Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17n22f
(744 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003793-1|AAO41476.1| 1000|Drosophila melanogaster GH07384p pro... 254 1e-67
AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA ... 254 1e-67
AY118713-1|AAM50573.1| 719|Drosophila melanogaster AT25933p pro... 32 0.72
AE014298-1445|AAN09259.1| 719|Drosophila melanogaster CG32686-P... 32 0.72
AE014298-1444|AAN09258.1| 1082|Drosophila melanogaster CG32686-P... 32 0.72
U57758-1|AAB49932.1| 360|Drosophila melanogaster putative thyro... 30 3.8
AY071174-1|AAL48796.1| 195|Drosophila melanogaster RE22911p pro... 30 3.8
AY069836-1|AAL39981.1| 444|Drosophila melanogaster SD08021p pro... 30 3.8
AF129079-1|AAD28604.1| 444|Drosophila melanogaster COP9 signalo... 30 3.8
AE014297-1902|AAX52952.1| 1357|Drosophila melanogaster CG33555-P... 30 3.8
AE014297-892|AAF54348.1| 195|Drosophila melanogaster CG9740-PA ... 30 3.8
AE014134-1594|AAF52736.1| 444|Drosophila melanogaster CG9556-PB... 30 3.8
AE014134-1593|AAN10685.1| 444|Drosophila melanogaster CG9556-PA... 30 3.8
>BT003793-1|AAO41476.1| 1000|Drosophila melanogaster GH07384p
protein.
Length = 1000
Score = 254 bits (621), Expect = 1e-67
Identities = 122/243 (50%), Positives = 170/243 (69%), Gaps = 2/243 (0%)
Frame = +1
Query: 22 MAGDQAQFYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAA 201
MA DQA F QLL +LLSTDND+R QAE+AYNN+ E KV HL+ +IQN +E+ RQ AA
Sbjct: 1 MAADQAHFQQLLASLLSTDNDVRQQAEEAYNNLSRELKVTHLLGNIQNGQQSEEARQMAA 60
Query: 202 VLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDD 381
VLLRRLF+ Q L +Q+LL +Q +++ LRRK+C+VV+E+ARN ID+
Sbjct: 61 VLLRRLFTTEFFDFYKGLPAESQNQLLQQILLAVQQEVTPQLRRKICEVVAEVARNLIDE 120
Query: 382 DGNNQWPEFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISALQP 561
D NNQWP+ LQF+F CA++ P ++E+ +R+F+SVP +FGN++ + +D+IK ML ++
Sbjct: 121 DCNNQWPDILQFLFQCANSPTPQLQESALRIFSSVPSIFGNQEAQYIDLIKQMLAKSMDA 180
Query: 562 NESMALRTQAVKAVGAFILLHDK--EPIIQKHFSDVLLPLMQVIVLSIEAADDDSALKVL 735
+R QAV+AVGAFIL HDK E I KHF+D+L ++ + +IEA DD S LK+L
Sbjct: 181 GSDPEVRVQAVRAVGAFILYHDKENETAIHKHFADMLPRMIHITGETIEAQDDQSLLKLL 240
Query: 736 IEL 744
IE+
Sbjct: 241 IEM 243
>AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA
protein.
Length = 1105
Score = 254 bits (621), Expect = 1e-67
Identities = 122/243 (50%), Positives = 170/243 (69%), Gaps = 2/243 (0%)
Frame = +1
Query: 22 MAGDQAQFYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAA 201
MA DQA F QLL +LLSTDND+R QAE+AYNN+ E KV HL+ +IQN +E+ RQ AA
Sbjct: 1 MAADQAHFQQLLASLLSTDNDVRQQAEEAYNNLSRELKVTHLLGNIQNGQQSEEARQMAA 60
Query: 202 VLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDD 381
VLLRRLF+ Q L +Q+LL +Q +++ LRRK+C+VV+E+ARN ID+
Sbjct: 61 VLLRRLFTTEFFDFYKGLPAESQNQLLQQILLAVQQEVTPQLRRKICEVVAEVARNLIDE 120
Query: 382 DGNNQWPEFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISALQP 561
D NNQWP+ LQF+F CA++ P ++E+ +R+F+SVP +FGN++ + +D+IK ML ++
Sbjct: 121 DCNNQWPDILQFLFQCANSPTPQLQESALRIFSSVPSIFGNQEAQYIDLIKQMLAKSMDA 180
Query: 562 NESMALRTQAVKAVGAFILLHDK--EPIIQKHFSDVLLPLMQVIVLSIEAADDDSALKVL 735
+R QAV+AVGAFIL HDK E I KHF+D+L ++ + +IEA DD S LK+L
Sbjct: 181 GSDPEVRVQAVRAVGAFILYHDKENETAIHKHFADMLPRMIHITGETIEAQDDQSLLKLL 240
Query: 736 IEL 744
IE+
Sbjct: 241 IEM 243
>AY118713-1|AAM50573.1| 719|Drosophila melanogaster AT25933p
protein.
Length = 719
Score = 32.3 bits (70), Expect = 0.72
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = -2
Query: 743 NSMSTFNAESSSAASIDRTITCIKGRRTSLKCF---CMMGSLSCSSIKAPTALTA*VRKA 573
+SMST + S++ +S I CI G RTS + G+L SIK LT+ V +
Sbjct: 7 SSMSTSSPHSNTTSSKTSVIECINGIRTSSTVQQNPGIQGALGSKSIK----LTSTVMRL 62
Query: 572 IDSFGCKADINMPFI 528
I K D+ P I
Sbjct: 63 IQPVASKGDVESPEI 77
>AE014298-1445|AAN09259.1| 719|Drosophila melanogaster CG32686-PA,
isoform A protein.
Length = 719
Score = 32.3 bits (70), Expect = 0.72
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = -2
Query: 743 NSMSTFNAESSSAASIDRTITCIKGRRTSLKCF---CMMGSLSCSSIKAPTALTA*VRKA 573
+SMST + S++ +S I CI G RTS + G+L SIK LT+ V +
Sbjct: 7 SSMSTSSPHSNTTSSKTSVIECINGIRTSSTVQQNPGIQGALGSKSIK----LTSTVMRL 62
Query: 572 IDSFGCKADINMPFI 528
I K D+ P I
Sbjct: 63 IQPVASKGDVESPEI 77
>AE014298-1444|AAN09258.1| 1082|Drosophila melanogaster CG32686-PB,
isoform B protein.
Length = 1082
Score = 32.3 bits (70), Expect = 0.72
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = -2
Query: 743 NSMSTFNAESSSAASIDRTITCIKGRRTSLKCF---CMMGSLSCSSIKAPTALTA*VRKA 573
+SMST + S++ +S I CI G RTS + G+L SIK LT+ V +
Sbjct: 370 SSMSTSSPHSNTTSSKTSVIECINGIRTSSTVQQNPGIQGALGSKSIK----LTSTVMRL 425
Query: 572 IDSFGCKADINMPFI 528
I K D+ P I
Sbjct: 426 IQPVASKGDVESPEI 440
>U57758-1|AAB49932.1| 360|Drosophila melanogaster putative thyroid
receptor interactingprotein protein.
Length = 360
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 40 QFYQLLNTLLSTD-NDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAE 180
++ L N L+ + N SQ Y N P + +LVNS QN DI E
Sbjct: 279 KYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
>AY071174-1|AAL48796.1| 195|Drosophila melanogaster RE22911p
protein.
Length = 195
Score = 29.9 bits (64), Expect = 3.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 132 KSSAPSEFNSKCRHCRRCASN 194
K P ++ + C HCR+C SN
Sbjct: 32 KDGEPKKYRALCTHCRKCQSN 52
>AY069836-1|AAL39981.1| 444|Drosophila melanogaster SD08021p
protein.
Length = 444
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 40 QFYQLLNTLLSTD-NDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAE 180
++ L N L+ + N SQ Y N P + +LVNS QN DI E
Sbjct: 279 KYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
>AF129079-1|AAD28604.1| 444|Drosophila melanogaster COP9
signalosome subunit 2 CSN2 protein.
Length = 444
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 40 QFYQLLNTLLSTD-NDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAE 180
++ L N L+ + N SQ Y N P + +LVNS QN DI E
Sbjct: 279 KYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
>AE014297-1902|AAX52952.1| 1357|Drosophila melanogaster CG33555-PA,
isoform A protein.
Length = 1357
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 105 RIQQHSNRNK-SSAPSEFNSKCRHCRRCASNGGRAVTKII*CRI 233
+++QH+N N +S PS RHC RC + GR + CR+
Sbjct: 10 QLEQHNNHNAHTSDPS------RHCARCTTELGRITNRGAPCRV 47
>AE014297-892|AAF54348.1| 195|Drosophila melanogaster CG9740-PA
protein.
Length = 195
Score = 29.9 bits (64), Expect = 3.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 132 KSSAPSEFNSKCRHCRRCASN 194
K P ++ + C HCR+C SN
Sbjct: 32 KDGEPKKYRALCTHCRKCQSN 52
>AE014134-1594|AAF52736.1| 444|Drosophila melanogaster CG9556-PB,
isoform B protein.
Length = 444
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 40 QFYQLLNTLLSTD-NDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAE 180
++ L N L+ + N SQ Y N P + +LVNS QN DI E
Sbjct: 279 KYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
>AE014134-1593|AAN10685.1| 444|Drosophila melanogaster CG9556-PA,
isoform A protein.
Length = 444
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 40 QFYQLLNTLLSTD-NDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAE 180
++ L N L+ + N SQ Y N P + +LVNS QN DI E
Sbjct: 279 KYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,632,321
Number of Sequences: 53049
Number of extensions: 688261
Number of successful extensions: 1482
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1477
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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