Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17o24f
         (734 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47069-3|CAE17781.1|  141|Caenorhabditis elegans Hypothetical pr...    48   7e-06
U67956-1|AAB07690.2|  157|Caenorhabditis elegans Hypothetical pr...    46   3e-05
AL110500-20|CAI79282.1|  110|Caenorhabditis elegans Hypothetical...    34   0.12 
AL032626-6|CAA21526.1|  132|Caenorhabditis elegans Hypothetical ...    32   0.48 
Z69661-2|CAA93494.1|  925|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AL032626-7|CAA21544.1|   79|Caenorhabditis elegans Hypothetical ...    30   1.5  
Z69664-4|CAA93517.1|  483|Caenorhabditis elegans Hypothetical pr...    29   4.5  

>Z47069-3|CAE17781.1|  141|Caenorhabditis elegans Hypothetical
           protein F36G3.3 protein.
          Length = 141

 Score = 48.0 bits (109), Expect = 7e-06
 Identities = 29/99 (29%), Positives = 43/99 (43%)
 Frame = +3

Query: 150 QNPPPYNNQIQTDLYHVGPXVPTQQFITVQAPQMGPKSVRYTCPSCRASIKTRVEYVSAT 329
           +N    N+ + T L   GP +PT   I     ++ P + +  CP CR  I TR + V   
Sbjct: 41  ENVVDVNSPVYTTLAS-GP-MPTSTIII----RLEPHATKLQCPYCRMDIVTRTKSVYGL 94

Query: 330 KTHXXXXXXXXXXXXXXXXIPYCGKSCRNATHYCPNCSA 446
            T                 +P+C +SC++  H CPNC A
Sbjct: 95  LTWIFFAALFLFGCWCCCFLPFCLRSCKDIIHTCPNCRA 133


>U67956-1|AAB07690.2|  157|Caenorhabditis elegans Hypothetical
           protein F16F9.1 protein.
          Length = 157

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 26/91 (28%), Positives = 38/91 (41%)
 Frame = +3

Query: 174 QIQTDLYHVGPXVPTQQFITVQAPQMGPKSVRYTCPSCRASIKTRVEYVSATKTHXXXXX 353
           Q+Q  +   G   PT   +T   P     S   TC SC   + T  ++V  + T      
Sbjct: 59  QLQNVVLPGGQPNPTVVIVTTPKPAPSFASYETTCYSCGKYVHTLPKFVIGSLT-WIVFI 117

Query: 354 XXXXXXXXXXXIPYCGKSCRNATHYCPNCSA 446
                      +P+C  SC++A HYCP C+A
Sbjct: 118 LVLICFFPLAFVPFCLDSCKDAHHYCPRCNA 148


>AL110500-20|CAI79282.1|  110|Caenorhabditis elegans Hypothetical
           protein Y87G2A.19 protein.
          Length = 110

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +3

Query: 276 CPSCRASIKTRVEYVSATKTHXXXXXXXXXXXXXXXX----IPYCGKSCRNATHYCPNCS 443
           CP C+   +T + +V+   T+                    +P+C ++ ++A HYCP+C 
Sbjct: 38  CPRCKVHGETELRFVNGFFTYVSFFIILIFGFAILPLFFLWVPFCVETFKDAEHYCPSCR 97

Query: 444 A 446
           A
Sbjct: 98  A 98


>AL032626-6|CAA21526.1|  132|Caenorhabditis elegans Hypothetical
           protein Y37D8A.6 protein.
          Length = 132

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 27/105 (25%), Positives = 37/105 (35%), Gaps = 8/105 (7%)
 Frame = +3

Query: 150 QNPPPYNNQIQTDLYHVGPX------VPTQQFITVQAPQMGPKSVRYT--CPSCRASIKT 305
           Q PPP      T +   GP       V   Q I +   +M P    YT  CP C  ++ T
Sbjct: 21  QQPPPTIIYPPTQMPQQGPGQGPVYVVQQPQEIIIVGTKMAPSFEPYTEFCPRCNTNVCT 80

Query: 306 RVEYVSATKTHXXXXXXXXXXXXXXXXIPYCGKSCRNATHYCPNC 440
           RVE      +                   +C    +++ H CPNC
Sbjct: 81  RVERTMGFCSWTMLFLGLFVFFPLLCC--FCLDGFKDSRHSCPNC 123


>Z69661-2|CAA93494.1|  925|Caenorhabditis elegans Hypothetical
           protein F48F7.4 protein.
          Length = 925

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +3

Query: 129 VNXAETTQNPPPYNNQIQTDLYHVGPXVPTQQFITVQAPQMGPK 260
           V+ A+T   P P  +Q     YH GP +  Q +  V   Q GP+
Sbjct: 206 VSHADTGLQPLPPQHQTHPPNYHQGPIIYQQSYAPVAHYQQGPQ 249


>AL032626-7|CAA21544.1|   79|Caenorhabditis elegans Hypothetical
           protein Y37D8A.8 protein.
          Length = 79

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/55 (29%), Positives = 21/55 (38%)
 Frame = +3

Query: 276 CPSCRASIKTRVEYVSATKTHXXXXXXXXXXXXXXXXIPYCGKSCRNATHYCPNC 440
           CP CR ++ T VEY                       +  C    R+A H+CPNC
Sbjct: 17  CPRCRCTVVTVVEYEMGCFAWLIIILIIFVAFFLIYIL--CCIDIRDAIHHCPNC 69


>Z69664-4|CAA93517.1|  483|Caenorhabditis elegans Hypothetical
           protein K04D7.3 protein.
          Length = 483

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -1

Query: 470 LTDVAPDIRAAVRTVVCGVSAAFAAIRNA 384
           LT +AP    AV+T++CG SA   AI+ A
Sbjct: 131 LTSIAPKGLKAVQTMLCGTSANENAIKTA 159


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,458,756
Number of Sequences: 27780
Number of extensions: 290993
Number of successful extensions: 628
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)