Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17o11f
         (804 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003501-1|AAO39505.1|  337|Drosophila melanogaster RE40567p pro...   164   1e-40
AE014297-729|AAF54215.1|  337|Drosophila melanogaster CG9620-PA ...   164   1e-40
BT024295-1|ABC86357.1|  444|Drosophila melanogaster IP12456p pro...    32   1.1  
AE014297-1216|AAF54568.1|  444|Drosophila melanogaster CG6574-PA...    32   1.1  
AY119104-1|AAM50964.1| 1151|Drosophila melanogaster RE07981p pro...    31   2.4  
AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi...    31   2.4  
AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA...    31   2.4  
AY121644-1|AAM51971.1|  978|Drosophila melanogaster LD11689p pro...    30   4.3  
AJ289018-1|CAC17749.1|  978|Drosophila melanogaster calsyntenin-...    30   4.3  
AE014135-195|AAN06580.1|  978|Drosophila melanogaster CG11059-PB...    30   4.3  
AE014135-194|AAF59384.2|  978|Drosophila melanogaster CG11059-PA...    30   4.3  
BT023583-1|AAY84983.1|  286|Drosophila melanogaster IP09422p pro...    29   9.8  
BT023571-1|AAY84971.1|  252|Drosophila melanogaster IP09522p pro...    29   9.8  
AE014296-2057|AAF49991.1|  270|Drosophila melanogaster CG11588-P...    29   9.8  

>BT003501-1|AAO39505.1|  337|Drosophila melanogaster RE40567p
           protein.
          Length = 337

 Score =  164 bits (398), Expect = 1e-40
 Identities = 74/155 (47%), Positives = 104/155 (67%), Gaps = 1/155 (0%)
 Frame = +2

Query: 341 QQSELCSLYTKIFXXXXXXXXXXXXXXFVNKTLFSSQTVALEAPLFITWFQCIISFSICF 520
           + + L + Y KIF              FVNK L SS TV L APLF++WFQC++S  ICF
Sbjct: 7   EHNRLVNKYLKIFFVVSLYWCTSILTVFVNKHLLSSDTVNLGAPLFMSWFQCVVSTVICF 66

Query: 521 TLSQ-NGGVPGIFSFPKGTPWSMDVMKKVIPLAIMYTLMIATNNLCLKHVGVPFYYVGRS 697
             S+ +   P +F+FP+G P  +D  +K++PL+++YTLMI  NNL L +V V FYY+GRS
Sbjct: 67  VASRLSRKYPSVFTFPEGNPLDIDTFRKILPLSVLYTLMIGANNLSLSYVTVAFYYIGRS 126

Query: 698 LTTVFNVVFSWILLRQATSSRCILCCAFIIFGXYL 802
           LTTVF+VV ++++LRQ TS +C+LCC  I+ G +L
Sbjct: 127 LTTVFSVVLTYVILRQRTSFKCLLCCGAIVVGFWL 161


>AE014297-729|AAF54215.1|  337|Drosophila melanogaster CG9620-PA
           protein.
          Length = 337

 Score =  164 bits (398), Expect = 1e-40
 Identities = 74/155 (47%), Positives = 104/155 (67%), Gaps = 1/155 (0%)
 Frame = +2

Query: 341 QQSELCSLYTKIFXXXXXXXXXXXXXXFVNKTLFSSQTVALEAPLFITWFQCIISFSICF 520
           + + L + Y KIF              FVNK L SS TV L APLF++WFQC++S  ICF
Sbjct: 7   EHNRLVNKYLKIFFVVSLYWCTSILTVFVNKHLLSSDTVNLGAPLFMSWFQCVVSTVICF 66

Query: 521 TLSQ-NGGVPGIFSFPKGTPWSMDVMKKVIPLAIMYTLMIATNNLCLKHVGVPFYYVGRS 697
             S+ +   P +F+FP+G P  +D  +K++PL+++YTLMI  NNL L +V V FYY+GRS
Sbjct: 67  VASRLSRKYPSVFTFPEGNPLDIDTFRKILPLSVLYTLMIGANNLSLSYVTVAFYYIGRS 126

Query: 698 LTTVFNVVFSWILLRQATSSRCILCCAFIIFGXYL 802
           LTTVF+VV ++++LRQ TS +C+LCC  I+ G +L
Sbjct: 127 LTTVFSVVLTYVILRQRTSFKCLLCCGAIVVGFWL 161


>BT024295-1|ABC86357.1|  444|Drosophila melanogaster IP12456p
           protein.
          Length = 444

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 12/41 (29%), Positives = 25/41 (60%)
 Frame = +2

Query: 53  IILYDQ*IFFKAIFVSQIYPFYFDTLLSIKLKYYFYIWVKI 175
           +I++   I+  ++   QI  F+F T ++ ++ YY YI+ K+
Sbjct: 83  VIIWSMLIWTTSLLSLQILEFFFGTYMAAEVAYYTYIYAKV 123


>AE014297-1216|AAF54568.1|  444|Drosophila melanogaster CG6574-PA
           protein.
          Length = 444

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 12/41 (29%), Positives = 25/41 (60%)
 Frame = +2

Query: 53  IILYDQ*IFFKAIFVSQIYPFYFDTLLSIKLKYYFYIWVKI 175
           +I++   I+  ++   QI  F+F T ++ ++ YY YI+ K+
Sbjct: 83  VIIWSMLIWTTSLLSLQILEFFFGTYMAAEVAYYTYIYAKV 123


>AY119104-1|AAM50964.1| 1151|Drosophila melanogaster RE07981p
           protein.
          Length = 1151

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 595 HDVHTPRCSFWKGKYTRNSTILTQCKTN 512
           H+ H+P C F KG+YT+N  +     TN
Sbjct: 310 HERHSPLCPFVKGEYTQNVPLSITYATN 337


>AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing
           ubiquitin-conjugatingenzyme protein.
          Length = 4876

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 595 HDVHTPRCSFWKGKYTRNSTILTQCKTN 512
           H+ H+P C F KG+YT+N  +     TN
Sbjct: 310 HERHSPLCPFVKGEYTQNVPLSITYATN 337


>AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA
           protein.
          Length = 4876

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 595 HDVHTPRCSFWKGKYTRNSTILTQCKTN 512
           H+ H+P C F KG+YT+N  +     TN
Sbjct: 310 HERHSPLCPFVKGEYTQNVPLSITYATN 337


>AY121644-1|AAM51971.1|  978|Drosophila melanogaster LD11689p
           protein.
          Length = 978

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = -2

Query: 488 TKL*IEAPQEPL-FDC*IVSY*QILSLLTPPSNKKPLRISWYRENIIPIAETSLCVRIRN 312
           T + +  P  PL  D  +VS     S LTPPS    + IS     ++   E  L V I  
Sbjct: 619 TYIMVNEPIAPLGIDIDVVSASLETSDLTPPSYSPKIAISGTSNKLVSYQEIKLGVHILE 678

Query: 311 RNCIKNI 291
           + CI ++
Sbjct: 679 KTCIDSV 685


>AJ289018-1|CAC17749.1|  978|Drosophila melanogaster calsyntenin-1
           protein protein.
          Length = 978

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = -2

Query: 488 TKL*IEAPQEPL-FDC*IVSY*QILSLLTPPSNKKPLRISWYRENIIPIAETSLCVRIRN 312
           T + +  P  PL  D  +VS     S LTPPS    + IS     ++   E  L V I  
Sbjct: 619 TYIMVNEPIAPLGIDIDVVSASLETSDLTPPSYSPKIAISGTSNKLVSYQEIKLGVHILE 678

Query: 311 RNCIKNI 291
           + CI ++
Sbjct: 679 KTCIDSV 685


>AE014135-195|AAN06580.1|  978|Drosophila melanogaster CG11059-PB,
           isoform B protein.
          Length = 978

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = -2

Query: 488 TKL*IEAPQEPL-FDC*IVSY*QILSLLTPPSNKKPLRISWYRENIIPIAETSLCVRIRN 312
           T + +  P  PL  D  +VS     S LTPPS    + IS     ++   E  L V I  
Sbjct: 619 TYIMVNEPIAPLGIDIDVVSASLETSDLTPPSYSPKIAISGTSNKLVSYQEIKLGVHILE 678

Query: 311 RNCIKNI 291
           + CI ++
Sbjct: 679 KTCIDSV 685


>AE014135-194|AAF59384.2|  978|Drosophila melanogaster CG11059-PA,
           isoform A protein.
          Length = 978

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = -2

Query: 488 TKL*IEAPQEPL-FDC*IVSY*QILSLLTPPSNKKPLRISWYRENIIPIAETSLCVRIRN 312
           T + +  P  PL  D  +VS     S LTPPS    + IS     ++   E  L V I  
Sbjct: 619 TYIMVNEPIAPLGIDIDVVSASLETSDLTPPSYSPKIAISGTSNKLVSYQEIKLGVHILE 678

Query: 311 RNCIKNI 291
           + CI ++
Sbjct: 679 KTCIDSV 685


>BT023583-1|AAY84983.1|  286|Drosophila melanogaster IP09422p
           protein.
          Length = 286

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -3

Query: 694 SSYIIERYSYMLQTQIICGYHQSIHYCQWNHLFHDVHTPRCSFWK 560
           SSY++  Y   L T+I  G  + +   +W  L    H P C  WK
Sbjct: 55  SSYLMAEYGDGLITRIDEGNWKEVLTGEWLLLICSSHQPSCGDWK 99


>BT023571-1|AAY84971.1|  252|Drosophila melanogaster IP09522p
           protein.
          Length = 252

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -3

Query: 694 SSYIIERYSYMLQTQIICGYHQSIHYCQWNHLFHDVHTPRCSFWK 560
           SSY++  Y   L T+I  G  + +   +W  L    H P C  WK
Sbjct: 21  SSYLMAEYGDGLITRIDEGNWKEVLTGEWLLLICSSHQPSCGDWK 65


>AE014296-2057|AAF49991.1|  270|Drosophila melanogaster CG11588-PA
           protein.
          Length = 270

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -3

Query: 694 SSYIIERYSYMLQTQIICGYHQSIHYCQWNHLFHDVHTPRCSFWK 560
           SSY++  Y   L T+I  G  + +   +W  L    H P C  WK
Sbjct: 39  SSYLMAEYGDGLITRIDEGNWKEVLTGEWLLLICSSHQPSCGDWK 83


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,792,948
Number of Sequences: 53049
Number of extensions: 696074
Number of successful extensions: 1409
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1407
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)