Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17n20f
(696 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132951-6|CAC44308.2| 692|Caenorhabditis elegans Hypothetical ... 111 3e-25
Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z50863-4|CAL36493.1| 412|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical pr... 39 0.004
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 31 0.60
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z68303-12|CAA92644.2| 969|Caenorhabditis elegans Hypothetical p... 29 3.2
Z68303-1|CAC42387.1| 475|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z68302-9|CAA92636.2| 969|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL031635-1|CAA21039.2| 487|Caenorhabditis elegans Hypothetical ... 29 4.2
AF045646-10|AAU05566.1| 548|Caenorhabditis elegans Skp1 related... 28 5.5
AF045646-9|AAL32223.1| 660|Caenorhabditis elegans Skp1 related ... 28 5.5
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical pr... 28 7.3
U13876-6|AAA21175.2| 444|Caenorhabditis elegans Hypothetical pr... 28 7.3
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 27 9.7
U23521-8|AAC46810.4| 505|Caenorhabditis elegans Hypothetical pr... 27 9.7
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 27 9.7
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 27 9.7
>AL132951-6|CAC44308.2| 692|Caenorhabditis elegans Hypothetical
protein Y67H2A.7 protein.
Length = 692
Score = 111 bits (268), Expect = 3e-25
Identities = 63/162 (38%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
Frame = +2
Query: 149 DSLKERTGLFNKPELTTFEGFYTLKDQAIEATDRLIEEATNSPTRPM--VEIFDELSDTL 322
+ + + TGLF L T E F L ++TD LI+E P ++I D++S+ +
Sbjct: 26 EKVDKETGLFGNKNLKTAESFNELPAAVKKSTDALIQELLTPSQNPRTSIQIVDDISNEI 85
Query: 323 CKVADLAEFVRIAHPQPHFARAAEEACISISGVVEKLNTHKGLYEALKKSVENGTSG--- 493
CK ADLAE VR H +P F AAE+ + +VE LNT+ LY+ LK S +S
Sbjct: 86 CKSADLAECVRQLHSEPEFRNAAEDVSRNFCELVESLNTNTALYQKLKSSEITESSRLDD 145
Query: 494 -DKHLAELFLFDFEQSGIHLEENKRKSVVALNDVILQTGQRF 616
DK L L DFEQSG+HL++N+++ V L+ I G RF
Sbjct: 146 VDKRTLTLLLDDFEQSGVHLKDNQKEQFVQLSSEIFDAGARF 187
>Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +2
Query: 383 RAAEEACISISGVVEKLNTHKGLYEALKKSVENGTSGDKHLAELFLFDFEQSGIHLE--- 553
R EEA + +EK++ ++ LYEA KKS EN S KHL E L + ++ HLE
Sbjct: 578 RRYEEAKYRLKNALEKIHDYELLYEAAKKS-ENDGSISKHLEE-ELIEVKEFNAHLERQF 635
Query: 554 ENKRKSVVALNDVILQ 601
+++ + AL +LQ
Sbjct: 636 QSQSDIIEALKKKLLQ 651
>Z50863-4|CAL36493.1| 412|Caenorhabditis elegans Hypothetical
protein C14H10.2b protein.
Length = 412
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +2
Query: 383 RAAEEACISISGVVEKLNTHKGLYEALKKSVENGTSGDKHLAELFLFDFEQSGIHLE--- 553
R EEA + +EK++ ++ LYEA KKS EN S KHL E L + ++ HLE
Sbjct: 244 RRYEEAKYRLKNALEKIHDYELLYEAAKKS-ENDGSISKHLEE-ELIEVKEFNAHLERQF 301
Query: 554 ENKRKSVVALNDVILQ 601
+++ + AL +LQ
Sbjct: 302 QSQSDIIEALKKKLLQ 317
>Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +2
Query: 383 RAAEEACISISGVVEKLNTHKGLYEALKKSVENGTSGDKHLAELFLFDFEQSGIHLE--- 553
R EEA + +EK++ ++ LYEA KKS EN S KHL E L + ++ HLE
Sbjct: 578 RRYEEAKYRLKNALEKIHDYELLYEAAKKS-ENDGSISKHLEE-ELIEVKEFNAHLERQF 635
Query: 554 ENKRKSVVALNDVILQ 601
+++ + AL +LQ
Sbjct: 636 QSQSDIIEALKKKLLQ 651
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 31.5 bits (68), Expect = 0.60
Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 1/177 (0%)
Frame = +2
Query: 152 SLKER-TGLFNKPELTTFEGFYTLKDQAIEATDRLIEEATNSPTRPMVEIFDELSDTLCK 328
+L+ R T ++ + TT E T+ DQ + D EEA +PTR I ++ K
Sbjct: 1145 ALRNRFTEVWTSSDYTTSE-LVTIFDQRLARVDATREEARITPTRTATTIVSWIAVFFGK 1203
Query: 329 VADLAEFVRIAHPQPHFARAAEEACISISGVVEKLNTHKGLYEALKKSVENGTSGDKHLA 508
+ + R A AE ++ +E K A+ G + H+
Sbjct: 1204 YSHV---FRHAPSVRDVVACAELYASAMQAQIENTTAIKDALCAVFLDSLAGLTTRLHID 1260
Query: 509 ELFLFDFEQSGIHLEENKRKSVVALNDVILQTGQRFMAGAAKPRRVSRSAVPQNVRH 679
+ +FD + +H E K + + L+DV Q+F+ A K + ++ NV H
Sbjct: 1261 PVEVFDDALTMLHSELVKTQLLGQLSDV-----QKFIGEAKKDALIEHASQHLNVGH 1312
>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
protein W02C12.1 protein.
Length = 1372
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 236 EATDRLIEEATNSPTRPMVEIFDELSDTLCKVADLAEFVRIAHPQPHFAR 385
E D+ I+E SP + + DE++ +C+ AD E V H H A+
Sbjct: 97 ENCDQNIDECAASPCQNDAKCIDEINGYMCECADGYEGVHCQHLVDHCAK 146
>Z68303-12|CAA92644.2| 969|Caenorhabditis elegans Hypothetical
protein ZK792.1a protein.
Length = 969
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = +1
Query: 13 ESYNEV--IETPLDPPKWQKEEIGMLCQYL 96
ES NE+ + L+ P W+KE+I +CQ+L
Sbjct: 36 ESDNEIETSDVQLEKPIWKKEDIREMCQFL 65
>Z68303-1|CAC42387.1| 475|Caenorhabditis elegans Hypothetical
protein ZK792.1b protein.
Length = 475
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = +1
Query: 13 ESYNEV--IETPLDPPKWQKEEIGMLCQYL 96
ES NE+ + L+ P W+KE+I +CQ+L
Sbjct: 36 ESDNEIETSDVQLEKPIWKKEDIREMCQFL 65
>Z68302-9|CAA92636.2| 969|Caenorhabditis elegans Hypothetical
protein ZK792.1a protein.
Length = 969
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = +1
Query: 13 ESYNEV--IETPLDPPKWQKEEIGMLCQYL 96
ES NE+ + L+ P W+KE+I +CQ+L
Sbjct: 36 ESDNEIETSDVQLEKPIWKKEDIREMCQFL 65
>AL031635-1|CAA21039.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.1 protein.
Length = 487
Score = 28.7 bits (61), Expect = 4.2
Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Frame = +2
Query: 71 KLGCSVSTWSPLATAFNTRPNSRPIFDSLKERTGLFNKPELTTFEGFYTLKDQAIEATDR 250
++ C + + L + NT P+ PI ++ + NK T EGF +KD+ + T+
Sbjct: 341 RVPCRQAHFYHLRHSHNTVPSPTPI--NMSPLADMLNKQWQTRVEGFTGMKDEVLNKTN- 397
Query: 251 LIEEATNSPTRPMVEIFDELSDTLCKVADLAEFVRIAHPQPHFARAAEEA-CISISGVVE 427
E R M I DE KV+ R P F+R E C++++ E
Sbjct: 398 --TEYLEDFDRCMGAINDE--HWTMKVS------RCLTPHVCFSRLRREVDCVAVASEYE 447
Query: 428 KLNTHKGLY 454
+ KG +
Sbjct: 448 FYRSGKGYF 456
>AF045646-10|AAU05566.1| 548|Caenorhabditis elegans Skp1 related
(ubiquitin ligasecomplex component) protein 18, isoform
b protein.
Length = 548
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2
Query: 386 AAEEACISI--SGVVEKLNTHKGLYEALKKSVENGTSGDKHLAELFL 520
AA++A I + SG V L+ YE L K+ E + GD+H A L
Sbjct: 483 AAKDAKIGLRMSGKVAGLDAFMPFYENLLKNYEQYSMGDEHFAMTIL 529
>AF045646-9|AAL32223.1| 660|Caenorhabditis elegans Skp1 related
(ubiquitin ligasecomplex component) protein 18, isoform
a protein.
Length = 660
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2
Query: 386 AAEEACISI--SGVVEKLNTHKGLYEALKKSVENGTSGDKHLAELFL 520
AA++A I + SG V L+ YE L K+ E + GD+H A L
Sbjct: 483 AAKDAKIGLRMSGKVAGLDAFMPFYENLLKNYEQYSMGDEHFAMTIL 529
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -1
Query: 639 LGLAAPAMNLCPVWRITSLRATTLFLLFSSRCIPLCSKSNKNNSAKCL 496
LG +AP M PV + + + L + +CI C K+NS +C+
Sbjct: 756 LGTSAPVMQTIPVVPVATAPVASTQLC-APKCISDCQGLCKSNSPQCI 802
>Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical
protein F25D7.3 protein.
Length = 817
Score = 27.9 bits (59), Expect = 7.3
Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 6/112 (5%)
Frame = +2
Query: 359 AHPQPH----FARAAEEACISISGVVEKLNTHKGLYEALKKSVENG--TSGDKHLAELFL 520
AH PH ++ + S S + G+ + ++VE SGD++LAEL +
Sbjct: 22 AHSPPHSPLSVGVSSASSATSSSSTPPSSTSPAGVSASGARNVETDWKQSGDENLAELCI 81
Query: 521 FDFEQSGIHLEENKRKSVVALNDVILQTGQRFMAGAAKPRRVSRSAVPQNVR 676
F + L KR ++IL++ + K S +P+ VR
Sbjct: 82 FHVPDKSVSLPNPKRAECTLPMNLILKSSSK---NRKKSSIWSSDHIPRGVR 130
>U13876-6|AAA21175.2| 444|Caenorhabditis elegans Hypothetical
protein F57B9.8 protein.
Length = 444
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 14 KATMKLLKPLWILRNGRKKKLGCSVSTWSPLATAFNTRPNSRPIFDSLKERTGLFNK 184
+ TM + + G+K K + ST A +T P S P+ D ++TG NK
Sbjct: 357 RPTMSQVVQMMYEITGKKDKTSVNKSTGQLRAKMMSTGPMSDPMRDKTAKKTGRRNK 413
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +2
Query: 188 ELTTFEGFYTLKDQAIEATDRLIEEAT----NSPTRPMVEIFDELSDTLCKVADLAEFVR 355
E+ +G + + +A+ RLIE T NS R + E+ + + C+V DLA
Sbjct: 2505 EVNPVKGSFLKELRALAQRKRLIENDTSIDSNSKRRKIAELKLHIKGSTCRVEDLALNFT 2564
Query: 356 IAHPQPHFARAAEE 397
+ P F A E
Sbjct: 2565 VNPPSKVFQYAEME 2578
>U23521-8|AAC46810.4| 505|Caenorhabditis elegans Hypothetical
protein F41C3.3 protein.
Length = 505
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +2
Query: 305 ELSDTLCKVADLAEFVRIAHPQPHFARAAEEACISISGVVEKLNTHKGLYEALKKSVEN 481
EL D + + + E IA P P F A + V ++ K L +KK V N
Sbjct: 412 ELEDFIDTLPFVKESAVIASPHPDFGEAVVAIVVPSEKVTDEKEFEKKLIGIMKKKVAN 470
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +2
Query: 158 KERTGLFNKPELTTFEGFYTLKDQAIEATDRLIEEATNSPTRPMVEIFDE---LSDTLCK 328
K RT + N+ F L+ + +RL+E T S + FDE +D L K
Sbjct: 797 KTRTDISNRIREAVKGRFRELRRARVIPLNRLVERITESRDADLWSYFDEKADAADVLEK 856
Query: 329 VADLAE 346
+DL+E
Sbjct: 857 SSDLSE 862
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +2
Query: 158 KERTGLFNKPELTTFEGFYTLKDQAIEATDRLIEEATNSPTRPMVEIFDE---LSDTLCK 328
K RT + N+ F L+ + +RL+E T S + FDE +D L K
Sbjct: 797 KTRTDISNRIREAVKGRFRELRRARVIPLNRLVERITESRDADLWSYFDEKADAADVLEK 856
Query: 329 VADLAE 346
+DL+E
Sbjct: 857 SSDLSE 862
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,358,193
Number of Sequences: 27780
Number of extensions: 345466
Number of successful extensions: 992
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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