Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17o16f
(794 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 99 2e-21
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 83 2e-16
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 61 1e-09
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 32 0.54
U40959-4|AAA81768.1| 112|Caenorhabditis elegans Hypothetical pr... 31 0.95
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 31 1.3
U80454-1|AAB37872.1| 137|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC006805-1|AAK68515.1| 129|Caenorhabditis elegans Hypothetical ... 29 2.9
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 29 5.1
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl... 29 5.1
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 28 6.7
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 28 8.9
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 28 8.9
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 99 bits (238), Expect = 2e-21
Identities = 74/222 (33%), Positives = 109/222 (49%), Gaps = 7/222 (3%)
Frame = +3
Query: 81 TNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGR 260
T R+IGGS ++ + +P LL ++ CGG++++ +L+AAHC D
Sbjct: 53 TLDHRLIGGSESSPHSWPWTVQLLSRLGHHR----CGGSLIDPNFVLTAAHCFAKDRRPT 108
Query: 261 -WRIRVGSTFANSGGVVHNVNRIIIHPNYNRRTADS-DLCILRSNSNIAYNNNVRPINIA 434
+ +RVG + SG H V + IHP YN S D I+R + + + RPI +
Sbjct: 109 SYSVRVGGHRSGSGSP-HRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICLP 167
Query: 435 GANYNLGDNQVVWAAGWGATSLGGS-NSEQLRHVQVWTINQNACVQRYRPINRAITANML 611
+ +N++ GWG+T G S ++ LR + V ++ C I R +ML
Sbjct: 168 --SLPAVENRLCVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSML 225
Query: 612 CSGVLDVGGRDQCQGDSGGPLLHNR----VLVGVCSWGQYCA 725
C+G G D CQGDSGGPL+ R L GV SWG CA
Sbjct: 226 CAGY-SYGKIDSCQGDSGGPLMCARDGHWELTGVVSWGIGCA 266
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 83.0 bits (196), Expect = 2e-16
Identities = 68/221 (30%), Positives = 104/221 (47%), Gaps = 10/221 (4%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDA-TGRWRI 269
R++GG T +P AAL N CG +IL++ +++AAHC D + +
Sbjct: 26 RVVGGFETVPGAFPWTAALR---NKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEV 82
Query: 270 RVGSTFANS---GGVVHNVNRIIIHPNYNRRTADSDLCILR-SNSNIAYNNNVRPINIAG 437
VG N + + RI +P Y + D+ IL I +N +PI +
Sbjct: 83 VVGDWDNNQTDGNEQIFYLQRIHFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQPICLPS 141
Query: 438 ANYNLGDNQVVWAAGWGATSLGGSNSEQLRHVQVWTINQNACVQRYRPINRAITANMLCS 617
++ + +GWG S+G +E+L+ + IN+ CV + I +++ + C+
Sbjct: 142 KDFVYTPGRQCVVSGWG--SMGLRYAERLQAALIPIINRFDCVNSSQ-IYSSMSRSAFCA 198
Query: 618 GVLDVGGRDQCQGDSGGPLLHNR-----VLVGVCSWGQYCA 725
G L+ GG D CQGDSGGP R VL GV SWG CA
Sbjct: 199 GYLE-GGIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCA 238
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 60.9 bits (141), Expect = 1e-09
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 16/223 (7%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 272
RIIGG++ I+ A L ++ N CG +++ +++AAHC T R +
Sbjct: 37 RIIGGNS--IDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQT-RSFVY 93
Query: 273 VGSTFANSGGVVHNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNL 452
V N+ +V IH YN +TAD+D+ +LR +S+++ ++P+ + + L
Sbjct: 94 VREP-KNNRERSFSVKEAYIHSGYNNQTADNDIALLRISSDLS-KLGIKPVCLVHDDSKL 151
Query: 453 ---GDNQVVWAAG--WGATSLGGS---NSEQLRHVQVWTINQNACVQRYR---PINRAIT 599
N VV G G S G NS+ L+ V I+ + CV+ +R ++ IT
Sbjct: 152 LKQYKNGVVIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSVKIT 211
Query: 600 ANMLCSGVLDVGGRDQCQGDSGGPLLHNR-----VLVGVCSWG 713
+C+G G GDSGGPLL ++ V +G+ S+G
Sbjct: 212 GYQICAGAYLHG---TAPGDSGGPLLIHKSNGEYVQIGITSYG 251
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 31.9 bits (69), Expect = 0.54
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = -3
Query: 786 GLDPRGETGN--ANVNHQGSDGQRSTVPKSRHQRGRGCGGEDHRS-HPGTGRDHRRPKH 619
G++ RG +G+ H G G RS P RH G G GG RS PG H H
Sbjct: 222 GVEHRGRSGSPGGRRGHGGRHGSRSGSPGGRHGHG-GHGGHGSRSGSPGGRHGHGGSGH 279
>U40959-4|AAA81768.1| 112|Caenorhabditis elegans Hypothetical
protein B0310.4 protein.
Length = 112
Score = 31.1 bits (67), Expect = 0.95
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = -3
Query: 786 GLDPRGETGNANVNHQGSDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 607
G RGET H+G + R + + RG GE HR G HR H+ T
Sbjct: 8 GESHRGETHRGET-HRG-ETHRGETHRGKTHRGETHRGETHRGETHRGETHRGETHRGKT 65
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/56 (33%), Positives = 23/56 (41%)
Frame = -3
Query: 774 RGETGNANVNHQGSDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 607
RGET H+G + T H RG GE HR G+ HR H+ T
Sbjct: 22 RGETHRGET-HRGKTHRGETHRGETH-RGETHRGETHRGETHRGKTHRGETHRGET 75
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = -3
Query: 774 RGETGNANVNHQGSDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 607
RGET H+G + R + RG GE HR G HR H+ T
Sbjct: 27 RGETHRGKT-HRG-ETHRGETHRGETHRGETHRGETHRGKTHRGETHRGETHRGET 80
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = -3
Query: 774 RGETGNANVNHQGSDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 607
RGE+ H+G + R + RG+ GE HR G HR H+ T
Sbjct: 7 RGESHRGET-HRG-ETHRGETHRGETHRGKTHRGETHRGETHRGETHRGETHRGET 60
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/60 (30%), Positives = 23/60 (38%)
Frame = -3
Query: 786 GLDPRGETGNANVNHQGSDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 607
G RGET H+G + R + RG+ GE HR G R H+ T
Sbjct: 33 GKTHRGETHRGET-HRG-ETHRGETHRGETHRGKTHRGETHRGETHRGETRRGETHRGKT 90
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -1
Query: 365 TVSSTSVIVGMNDNSVHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGTKDRSLVKDVSTT 186
T ++T +I G +V T TV GT T PT + T ++GT ++ + +TT
Sbjct: 205 TTTTTVLINGTTTTTVPTNETTTTVPLNGTTTTVPTNETTTTSPLNGTTTTTVPINGATT 264
>U80454-1|AAB37872.1| 137|Caenorhabditis elegans Hypothetical
protein T16A1.4 protein.
Length = 137
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 786 GLDPRGETGNANVNHQGSDG 727
G+DP+ TG+ V H GSDG
Sbjct: 89 GVDPKDSTGSIEVEHAGSDG 108
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/118 (22%), Positives = 41/118 (34%), Gaps = 3/118 (2%)
Frame = -1
Query: 437 TSNINRTNVVVISYVGITA*DAEVTVSSTSVIVGMNDNSVHVMHNTPTVGKGGTNTNTPT 258
T++ T + IT EVT ++ V + T T T T TPT
Sbjct: 29 TADPTTTTTEATTTTEITTTTEEVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTTTTTPT 88
Query: 257 ACSVTVWTVSGTKDRSLVKDVSTTRXXXXXXXPCIQQSSYTGI---LVNVGRGATNNP 93
+ T T + T + +TT P ++ V++G G NNP
Sbjct: 89 TTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMPPCNPNAVSLGMGDANNP 146
>AC006805-1|AAK68515.1| 129|Caenorhabditis elegans Hypothetical
protein Y54B9A.1 protein.
Length = 129
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = -3
Query: 774 RGETGNANVNHQGSDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 607
RGET H+G + R + RG GE HR G HR H+ T
Sbjct: 41 RGETRRGET-HRG-ETHRGETHRGETHRGETHRGETHRGETYRGETHRGETHRGET 94
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/61 (26%), Positives = 23/61 (37%)
Frame = -3
Query: 789 IGLDPRGETGNANVNHQGSDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQST 610
I L+P G+ + + R + +RG GE HR G HR H+
Sbjct: 14 IVLEPYGKFKKMLLRDLRGETHRGETRRGETRRGETHRGETHRGETHRGETHRGETHRGE 73
Query: 609 T 607
T
Sbjct: 74 T 74
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = -3
Query: 780 DPRGETGNANVNHQGSDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 607
D RGET H+G + +R + RG GE HR G HR H+ T
Sbjct: 29 DLRGET------HRG-ETRRGETRRGETHRGETHRGETHRGETHRGETHRGETHRGET 79
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 28.7 bits (61), Expect = 5.1
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 2/104 (1%)
Frame = -1
Query: 500 ERCSTPTSSPNNLVITKIVIGTSNINRTNVV--VISYVGITA*DAEVTVSSTSVIVGMND 327
E T++P T I TS+ T+ V++ +T+ T +ST
Sbjct: 256 ETTKPTTTTPTTTTTTTIPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTSTSTPT------ 309
Query: 326 NSVHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGTKDRSLVKDV 195
+ + TP+ T T+T T S + T+S TK + D+
Sbjct: 310 TTTTMQTTTPSTTSTPTTTSTTTTTSASTTTISTTKPPTTQIDI 353
>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
protein 2 protein.
Length = 1080
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 345 NRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNL 452
N AD D L ++ YNNN+R N+A N NL
Sbjct: 913 NESEADYDDIYLEKQNSGKYNNNIRHGNMAFRNANL 948
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -3
Query: 741 QGSDGQRSTVPKSR-HQRGRGCGGEDHRSHPGTGRDHRRPK 622
+G+D +RST H+ R HR H G R+HR K
Sbjct: 270 RGADRKRSTEQHHHSHRSSRDHRDHRHRDHRGEHREHREHK 310
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 120 INQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 236
IN Y + + TW+ + C G + + R IL+A HC
Sbjct: 58 INTYTNVKNIDETWS-----KHCSGTLTSPRHILTATHC 91
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 183 SCGGNILNQRSILSAAHCPYG-DATGRWRIRVGSTFANS 296
+C G I++ R IL A HC G + G W + + TF S
Sbjct: 192 TCTGTIVSPRHILIATHCFAGQNRDGSWNL-IEDTFDRS 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,062,722
Number of Sequences: 27780
Number of extensions: 449625
Number of successful extensions: 1405
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1386
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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