Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17o24f
(734 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein pr... 41 0.004
BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha f... 41 0.004
BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-indu... 41 0.004
BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha f... 41 0.004
BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-indu... 41 0.004
BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-indu... 41 0.004
BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-indu... 41 0.004
BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-indu... 41 0.004
BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-indu... 41 0.004
BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-indu... 41 0.004
BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-indu... 41 0.004
BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein. 41 0.004
AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane... 41 0.004
>BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein
protein.
Length = 161
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +3
Query: 153 NPPPYNNQIQTDLYHVGPXVPTQQFITVQAP-QMGPKSVRYTCPSCRASIKTRVEYVSAT 329
NPP Y Q + + P T Q + VQ P + ++ CPSC I +++ Y +
Sbjct: 57 NPPSYYTQ-PAPIPNNNPI--TVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGA 113
Query: 330 KTHXXXXXXXXXXXXXXX-XIPYCGKSCRNATHYCPNCSA 446
T IP+C + ++ HYCPNC A
Sbjct: 114 LTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
>BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +3
Query: 153 NPPPYNNQIQTDLYHVGPXVPTQQFITVQAP-QMGPKSVRYTCPSCRASIKTRVEYVSAT 329
NPP Y Q + + P T Q + VQ P + ++ CPSC I +++ Y +
Sbjct: 57 NPPSYYTQ-PAPIPNNNPI--TVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGA 113
Query: 330 KTHXXXXXXXXXXXXXXX-XIPYCGKSCRNATHYCPNCSA 446
T IP+C + ++ HYCPNC A
Sbjct: 114 LTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
>BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +3
Query: 153 NPPPYNNQIQTDLYHVGPXVPTQQFITVQAP-QMGPKSVRYTCPSCRASIKTRVEYVSAT 329
NPP Y Q + + P T Q + VQ P + ++ CPSC I +++ Y +
Sbjct: 57 NPPSYYTQ-PAPIPNNNPI--TVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGA 113
Query: 330 KTHXXXXXXXXXXXXXXX-XIPYCGKSCRNATHYCPNCSA 446
T IP+C + ++ HYCPNC A
Sbjct: 114 LTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
>BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +3
Query: 153 NPPPYNNQIQTDLYHVGPXVPTQQFITVQAP-QMGPKSVRYTCPSCRASIKTRVEYVSAT 329
NPP Y Q + + P T Q + VQ P + ++ CPSC I +++ Y +
Sbjct: 57 NPPSYYTQ-PAPIPNNNPI--TVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGA 113
Query: 330 KTHXXXXXXXXXXXXXXX-XIPYCGKSCRNATHYCPNCSA 446
T IP+C + ++ HYCPNC A
Sbjct: 114 LTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
>BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +3
Query: 153 NPPPYNNQIQTDLYHVGPXVPTQQFITVQAP-QMGPKSVRYTCPSCRASIKTRVEYVSAT 329
NPP Y Q + + P T Q + VQ P + ++ CPSC I +++ Y +
Sbjct: 57 NPPSYYTQ-PAPIPNNNPI--TVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGA 113
Query: 330 KTHXXXXXXXXXXXXXXX-XIPYCGKSCRNATHYCPNCSA 446
T IP+C + ++ HYCPNC A
Sbjct: 114 LTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
>BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +3
Query: 153 NPPPYNNQIQTDLYHVGPXVPTQQFITVQAP-QMGPKSVRYTCPSCRASIKTRVEYVSAT 329
NPP Y Q + + P T Q + VQ P + ++ CPSC I +++ Y +
Sbjct: 57 NPPSYYTQ-PAPIPNNNPI--TVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGA 113
Query: 330 KTHXXXXXXXXXXXXXXX-XIPYCGKSCRNATHYCPNCSA 446
T IP+C + ++ HYCPNC A
Sbjct: 114 LTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
>BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +3
Query: 153 NPPPYNNQIQTDLYHVGPXVPTQQFITVQAP-QMGPKSVRYTCPSCRASIKTRVEYVSAT 329
NPP Y Q + + P T Q + VQ P + ++ CPSC I +++ Y +
Sbjct: 57 NPPSYYTQ-PAPIPNNNPI--TVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGA 113
Query: 330 KTHXXXXXXXXXXXXXXX-XIPYCGKSCRNATHYCPNCSA 446
T IP+C + ++ HYCPNC A
Sbjct: 114 LTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
>BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +3
Query: 153 NPPPYNNQIQTDLYHVGPXVPTQQFITVQAP-QMGPKSVRYTCPSCRASIKTRVEYVSAT 329
NPP Y Q + + P T Q + VQ P + ++ CPSC I +++ Y +
Sbjct: 57 NPPSYYTQ-PAPIPNNNPI--TVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGA 113
Query: 330 KTHXXXXXXXXXXXXXXX-XIPYCGKSCRNATHYCPNCSA 446
T IP+C + ++ HYCPNC A
Sbjct: 114 LTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
>BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +3
Query: 153 NPPPYNNQIQTDLYHVGPXVPTQQFITVQAP-QMGPKSVRYTCPSCRASIKTRVEYVSAT 329
NPP Y Q + + P T Q + VQ P + ++ CPSC I +++ Y +
Sbjct: 57 NPPSYYTQ-PAPIPNNNPI--TVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGA 113
Query: 330 KTHXXXXXXXXXXXXXXX-XIPYCGKSCRNATHYCPNCSA 446
T IP+C + ++ HYCPNC A
Sbjct: 114 LTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
>BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +3
Query: 153 NPPPYNNQIQTDLYHVGPXVPTQQFITVQAP-QMGPKSVRYTCPSCRASIKTRVEYVSAT 329
NPP Y Q + + P T Q + VQ P + ++ CPSC I +++ Y +
Sbjct: 57 NPPSYYTQ-PAPIPNNNPI--TVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGA 113
Query: 330 KTHXXXXXXXXXXXXXXX-XIPYCGKSCRNATHYCPNCSA 446
T IP+C + ++ HYCPNC A
Sbjct: 114 LTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
>BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +3
Query: 153 NPPPYNNQIQTDLYHVGPXVPTQQFITVQAP-QMGPKSVRYTCPSCRASIKTRVEYVSAT 329
NPP Y Q + + P T Q + VQ P + ++ CPSC I +++ Y +
Sbjct: 57 NPPSYYTQ-PAPIPNNNPI--TVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGA 113
Query: 330 KTHXXXXXXXXXXXXXXX-XIPYCGKSCRNATHYCPNCSA 446
T IP+C + ++ HYCPNC A
Sbjct: 114 LTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
>BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein.
Length = 161
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +3
Query: 153 NPPPYNNQIQTDLYHVGPXVPTQQFITVQAP-QMGPKSVRYTCPSCRASIKTRVEYVSAT 329
NPP Y Q + + P T Q + VQ P + ++ CPSC I +++ Y +
Sbjct: 57 NPPSYYTQ-PAPIPNNNPI--TVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGA 113
Query: 330 KTHXXXXXXXXXXXXXXX-XIPYCGKSCRNATHYCPNCSA 446
T IP+C + ++ HYCPNC A
Sbjct: 114 LTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
>AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane
protein of lysosome/late endosome protein.
Length = 161
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +3
Query: 153 NPPPYNNQIQTDLYHVGPXVPTQQFITVQAP-QMGPKSVRYTCPSCRASIKTRVEYVSAT 329
NPP Y Q + + P T Q + VQ P + ++ CPSC I +++ Y +
Sbjct: 57 NPPSYYTQ-PAPIPNNNPI--TVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGA 113
Query: 330 KTHXXXXXXXXXXXXXXX-XIPYCGKSCRNATHYCPNCSA 446
T IP+C + ++ HYCPNC A
Sbjct: 114 LTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,820,257
Number of Sequences: 237096
Number of extensions: 1734143
Number of successful extensions: 2936
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2923
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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