Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17o12f
(704 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0568 - 4192514-4192606,4192694-4192753,4192837-4192932,419... 235 3e-62
07_03_1256 - 25237465-25237590,25237833-25237918,25238025-252380... 136 1e-32
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852... 135 3e-32
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 135 3e-32
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 134 5e-32
06_01_0539 + 3869156-3869908 127 7e-30
06_01_0529 + 3831100-3831852 127 7e-30
02_05_0057 + 25472872-25472912,25473012-25473157,25474008-254740... 120 9e-28
03_03_0187 + 15253000-15253207,15253281-15253370,15254338-152544... 112 2e-25
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 106 2e-23
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 95 4e-20
06_01_0479 + 3419657-3420337 94 1e-19
02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856 61 7e-10
01_03_0148 - 13153782-13154870,13155823-13156672,13156698-13157008 31 1.2
09_04_0656 + 19267392-19267432,19267530-19267637,19269114-192691... 29 2.7
04_04_1376 + 33058306-33059763,33059851-33059991,33060594-330606... 29 3.6
04_01_0097 - 998766-999383,999479-999861,1000021-1000398,1000486... 29 3.6
09_03_0181 + 13149531-13149601,13150772-13151126,13152527-131526... 28 6.3
08_01_0186 - 1561695-1561958,1562041-1562183,1562260-1562326,156... 28 6.3
06_01_0310 - 2240745-2242130 28 8.3
>03_01_0568 -
4192514-4192606,4192694-4192753,4192837-4192932,
4193088-4193170,4193289-4193347,4193463-4193559,
4194151-4194232,4194353-4194447,4194585-4194660
Length = 246
Score = 235 bits (574), Expect = 3e-62
Identities = 110/213 (51%), Positives = 153/213 (71%)
Frame = +1
Query: 64 MARESSAGFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRL 243
M+R + AG+DRHITIFSPEGRLYQVEYA KA+ G+TS+ +RG D+ V Q+KVPD+L
Sbjct: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKL 60
Query: 244 LDPVSVTHLFALTDRIGCVMTGMIADSRSQVQRARYEAANWQYKYGSEIPVHILCRRIAD 423
LD SVTHLF +T IG + TG+ AD+RS V +AR EAA +++K+G E+PV +L + IAD
Sbjct: 61 LDHTSVTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIAD 120
Query: 424 ISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVAAGAKTVDGNAYLE 603
+QVYTQ+A MRPLG M++ YD+E ++K DP+G++ +KA +AG K + +LE
Sbjct: 121 KAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
Query: 604 KKLKKRSDLSTDDAIQLAISCLSQVLSVDFKSS 702
KK+K S ++ +Q+AIS L VL DFK++
Sbjct: 181 KKMKDDPQFSYEETVQIAISALQSVLQEDFKAT 213
>07_03_1256 -
25237465-25237590,25237833-25237918,25238025-25238083,
25238516-25238612,25239582-25239663,25239752-25240096
Length = 264
Score = 136 bits (330), Expect = 1e-32
Identities = 69/180 (38%), Positives = 114/180 (63%), Gaps = 1/180 (0%)
Frame = +1
Query: 139 EYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIA 318
+YA A+ G+TSV +RG D+ V RK D+L DP ++T+LFA+TDRIG + TGM
Sbjct: 85 DYAFNAVKLAGITSVGVRGDDSVYVLTHRK-EDKLHDPTTITNLFAITDRIGLLATGMPG 143
Query: 319 DSRSQVQRARYEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDD 498
D R+ Q AR AA +++K+G ++ +L + IAD +Q+ TQ+A++RP G M+ D+
Sbjct: 144 DGRAIAQEARNAAAEFRFKWGYKMSPCMLAQWIADRAQIRTQHAQIRPYGVVSMIFGIDE 203
Query: 499 EAG-PCVYKTDPSGYYCSYKAVAAGAKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQ 675
E G P ++ DP+G + ++KA +AG K + +LE+++K + LS+ + ++ LS+
Sbjct: 204 EKGTPELFTCDPAGQFFAHKATSAGPKEKEVMNFLEERMKSKPSLSSGTTKGVCVTILSK 263
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 82 AGFDRHITIFSPEGRLYQV 138
A ++R IT+FSPEGRL Q+
Sbjct: 21 ADYERFITLFSPEGRLCQL 39
>11_06_0394 -
23084485-23084577,23084677-23084802,23085134-23085236,
23085895-23085953,23086418-23086519,23086601-23086714,
23087666-23087746,23088073-23088154,23088504-23088556
Length = 270
Score = 135 bits (327), Expect = 3e-32
Identities = 70/173 (40%), Positives = 108/173 (62%), Gaps = 5/173 (2%)
Frame = +1
Query: 88 FDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTH 267
+DR + FSPEGRL+QVEYA++AI G T++ L+ D V+A +++V LL+P SV
Sbjct: 21 YDRGVNTFSPEGRLFQVEYAIEAIKLGS-TAIGLKTKDGVVLAVEKRVTSPLLEPSSVEK 79
Query: 268 LFALTDRIGCVMTGMIADSRSQVQRARYEAANWQYKYGSEIPVHILCRRIADISQVYTQN 447
+ + + IGC M+G+IAD+R+ V+ AR E N ++ YG + V + I D++ + +
Sbjct: 80 IMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEG 139
Query: 448 AE---MRPLGCSMMLIAYDDEAGPCVYKTDPSG--YYCSYKAVAAGAKTVDGN 591
E RP G S+ LIA DE GP +Y TDPSG + C+ KA+ +G++ D +
Sbjct: 140 DEESMSRPFGVSL-LIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSS 191
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 135 bits (327), Expect = 3e-32
Identities = 74/201 (36%), Positives = 115/201 (57%), Gaps = 1/201 (0%)
Frame = +1
Query: 82 AGFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPVSV 261
A +DR IT+FSP+G L+QVEYAL+A+ +G +V +RGTD V+ ++K +L D S+
Sbjct: 72 ARYDRAITVFSPDGHLFQVEYALEAVRKGN-AAVGVRGTDTVVLGVEKKSTPKLQDSRSM 130
Query: 262 THLFALTDRIGCVMTGMIADSRSQVQRARYEAANWQYKYGSEIPVHILCRRIADISQVYT 441
+ +L I G+ AD+R + RAR E + + + V + R IA + Q YT
Sbjct: 131 RKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYT 190
Query: 442 QNAEMRPLGCSMMLIAYDD-EAGPCVYKTDPSGYYCSYKAVAAGAKTVDGNAYLEKKLKK 618
Q+ +RP G S +++ +D P +Y+TDPSG + ++KA A G + +LEK K
Sbjct: 191 QSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK- 249
Query: 619 RSDLSTDDAIQLAISCLSQVL 681
D S + I+LAI L +V+
Sbjct: 250 --DTSGKETIKLAIRALLEVV 268
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 134 bits (325), Expect = 5e-32
Identities = 74/201 (36%), Positives = 115/201 (57%), Gaps = 1/201 (0%)
Frame = +1
Query: 82 AGFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPVSV 261
A +DR IT+FSP+G L+QVEYAL+A+ +G +V +RG+D V+ ++K +L D SV
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGN-AAVGVRGSDTVVLGVEKKSTPKLQDSRSV 60
Query: 262 THLFALTDRIGCVMTGMIADSRSQVQRARYEAANWQYKYGSEIPVHILCRRIADISQVYT 441
+ +L I G+ AD+R + RAR E + + + V + R IA + Q YT
Sbjct: 61 RKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYT 120
Query: 442 QNAEMRPLGCSMMLIAYDDEAG-PCVYKTDPSGYYCSYKAVAAGAKTVDGNAYLEKKLKK 618
Q+ +RP G S +++ +D P +Y+TDPSG + ++KA A G + +LEK K+
Sbjct: 121 QSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE 180
Query: 619 RSDLSTDDAIQLAISCLSQVL 681
S T I+LAI L +V+
Sbjct: 181 TSGKET---IKLAIRALLEVV 198
>06_01_0539 + 3869156-3869908
Length = 250
Score = 127 bits (307), Expect = 7e-30
Identities = 68/202 (33%), Positives = 108/202 (53%), Gaps = 1/202 (0%)
Frame = +1
Query: 79 SAGFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPV- 255
S +D TIFSPEGRLYQVEYA++AI G +++ + D V+ ++KV +LL
Sbjct: 2 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAG-SALGVLAADGVVLVGEKKVTSKLLQTSR 60
Query: 256 SVTHLFALTDRIGCVMTGMIADSRSQVQRARYEAANWQYKYGSEIPVHILCRRIADISQV 435
S ++ + + C + G+++D+ + AR A + Y IPV L + + D Q
Sbjct: 61 SAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQG 120
Query: 436 YTQNAEMRPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVAAGAKTVDGNAYLEKKLK 615
YTQ +RP G S + +D G +Y +DPSG Y +KA A GA + + L K
Sbjct: 121 YTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSML--KQD 178
Query: 616 KRSDLSTDDAIQLAISCLSQVL 681
R ++ ++A+ LA+ LS+ +
Sbjct: 179 YRDGMTREEAVALALKVLSKTM 200
>06_01_0529 + 3831100-3831852
Length = 250
Score = 127 bits (307), Expect = 7e-30
Identities = 68/202 (33%), Positives = 108/202 (53%), Gaps = 1/202 (0%)
Frame = +1
Query: 79 SAGFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPV- 255
S +D TIFSPEGRLYQVEYA++AI G +++ + D V+ ++KV +LL
Sbjct: 2 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAG-SALGVLAADGVVLVGEKKVTSKLLQTSR 60
Query: 256 SVTHLFALTDRIGCVMTGMIADSRSQVQRARYEAANWQYKYGSEIPVHILCRRIADISQV 435
S ++ + + C + G+++D+ + AR A + Y IPV L + + D Q
Sbjct: 61 SAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQG 120
Query: 436 YTQNAEMRPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVAAGAKTVDGNAYLEKKLK 615
YTQ +RP G S + +D G +Y +DPSG Y +KA A GA + + L K
Sbjct: 121 YTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSML--KQD 178
Query: 616 KRSDLSTDDAIQLAISCLSQVL 681
R ++ ++A+ LA+ LS+ +
Sbjct: 179 YRDGMTREEAVALALKVLSKTM 200
>02_05_0057 +
25472872-25472912,25473012-25473157,25474008-25474072,
25474182-25474228,25474922-25474997,25475176-25475243,
25475862-25475931,25476178-25476263,25476418-25476480,
25476556-25476621,25476740-25476788
Length = 258
Score = 120 bits (290), Expect = 9e-28
Identities = 76/215 (35%), Positives = 114/215 (53%), Gaps = 23/215 (10%)
Frame = +1
Query: 100 ITIFSPEGRLYQVEYALKAINQGGLTSVALRGT-----------------------DAAV 210
+T FSP G+L Q+E+AL A+ G TS+ ++G + V
Sbjct: 10 LTTFSPSGKLVQIEHALTAVGSGQ-TSLGIKGASREAIPSLYFYCVMRIEKGRGAANGVV 68
Query: 211 VAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQRARYEAANWQYKYGSEI 390
+A ++K+P L+D SV + +LT IG V +GM D R V+++R +A + Y I
Sbjct: 69 IATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETI 128
Query: 391 PVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVAAG 570
PV L R A + Q +TQ+ +RP G S+++ YDD GP +Y+ DPSG Y S+KA A G
Sbjct: 129 PVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDN-GPQLYQVDPSGSYFSWKASAMG 187
Query: 571 AKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQ 675
+ +LEK+ + D+ DDAI AI L +
Sbjct: 188 KNVSNAKTFLEKRYTE--DMELDDAIHTAILTLKE 220
>03_03_0187 +
15253000-15253207,15253281-15253370,15254338-15254402,
15254489-15254535,15255195-15255270,15255432-15255499,
15255793-15255862,15256024-15256109,15256328-15256390,
15256472-15256537,15256938-15256986
Length = 295
Score = 112 bits (270), Expect = 2e-25
Identities = 76/217 (35%), Positives = 110/217 (50%), Gaps = 29/217 (13%)
Frame = +1
Query: 112 SPEGRLYQVEYALKAINQG----GLTSVALRGTD-------------------------A 204
SP G+L Q+E+AL A+ G G+ V LR D
Sbjct: 44 SPSGKLVQIEHALTAVGSGQTSLGIKVVRLRSWDLGFRSWPRVDCGSVCAGSSQRVAANG 103
Query: 205 AVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQRARYEAANWQYKYGS 384
V+A ++K+P L+D SV + +LT IG V +GM D R V+++R +A + Y
Sbjct: 104 VVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKE 163
Query: 385 EIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVA 564
IPV L R A + Q +TQ+ +RP G S+++ YDD GP +Y+ DPSG Y S+KA A
Sbjct: 164 TIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDN-GPQLYQVDPSGSYFSWKASA 222
Query: 565 AGAKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQ 675
G + +LEK+ + D+ DDAI AI L +
Sbjct: 223 MGKNVSNAKTFLEKRYTE--DMELDDAIHTAILTLKE 257
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 106 bits (254), Expect = 2e-23
Identities = 58/162 (35%), Positives = 90/162 (55%)
Frame = +1
Query: 85 GFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVT 264
G+D +T FSP+GR++QVEYA KA++ G T V ++ D V+ ++ V +++ S
Sbjct: 7 GYDLSVTTFSPDGRVFQVEYAGKAVDNSG-TVVGIKCKDGIVLGVEKLVTSKMILKGSNR 65
Query: 265 HLFALTDRIGCVMTGMIADSRSQVQRARYEAANWQYKYGSEIPVHILCRRIADISQVYTQ 444
L ++ G + G+ AD R V RA+ EAA+++ YG +PV L R+A + T
Sbjct: 66 RLHSVHRHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPMPVKELADRVASYVHLCTL 125
Query: 445 NAEMRPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVAAG 570
+RP GC ++L YD + GP +Y +PSG Y A G
Sbjct: 126 YWWLRPFGCGVILGGYDRD-GPQLYMIEPSGLSYKYFGAALG 166
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 95.5 bits (227), Expect = 4e-20
Identities = 63/196 (32%), Positives = 99/196 (50%), Gaps = 8/196 (4%)
Frame = +1
Query: 85 GFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVT 264
G+D +T FSP+GR++QVEYA KA++ G T V ++ D V+ ++ V +++ S
Sbjct: 7 GYDLSVTTFSPDGRVFQVEYATKAVDNSG-TVVGIKCKDGIVLGVEKLVTSKMMLEGSNR 65
Query: 265 HLFALTDRIGC--------VMTGMIADSRSQVQRARYEAANWQYKYGSEIPVHILCRRIA 420
+ ++ G + G+ AD R V RA+ EAA+++ YG I V L R+A
Sbjct: 66 RIHSVHWHSGLDIILINVMAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVA 125
Query: 421 DISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVAAGAKTVDGNAYL 600
+ T +RP GC ++L YD + GP +Y +PSG Y A G +
Sbjct: 126 SYVHLCTLYWWLRPFGCGVILGGYDRD-GPQLYMIEPSGVSYKYFGAALGKGRQAAKTEI 184
Query: 601 EKKLKKRSDLSTDDAI 648
EK K S+L+ + I
Sbjct: 185 EK--LKLSELTCREGI 198
>06_01_0479 + 3419657-3420337
Length = 226
Score = 93.9 bits (223), Expect = 1e-19
Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 1/179 (0%)
Frame = +1
Query: 148 LKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPV-SVTHLFALTDRIGCVMTGMIADS 324
++AI G +++ + D V+ ++KV +LL S ++ + + C + G+++D+
Sbjct: 1 MEAIGNAG-SALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDA 59
Query: 325 RSQVQRARYEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEA 504
+ AR A + Y IPV L + + D Q YTQ +RP G S + +D
Sbjct: 60 NILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHH 119
Query: 505 GPCVYKTDPSGYYCSYKAVAAGAKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQVL 681
G +Y +DPSG Y +KA A GA + + L K R L+ ++A+ LA+ LS+ +
Sbjct: 120 GFQLYMSDPSGNYSGWKAAAVGANSQAAQSML--KQDYRDGLTREEAVALALKVLSKTM 176
>02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856
Length = 272
Score = 61.3 bits (142), Expect = 7e-10
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 26/204 (12%)
Frame = +1
Query: 148 LKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSR 327
++A+ QG V LR AV+AA K L +F + D G + G+ AD R
Sbjct: 1 MEAVKQGS-ACVGLRSRTHAVLAAANKAASELSS--HQRKVFRVADHAGVALAGLTADGR 57
Query: 328 SQVQRARYEAANWQYKYGSEIPVHILCRRIADISQ--VYTQNAEMRP------LGCSMM- 480
+ R E N + Y + +PV L R+AD +Q +Y + P + S+M
Sbjct: 58 VLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQPDMYIFGITICPTTFLWIMSVSLMV 117
Query: 481 -----------------LIAYDDEAGPCVYKTDPSGYYCSYKAVAAGAKTVDGNAYLEKK 609
L+A DE+G +Y PSG Y Y+A A G+++ +LE++
Sbjct: 118 LQVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERR 177
Query: 610 LKKRSDLSTDDAIQLAISCLSQVL 681
+ +D + + I+ A+S + + L
Sbjct: 178 FEGYNDYTPEQLIKDALSAIKETL 201
>01_03_0148 - 13153782-13154870,13155823-13156672,13156698-13157008
Length = 749
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/71 (25%), Positives = 29/71 (40%)
Frame = +1
Query: 406 CRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVAAGAKTVD 585
C DI + + + CS+ + P + YYC+Y A AA +D
Sbjct: 554 CVSTTDIILAWHVATRLYEMRCSLHASPTPSPSSPDMAAACHLSYYCAYLASAAPELLLD 613
Query: 586 GNAYLEKKLKK 618
A+ EK+ K+
Sbjct: 614 SAAWTEKRYKE 624
>09_04_0656 +
19267392-19267432,19267530-19267637,19269114-19269195,
19269637-19269766,19269882-19270024,19270198-19270284,
19270384-19270458
Length = 221
Score = 29.5 bits (63), Expect = 2.7
Identities = 43/181 (23%), Positives = 71/181 (39%), Gaps = 4/181 (2%)
Frame = +1
Query: 160 NQGGLTSVALRGTDAAVVAAQRK--VPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQ 333
N GG T VA+ G D VVAA + V +L + + L D+ +G D ++
Sbjct: 11 NNGG-TCVAIAGADYCVVAADTRLSVGYNILTR-DHSKICELADKCALASSGFQGDIKAL 68
Query: 334 VQRARYEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGPC 513
+ +Q+++ + C +A + P +L D E C
Sbjct: 69 HKNLAARELLYQHQHNKRMS----CPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGC 124
Query: 514 VYKTDPSGYY--CSYKAVAAGAKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQVLSV 687
V+ D G Y Y A G+ + L+ +LK S L + A++ LS+ +V
Sbjct: 125 VFTYDAVGSYERTGYSAQGTGSALI--MPVLDNQLKSPSPLLL--PARDAVTPLSETEAV 180
Query: 688 D 690
D
Sbjct: 181 D 181
>04_04_1376 +
33058306-33059763,33059851-33059991,33060594-33060644,
33061094-33061171,33061245-33061388,33061871-33062002
Length = 667
Score = 29.1 bits (62), Expect = 3.6
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Frame = +1
Query: 112 SPEGR-LYQVEYALKAINQGG---LTSVALRGTDAAVVAAQRKVPDRL-LDPVSVTHLFA 276
S EGR L ++ AL+ I++G S+ G D R RL +D +S L A
Sbjct: 525 SREGRRLIEIRNALEMIHRGENVRFESIFYGGVDIH----DRHRDMRLDIDNMSYEELLA 580
Query: 277 LTDRIGCVMTGMIADSRSQVQRARYEAANWQYKYGSEIPVHILCR 411
L +RIG V TG+ + +++ + R + ++W+ + E +C+
Sbjct: 581 LEERIGNVSTGLSEEEVTKLLKQR-KFSSWRLEASVEEEPCCICQ 624
>04_01_0097 -
998766-999383,999479-999861,1000021-1000398,
1000486-1000711,1000799-1001323,1003032-1003164,
1004353-1004435,1004645-1005349,1005483-1005556,
1006290-1006392,1006485-1006727
Length = 1156
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +1
Query: 187 LRGTDAAV--VAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQRARYEAA 360
LR T A V + A+R D L V + H F + R+G + + + ++ R RYEAA
Sbjct: 40 LRKTQAQVEELVAER---DHLAAFVKIQHDF-MVSRVGRLQSSLQQARKADAIRKRYEAA 95
Query: 361 NWQYKYGSEIPVHILCRRIADISQ 432
N + G + ++IA++++
Sbjct: 96 NMEILIGDKEREARSYQKIAELTE 119
>09_03_0181 +
13149531-13149601,13150772-13151126,13152527-13152634,
13152698-13152775,13154828-13154915,13156777-13157177
Length = 366
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -2
Query: 433 LERYQLCVCIRYAQVSQTHTCTASWQPR 350
++++ L C+ YA + TC+ SW+ R
Sbjct: 231 IDQHNLAECLDYANMQVAGTCSCSWKHR 258
>08_01_0186 -
1561695-1561958,1562041-1562183,1562260-1562326,
1562417-1562529,1562603-1562671,1563831-1563870,
1563965-1564035,1565872-1566027,1566104-1566152,
1566228-1567631
Length = 791
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/81 (25%), Positives = 32/81 (39%)
Frame = +1
Query: 163 QGGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQR 342
QG L + + D + AQ P +++D V F + D V A R
Sbjct: 335 QGSL-EIPVVEADKVIDDAQVVQPSKVIDDAQVVQAFKVIDDAQVVQ----ASKEIMTDR 389
Query: 343 ARYEAANWQYKYGSEIPVHIL 405
+YE + YG IP H++
Sbjct: 390 QKYELSVRLQSYGGLIPNHVV 410
>06_01_0310 - 2240745-2242130
Length = 461
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -3
Query: 600 EISVSINCLSTSSYSFIGAVVAGGVCFVHTGPGFIVVRYQHHTATQR 460
E ++ ++++ ++ + +V G C V GP F+V Y H + R
Sbjct: 146 EFKSEVSAIASAQHAHLVRLV--GFCLVPRGPRFLVYEYMEHGSLDR 190
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,318,963
Number of Sequences: 37544
Number of extensions: 332897
Number of successful extensions: 880
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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