Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17p22f
         (737 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118980-1|AAM50840.1|  219|Drosophila melanogaster LP01886p pro...   206   3e-53
AE014297-2773|AAF55752.2|  219|Drosophila melanogaster CG4367-PA...   206   3e-53
AY119122-1|AAM50982.1|  304|Drosophila melanogaster RE24790p pro...   202   4e-52
AE014298-712|AAF46012.2|  285|Drosophila melanogaster CG15786-PA...   202   4e-52
BT011531-1|AAS15667.1|  233|Drosophila melanogaster LP24064p pro...   178   7e-45
AE014297-2774|AAF55754.1|  233|Drosophila melanogaster CG4362-PA...   178   7e-45
X98766-1|CAA67304.1|  544|Drosophila melanogaster H15 protein pr...    30   3.8  
BT022140-1|AAY51535.1|  660|Drosophila melanogaster IP01538p pro...    30   3.8  
AE014134-917|AAF52249.1|  660|Drosophila melanogaster CG6604-PA ...    30   3.8  
BT024335-1|ABC86397.1|  257|Drosophila melanogaster IP09958p pro...    29   6.6  
AE013599-1467|AAF58524.2|  259|Drosophila melanogaster CG30042-P...    29   6.6  
BT022124-1|AAY51519.1|  882|Drosophila melanogaster IP09048p pro...    29   8.7  
AL031863-5|CAA21319.1|  638|Drosophila melanogaster EG:EG0003.6 ...    29   8.7  
AE014297-2045|AAF55197.2|  943|Drosophila melanogaster CG6118-PA...    29   8.7  

>AY118980-1|AAM50840.1|  219|Drosophila melanogaster LP01886p
           protein.
          Length = 219

 Score =  206 bits (502), Expect = 3e-53
 Identities = 93/196 (47%), Positives = 126/196 (64%), Gaps = 3/196 (1%)
 Frame = +3

Query: 96  LAFVALLATVRAHGRVVEPASRASAWRAGFGTRINYDDDGINCGGFHRQWETNNGKCGIC 275
           + F+  +  +  HG ++ P  R+S WR       NYDD+ + CGGF +Q E N+GKCG+C
Sbjct: 1   MGFLNRMGELEGHGMMLSPTGRSSRWRYDNSAPTNYDDNALYCGGFWKQTE-NDGKCGLC 59

Query: 276 GDPYDDSPPRPHELGGAYGNGVIVAKYSSGQVIDTTVEITAYHRGYWEFKLCT-DPSNNE 452
           GD +    PRP+ELGG YG+GVIV  ++     +  V+ITA H GY+ F +C  D + +E
Sbjct: 60  GDDWSLEQPRPNELGGKYGSGVIVKSFAGVDEAEINVKITANHLGYFRFHICDLDENGSE 119

Query: 453 QE-CFEKYLLELEDGGTKYYPKSS-GRYDVRYRLPAGVSCEHCVLQWTYTAGNNWGVCPN 626
            E CF +Y L   DG  KYY  ++ G   V  +LP+ ++C HCVL+WTYTAGNNWGVC +
Sbjct: 120 SEDCFNQYPLNFTDGSQKYYINTTTGDIPVTVKLPSDLNCIHCVLRWTYTAGNNWGVCED 179

Query: 627 GTGALGCGNQETFWAC 674
           GTGA+GCG QETF  C
Sbjct: 180 GTGAMGCGAQETFINC 195


>AE014297-2773|AAF55752.2|  219|Drosophila melanogaster CG4367-PA
           protein.
          Length = 219

 Score =  206 bits (502), Expect = 3e-53
 Identities = 93/196 (47%), Positives = 126/196 (64%), Gaps = 3/196 (1%)
 Frame = +3

Query: 96  LAFVALLATVRAHGRVVEPASRASAWRAGFGTRINYDDDGINCGGFHRQWETNNGKCGIC 275
           + F+  +  +  HG ++ P  R+S WR       NYDD+ + CGGF +Q E N+GKCG+C
Sbjct: 1   MGFLNRMGELEGHGMMLSPTGRSSRWRYDNSAPTNYDDNALYCGGFWKQTE-NDGKCGLC 59

Query: 276 GDPYDDSPPRPHELGGAYGNGVIVAKYSSGQVIDTTVEITAYHRGYWEFKLCT-DPSNNE 452
           GD +    PRP+ELGG YG+GVIV  ++     +  V+ITA H GY+ F +C  D + +E
Sbjct: 60  GDDWSLEQPRPNELGGKYGSGVIVKSFAGVDEAEINVKITANHLGYFRFHICDLDENGSE 119

Query: 453 QE-CFEKYLLELEDGGTKYYPKSS-GRYDVRYRLPAGVSCEHCVLQWTYTAGNNWGVCPN 626
            E CF +Y L   DG  KYY  ++ G   V  +LP+ ++C HCVL+WTYTAGNNWGVC +
Sbjct: 120 SEDCFNQYPLNFTDGSQKYYINTTTGDIPVTVKLPSDLNCIHCVLRWTYTAGNNWGVCED 179

Query: 627 GTGALGCGNQETFWAC 674
           GTGA+GCG QETF  C
Sbjct: 180 GTGAMGCGAQETFINC 195


>AY119122-1|AAM50982.1|  304|Drosophila melanogaster RE24790p
           protein.
          Length = 304

 Score =  202 bits (493), Expect = 4e-52
 Identities = 95/204 (46%), Positives = 127/204 (62%), Gaps = 10/204 (4%)
 Frame = +3

Query: 93  FLAFVALLATVRAHGRVVEPASRASAWRAGFGTRINYDDDGINCGGFHRQWETNNGKCGI 272
           F+  + L+A+VR HGR+++P +R + WR G+   +NY+D+ + CGG+  QWE N G+CGI
Sbjct: 41  FVVLMQLMASVRGHGRLMDPPARNAMWRFGYPNPVNYNDNELFCGGYAVQWEQNKGRCGI 100

Query: 273 CGDPYDDSPPRPHELGGAYGNGVIVAKYSSGQVIDTTVEITAYHRGYWEFKLCTDPSNN- 449
           CGD Y    PRPHE GG Y  G+I   Y++GQ ID  VE+TA H G +E  LC  P+NN 
Sbjct: 101 CGDAYHVKSPRPHEAGGQYAKGIISRYYTAGQTIDVEVELTANHYGRFEMFLC--PNNNP 158

Query: 450 ----EQECFEKYLLELEDGGTKYY--PKSSGRYDV-RY--RLPAGVSCEHCVLQWTYTAG 602
                Q+CF++Y L +       Y  P+ + + D+ RY  RLP  V+C  CVLQWTY   
Sbjct: 159 RQEATQQCFDRYPLLISGSREHRYLIPRDAKKKDIFRYKVRLPPYVTCTQCVLQWTYYTA 218

Query: 603 NNWGVCPNGTGALGCGNQETFWAC 674
           N WG C NGT A+GCG  ETF  C
Sbjct: 219 NMWGTCANGTEAVGCGKAETFRNC 242


>AE014298-712|AAF46012.2|  285|Drosophila melanogaster CG15786-PA
           protein.
          Length = 285

 Score =  202 bits (493), Expect = 4e-52
 Identities = 95/204 (46%), Positives = 127/204 (62%), Gaps = 10/204 (4%)
 Frame = +3

Query: 93  FLAFVALLATVRAHGRVVEPASRASAWRAGFGTRINYDDDGINCGGFHRQWETNNGKCGI 272
           F+  + L+A+VR HGR+++P +R + WR G+   +NY+D+ + CGG+  QWE N G+CGI
Sbjct: 22  FVVLMQLMASVRGHGRLMDPPARNAMWRFGYPNPVNYNDNELFCGGYAVQWEQNKGRCGI 81

Query: 273 CGDPYDDSPPRPHELGGAYGNGVIVAKYSSGQVIDTTVEITAYHRGYWEFKLCTDPSNN- 449
           CGD Y    PRPHE GG Y  G+I   Y++GQ ID  VE+TA H G +E  LC  P+NN 
Sbjct: 82  CGDAYHVKSPRPHEAGGQYAKGIISRYYTAGQTIDVEVELTANHYGRFEMFLC--PNNNP 139

Query: 450 ----EQECFEKYLLELEDGGTKYY--PKSSGRYDV-RY--RLPAGVSCEHCVLQWTYTAG 602
                Q+CF++Y L +       Y  P+ + + D+ RY  RLP  V+C  CVLQWTY   
Sbjct: 140 RQEATQQCFDRYPLLISGSREHRYLIPRDAKKKDIFRYKVRLPPYVTCTQCVLQWTYYTA 199

Query: 603 NNWGVCPNGTGALGCGNQETFWAC 674
           N WG C NGT A+GCG  ETF  C
Sbjct: 200 NMWGTCANGTEAVGCGKAETFRNC 223


>BT011531-1|AAS15667.1|  233|Drosophila melanogaster LP24064p
           protein.
          Length = 233

 Score =  178 bits (433), Expect = 7e-45
 Identities = 90/206 (43%), Positives = 120/206 (58%), Gaps = 9/206 (4%)
 Frame = +3

Query: 84  LSYFLAFVALLAT----VRAHGRVVEPASRASAWRAGFGTRINYDDDGINCGGFHRQWET 251
           + Y L+   LLA     + AHG ++ P SR+S WR       N++D+ + CGG + Q   
Sbjct: 1   MKYLLSMTLLLAIGLQQIDAHGMMLSPPSRSSRWRYDGSAPQNWNDNELFCGGLYTQ-SN 59

Query: 252 NNGKCGICGDPYDDSPPRPHELGGAYGN-GVIVAKYSSGQVIDTTVEITAYHRGYWEFKL 428
           N G+CG+CGD + D+ PR +E+GG+ G  GV+   Y +G  I   V+IT  H GY+EF L
Sbjct: 60  NGGRCGLCGDNFLDAQPRANEIGGSIGGAGVVTRSYVAGNTITVGVKITTNHLGYFEFHL 119

Query: 429 CT-DPSNNE-QECFEKYLLELEDGGT-KYYPKSSGRYDVRYRLPAGVSCEHCVLQWTYTA 599
           C  D    E +ECF++  L   DG   K      G +DV   LP G++C HCVL+WTY  
Sbjct: 120 CNLDAFGAESEECFDQNRLRFIDGSDRKDIGDQMGEFDVTVVLPEGLTCSHCVLRWTYVG 179

Query: 600 GNNWGVCPN-GTGALGCGNQETFWAC 674
            NNWG+C N G GALGCG QETF  C
Sbjct: 180 ANNWGICDNSGNGALGCGPQETFKNC 205


>AE014297-2774|AAF55754.1|  233|Drosophila melanogaster CG4362-PA
           protein.
          Length = 233

 Score =  178 bits (433), Expect = 7e-45
 Identities = 90/206 (43%), Positives = 120/206 (58%), Gaps = 9/206 (4%)
 Frame = +3

Query: 84  LSYFLAFVALLAT----VRAHGRVVEPASRASAWRAGFGTRINYDDDGINCGGFHRQWET 251
           + Y L+   LLA     + AHG ++ P SR+S WR       N++D+ + CGG + Q   
Sbjct: 1   MKYLLSMTLLLAIGLQQIDAHGMMLSPPSRSSRWRYDGSAPQNWNDNELFCGGLYTQ-SN 59

Query: 252 NNGKCGICGDPYDDSPPRPHELGGAYGN-GVIVAKYSSGQVIDTTVEITAYHRGYWEFKL 428
           N G+CG+CGD + D+ PR +E+GG+ G  GV+   Y +G  I   V+IT  H GY+EF L
Sbjct: 60  NGGRCGLCGDNFLDAQPRANEIGGSIGGAGVVTRSYVAGNTITVGVKITTNHLGYFEFHL 119

Query: 429 CT-DPSNNE-QECFEKYLLELEDGGT-KYYPKSSGRYDVRYRLPAGVSCEHCVLQWTYTA 599
           C  D    E +ECF++  L   DG   K      G +DV   LP G++C HCVL+WTY  
Sbjct: 120 CNLDAFGAESEECFDQNRLRFIDGSDRKDIGDQMGEFDVTVVLPEGLTCSHCVLRWTYVG 179

Query: 600 GNNWGVCPN-GTGALGCGNQETFWAC 674
            NNWG+C N G GALGCG QETF  C
Sbjct: 180 ANNWGICDNSGNGALGCGPQETFKNC 205


>X98766-1|CAA67304.1|  544|Drosophila melanogaster H15 protein
           protein.
          Length = 544

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 16/54 (29%), Positives = 21/54 (38%)
 Frame = -2

Query: 364 PEEYFATMTPLP*APPNSCGRGGESSYGSPQMPHFPLLVSH*RWKPPQLMPSSS 203
           P    A   P P  P +SCG         PQ+ H+P   S  +    Q  P +S
Sbjct: 485 PPPSMAVAPPAPATPTSSCGSASPDLRARPQLNHYPQRFSPYQVPQHQASPPAS 538


>BT022140-1|AAY51535.1|  660|Drosophila melanogaster IP01538p
           protein.
          Length = 660

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 16/54 (29%), Positives = 21/54 (38%)
 Frame = -2

Query: 364 PEEYFATMTPLP*APPNSCGRGGESSYGSPQMPHFPLLVSH*RWKPPQLMPSSS 203
           P    A   P P  P +SCG         PQ+ H+P   S  +    Q  P +S
Sbjct: 601 PPPSMAVAPPAPATPTSSCGSASPDLRARPQLNHYPQRFSPYQVPQHQASPPAS 654


>AE014134-917|AAF52249.1|  660|Drosophila melanogaster CG6604-PA
           protein.
          Length = 660

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 16/54 (29%), Positives = 21/54 (38%)
 Frame = -2

Query: 364 PEEYFATMTPLP*APPNSCGRGGESSYGSPQMPHFPLLVSH*RWKPPQLMPSSS 203
           P    A   P P  P +SCG         PQ+ H+P   S  +    Q  P +S
Sbjct: 601 PPPSMAVAPPAPATPTSSCGSASPDLRARPQLNHYPQRFSPYQVPQHQASPPAS 654


>BT024335-1|ABC86397.1|  257|Drosophila melanogaster IP09958p
           protein.
          Length = 257

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +3

Query: 150 PASRASAWRAGFGTRINYDDDGINCGGFHRQWETNNGKCG 269
           P  R +    G G  I   +D +   G+H  WET NG  G
Sbjct: 145 PKGRGTG-EGGNGWAIIRQEDDVEVDGYHYLWETENGILG 183


>AE013599-1467|AAF58524.2|  259|Drosophila melanogaster CG30042-PA
           protein.
          Length = 259

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +3

Query: 150 PASRASAWRAGFGTRINYDDDGINCGGFHRQWETNNGKCG 269
           P  R +    G G  I   +D +   G+H  WET NG  G
Sbjct: 147 PKGRGTG-EGGNGWAIIRQEDDVEVDGYHYLWETENGILG 185


>BT022124-1|AAY51519.1|  882|Drosophila melanogaster IP09048p
           protein.
          Length = 882

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +3

Query: 198 NYDDDGINCGGFHRQWETNNGKCGICGDPYDDSPPRPHELGGAYGNGVIVA 350
           N  DD +   GF R+++ NN   G+  D   DS     + GG   NG+ +A
Sbjct: 730 NGHDDEMAGAGFDRKYDDNNNNSGL--DMETDSNNNNSKPGGDNNNGLALA 778


>AL031863-5|CAA21319.1|  638|Drosophila melanogaster EG:EG0003.6
           protein.
          Length = 638

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -1

Query: 350 RNDDAITVGTAQLVRPRRRIVVWIATNAAFSIISFPL 240
           RNDD+ +     ++RP     +W+    A+S I  P+
Sbjct: 413 RNDDSESGSDVSILRPETMRTIWLICRFAYSTILLPI 449


>AE014297-2045|AAF55197.2|  943|Drosophila melanogaster CG6118-PA
           protein.
          Length = 943

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +3

Query: 198 NYDDDGINCGGFHRQWETNNGKCGICGDPYDDSPPRPHELGGAYGNGVIVA 350
           N  DD +   GF R+++ NN   G+  D   DS     + GG   NG+ +A
Sbjct: 791 NGHDDEMAGAGFDRKYDDNNNNSGL--DMETDSNNNNSKPGGDNNNGLALA 839


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,266,487
Number of Sequences: 53049
Number of extensions: 958230
Number of successful extensions: 3298
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3278
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)