96
+C+G G GDSGGPLL ++ V +G+ S+G
Sbjct: 212 GYQICAGAYLHG---TAPGDSGGPLLIHKSNGEYVQIGITSYG 251
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +3
Query: 444 TVSSTSVIVGMNDNSVHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGTKDRSLVKDVSTT 623
T ++T +I G +V T TV GT T PT + T ++GT ++ + +TT
Sbjct: 205 TTTTTVLINGTTTTTVPTNETTTTVPLNGTTTTVPTNETTTTSPLNGTTTTTVPINGATT 264
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 29.5 bits (63), Expect = 3.0
Identities = 26/118 (22%), Positives = 40/118 (33%), Gaps = 3/118 (2%)
Frame = +3
Query: 372 TSNINRTNVVVISYVGITA*DAEVTVSSTSVIVGMNDNSVHVMHNTPTVGKGGTNTNTPT 551
T++ T + IT EVT ++ V + T T T T TPT
Sbjct: 29 TADPTTTTTEATTTTEITTTTEEVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTTTTTPT 88
Query: 552 ACSVTVWTVSGTKDRSLVKDVSTTRXXXXXXXXCIQQSSYTGI---LVNVGRGATNNP 716
+ T T + T + +TT ++ V++G G NNP
Sbjct: 89 TTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMPPCNPNAVSLGMGDANNP 146
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 28.7 bits (61), Expect = 5.2
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 2/104 (1%)
Frame = +3
Query: 309 ERCSTPTSSPNNLVITKIVIGTSNINRTNVV--VISYVGITA*DAEVTVSSTSVIVGMND 482
E T++P T I TS+ T+ V++ +T+ T +ST
Sbjct: 256 ETTKPTTTTPTTTTTTTIPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTSTSTPT------ 309
Query: 483 NSVHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGTKDRSLVKDV 614
+ + TP+ T T+T T S + T+S TK + D+
Sbjct: 310 TTTTMQTTTPSTTSTPTTTSTTTTTSASTTTISTTKPPTTQIDI 353
>Z70756-9|CAA94797.1| 275|Caenorhabditis elegans Hypothetical
protein T06E4.11 protein.
Length = 275
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +1
Query: 31 PRGETGNANVNTRVSDGQRRYCPQEQTPTRTRLWRRGPPESPWHWSRPPTSKTP 192
P+G T + +V G Y +Q P + + + PP+ P +++PP + P
Sbjct: 36 PQGYTQGYQDSAQVPQG---YPQSQQAPQAPQGYPQQPPQDPTQYAQPPQQQQP 86
>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
protein 2 protein.
Length = 1080
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 464 NRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNL 357
N AD D L ++ YNNN+R N+A N NL
Sbjct: 913 NESEADYDDIYLEKQNSGKYNNNIRHGNMAFRNANL 948
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 689 INQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 573
IN Y + + TW+ + C G + + R IL+A HC
Sbjct: 58 INTYTNVKNIDETWS-----KHCSGTLTSPRHILTATHC 91
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 626 SCGGNILNQRSILSAAHCPYG-DATGRWRIRVGSTFANS 513
+C G I++ R IL A HC G + G W + + TF S
Sbjct: 192 TCTGTIVSPRHILIATHCFAGQNRDGSWNL-IEDTFDRS 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,802,709
Number of Sequences: 27780
Number of extensions: 470799
Number of successful extensions: 1446
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1437
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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