Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17o08f
         (754 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   1.1  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   1.9  
Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein...    24   5.8  
AY825564-1|AAV70175.1|  175|Anopheles gambiae cytochrome P450 pr...    24   5.8  
AY825563-1|AAV70174.1|  175|Anopheles gambiae cytochrome P450 pr...    24   5.8  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   7.7  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -2

Query: 426  GSERPQDAAENADFSFSGTD*C*NSGN 346
            GSE+P++A E +  + SGTD   +SG+
Sbjct: 1348 GSEKPKNAIEPSQEAVSGTDNANDSGD 1374


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 624 LRSRGQPCSGVRRPTRHQQITVNYSNDTCESK 719
           L +   P  G RRPT++QQI   +++D  E++
Sbjct: 16  LANEFNPNRGRRRPTKNQQIYGVWADDDSENE 47


>Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 583 VNNFLEKIPVYLTDYAAEVS 642
           VN   EK+P YL++ +A V+
Sbjct: 88  VNAIYEKLPAYLSEVSARVN 107


>AY825564-1|AAV70175.1|  175|Anopheles gambiae cytochrome P450
           protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = -2

Query: 669 ELGDVLQNTADLGCVVRQVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDND 490
           +LGD  +N  D+G   R    DL+ E  +  +N + EEI  EV   +   + ++    + 
Sbjct: 1   DLGDNDEN--DIGEKRRLAFLDLMIETANNGANISDEEIKEEVDTIMFEGHDTTAAGSSF 58

Query: 489 VVC 481
           V+C
Sbjct: 59  VLC 61


>AY825563-1|AAV70174.1|  175|Anopheles gambiae cytochrome P450
           protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = -2

Query: 669 ELGDVLQNTADLGCVVRQVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDND 490
           +LGD  +N  D+G   R    DL+ E  +  +N + EEI  EV   +   + ++    + 
Sbjct: 1   DLGDNDEN--DIGEKRRLAFLDLMIETANNGANISDEEIKEEVDTIMFEGHDTTAAGSSF 58

Query: 489 VVC 481
           V+C
Sbjct: 59  VLC 61


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
 Frame = +1

Query: 196 DGYAGSWSPPGASDI-INFSGRVTDVKADDFSSLHLRRVSYVGTRLNLVLAVPRVSASV 369
           DG  G    P   +  ++ +GR T     D+ S+    +      +N++LAV     SV
Sbjct: 315 DGKLGGVITPNDGECHLDHNGRYTHSTTQDYPSISQINLKVKQNAINVILAVTAEELSV 373


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,739
Number of Sequences: 2352
Number of extensions: 14066
Number of successful extensions: 90
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 90
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)