Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17n12f
(741 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 52 9e-08
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 45 1e-05
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 40 3e-04
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 39 7e-04
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo... 38 0.002
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 36 0.006
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 34 0.019
SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces ... 33 0.043
SPAC22E12.13c |rpl2403|rpl24-3|60S ribosomal protein L24-3 |Schi... 32 0.075
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 28 1.2
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 28 1.6
SPBC3H7.05c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 2.1
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 27 3.7
SPBC582.04c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 3.7
SPBC3F6.02c |||3 beta-hydroxysteroid dehydrogenase/delta 5-->4-i... 26 4.9
SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr ... 26 4.9
SPAC12G12.15 |sif3||Sad1 interacting factor 3|Schizosaccharomyce... 26 4.9
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 26 6.5
SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces... 26 6.5
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 26 6.5
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 8.6
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 25 8.6
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 52.0 bits (119), Expect = 9e-08
Identities = 30/108 (27%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Frame = +1
Query: 274 QTFHVNRALPVDCSQAHLFNSFMIPQINCFLDGCDTSVVVFGQSQTGKTYTLFG--PGFE 447
+T+ ++ + Q LF + + P + L+G + ++ +GQ+ TGKTYT+ G +
Sbjct: 118 KTYAFDKVFGPEADQLMLFENSVAPMLEQVLNGYNCTIFAYGQTGTGKTYTMSGDLSDSD 177
Query: 448 CIHSECDQGIVPRFLTEIFHKLNQMSEREFILHITWMQVVTNNIFDVL 591
I SE G++PR L ++F L+ S +E+ + ++ ++ I D+L
Sbjct: 178 GILSE-GAGLIPRALYQLFSSLDN-SNQEYAVKCSYYELYNEEIRDLL 223
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 45.2 bits (102), Expect = 1e-05
Identities = 29/121 (23%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = +1
Query: 235 SNPVTQIVITESGQTFHVNRALPVDCSQAHLFNSFMIPQINCFLDGCDTSVVVFGQSQTG 414
++ I ++ F +R +Q +F+ + ++ G + +V+ +GQ+ +G
Sbjct: 30 NDSTVHIETSDYSGNFVFDRVFHPSSTQNDIFSYSIESTVDDLFLGYNGTVLAYGQTGSG 89
Query: 415 KTYTLFGPGFECIHSECD-QGIVPRFLTEIFHKL-NQMSEREFILHITWMQVVTNNIFDV 588
KTYT+ G I + + +G+ PR L IF K+ + S E+ + +++M++ I D+
Sbjct: 90 KTYTMMG-----IENNFEKEGMTPRMLRRIFDKIRDSPSTTEYEVKVSYMEIYMEKIHDL 144
Query: 589 L 591
L
Sbjct: 145 L 145
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 40.3 bits (90), Expect = 3e-04
Identities = 23/102 (22%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +1
Query: 289 NRALPVDCSQAHLFNSFMIPQINCFLDGCDTSVVVFGQSQTGKTYTLFGPGFECIHSECD 468
+R +Q ++ P ++ LDG + ++ +G + GKT+T+ G + D
Sbjct: 108 DRVFDETATQQQVYERTARPLLDNILDGFNATIFAYGATGCGKTHTISG-------TMQD 160
Query: 469 QGIVPRFLTEIFHKLNQM-SEREFILHITWMQVVTNNIFDVL 591
G++ L E+F +++ + E+ F L ++++++ I D+L
Sbjct: 161 PGLIYLTLKELFERMDHLRDEKIFDLRLSYLEIYNETIRDLL 202
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 39.1 bits (87), Expect = 7e-04
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 292 RALPVDCSQAHLFNSFMIPQI-NCFLDGCDTSVVVFGQSQTGKTYTLFGP 438
+ P C+Q +F++ P I + ++ DT + G S GKTYTLFGP
Sbjct: 58 KVFPPSCTQLDVFSTICAPLIADSLVNMNDTLLFTLGVSGAGKTYTLFGP 107
>SPBC1604.20c |tea2|klp4|kinesin-like protein
Tea2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 37.9 bits (84), Expect = 0.002
Identities = 22/108 (20%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Frame = +1
Query: 274 QTFHVNRALPVDCSQAHLFNSFMIPQINCFLDGCDTSVVVFGQSQTGKTYTLFGPGFECI 453
Q + N ++ ++ + + G + V +G + TGKTY++ G
Sbjct: 177 QEYLFNNVFGMESKNYDIYKRSVKSVVRNVFSGYNGIVFAYGMTGTGKTYSMQG------ 230
Query: 454 HSECDQGIVPRFLTEIFHKL-NQMSEREFILHITWMQVVTNNIFDVLG 594
+E + GI+P + ++F + N + F + I+++++ I D++G
Sbjct: 231 -TENEPGIIPLAMNDLFEMVENNSDDDTFQIRISYLEIYNERIRDLIG 277
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 35.9 bits (79), Expect = 0.006
Identities = 23/109 (21%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Frame = +1
Query: 280 FHVNRALPVDCSQAHLFNSFMIPQINCFLDGCDTSVVVFGQSQTGKTYTLFGPGFECIHS 459
F+ +R + + +FN + I +DG + + +GQ+ +GKT+T+
Sbjct: 525 FNFDRVFSPETTNEDVFNE-LSQLIQSAMDGYNVCIFAYGQTGSGKTHTM---------- 573
Query: 460 ECDQGIVPRFLTEIFHKLNQMSER--EFILHITWMQVVTNNIFDVLGVG 600
+ G++P + I+++ + ER E+ + ++++ I D+L G
Sbjct: 574 SSNTGMIPSSVRMIYNRSTSLKERGWEYRMEGQFLEIYNETIIDLLASG 622
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 34.3 bits (75), Expect = 0.019
Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +1
Query: 352 INCFLDGCDTSVVVFGQSQTGKTYTLFGPGFECIHSECDQGIVPRFLTEIFHKLNQMSER 531
I +DG + S+ +GQ+ +GKTYT+ G++ + IF+ L+ + E+
Sbjct: 560 IQSAIDGYNVSIFAYGQTGSGKTYTM----------SSQDGMIAMSIKHIFNYLSTLREK 609
Query: 532 EFI--LHITWMQVVTNNIFDVL 591
++ L ++++ I+D+L
Sbjct: 610 GWVYKLRGQFLEIYNETIYDLL 631
>SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 511
Score = 33.1 bits (72), Expect = 0.043
Identities = 18/84 (21%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +1
Query: 352 INCFLDGCDTSVVVFGQSQTGKTYTLFGPGFECIHSECDQGIVPRFLTEIFHKLNQMSER 531
+ L+G ++ + +GQ TGKTY++ G GI+P IF +++++ ++
Sbjct: 92 VKSILEGFNSCFITYGQKGTGKTYSVVG-------LRGQPGIIPHISESIFEEIDKLKKK 144
Query: 532 E----FILHITWMQVVTNNIFDVL 591
+ I+ +++ +D+L
Sbjct: 145 SPNTTITVSISLAEIIEETPYDLL 168
>SPAC22E12.13c |rpl2403|rpl24-3|60S ribosomal protein L24-3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 192
Score = 32.3 bits (70), Expect = 0.075
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = -1
Query: 441 AWTKERVSFASLTLTKNNNRCITAIEETVYLRYHKRIEQMSLTTINRQSSIHMKRLSTFR 262
AWTK + + +TA V +RY + + +L + R S +H KR F
Sbjct: 50 AWTKAYRKAHGKEMVYDTALAVTAARRNVPVRYDRNVIATTLNAMKRVSQVHAKRERLFY 109
Query: 261 NNNL-GYRITE 232
L G R E
Sbjct: 110 KKRLAGKRAQE 120
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 28.3 bits (60), Expect = 1.2
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = -3
Query: 439 LDQRACKFCQSDSDQKQQQMYHSH 368
+DQ AC+ CQ D+++++++ H
Sbjct: 669 VDQHACQLCQRSLDKEEEKLFVEH 692
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -1
Query: 540 YKFSLRHLIQFVKYFS*KSWNDSLITFTVNALEAWTKERVSFASLTLTKNNNR 382
Y +++L QFV+YF+ KS N + F ++ ++ V LT ++ N R
Sbjct: 2712 YPTEIKYLHQFVEYFAQKSPNSCALEFALDI----NQDSVQLIRLTYSELNER 2760
>SPBC3H7.05c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 357
Score = 27.5 bits (58), Expect = 2.1
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 728 PLVPTHFCSTVTVNTVW*FPWHCCLQP 648
PL+ + T +VN W WH C +P
Sbjct: 229 PLMMGNVSKTTSVNDFWSRDWHVCTKP 255
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 26.6 bits (56), Expect = 3.7
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 240 SCNPNCYYGKW 272
SC PNCY KW
Sbjct: 260 SCRPNCYVDKW 270
>SPBC582.04c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 601
Score = 26.6 bits (56), Expect = 3.7
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 268 SGQTFHVNRALPVDCSQAHLFNSFMIPQINCFLDGCDTSVVVFGQS 405
SG H+ R D + ++ P + C+ G DTSV+ +G S
Sbjct: 500 SGFHLHITRFEAHDMGKVKDIDTDFEPGLQCYQVGSDTSVLRYGLS 545
>SPBC3F6.02c |||3 beta-hydroxysteroid dehydrogenase/delta
5-->4-isomerase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 340
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 59 FWDFSAKIWFLDSNVFSYVVNTNVRISIIIKHPQLWI--FQYKSP 187
FWDF+ IW +V Y++ + +++ W+ F K P
Sbjct: 246 FWDFARAIWAHAGHVPPYIIKFPRPVGMLLATAAEWVCYFLKKEP 290
>SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1237
Score = 26.2 bits (55), Expect = 4.9
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -1
Query: 351 LRYHKRIEQMSLTTINRQSSIHMKRLSTFRNNNLGYRIT 235
L+ ++IE M L + SS KRL T ++NL RIT
Sbjct: 131 LKDSRKIEDMFLIFASSVSSELTKRLGTAYDSNLADRIT 169
>SPAC12G12.15 |sif3||Sad1 interacting factor 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 510
Score = 26.2 bits (55), Expect = 4.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 511 VCEIFQLKILERFLDHIHCECTRSLDQ 431
VCE FQL ++ FL H H + D+
Sbjct: 150 VCEAFQLPKVKHFLKHYHKVRAKKYDE 176
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = -1
Query: 453 NALEAWTKERVSFASLTLTKNNNRCITAIEETVYLRYHKRI 331
N +E W + + S +N+NR + ++ + R H R+
Sbjct: 588 NFVERWFQSVIGVFSFASRENSNRALKILKSAILYRPHLRM 628
>SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 857
Score = 25.8 bits (54), Expect = 6.5
Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Frame = +1
Query: 151 TSSVMDIPVQIAIRLKPPSLADSTQCIFSNPV-TQIVITE--SGQTFHVNRALPVDCSQA 321
+S+V V PPS + I + + T I TE S HVN+ + +
Sbjct: 150 SSAVKSANVSFPSSSTPPSSDSNFSSIQNTDLNTSIKFTENISANAIHVNQDKVIRSANN 209
Query: 322 HLFNSFMIPQINCFLDGCDTSVVVFGQSQTGKTYTL 429
+ NS I + FLD + + S T TY L
Sbjct: 210 LIINSQPILPVRSFLDALGEPIYL---SPTSSTYFL 242
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 25.8 bits (54), Expect = 6.5
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = -1
Query: 588 NIKYIIGDNLHPCYV--KYKFSLRHLIQFVKYFS*KSWNDSLITFTVNALEAWTKERVSF 415
NI +I D+++ KY+ S+ K K W + + F+ EAW R +
Sbjct: 954 NIYPVIDDSIYELSAASKYQQSINQKGHHRKEDPQKQWQEKELAFSSTLSEAWRTRRKMY 1013
Query: 414 ASLTL 400
A L
Sbjct: 1014 AEAIL 1018
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 132 GLVLLSNILSYGYSSTNRHSFEAPELGRFYS 224
G ++S +L G STN + P + FYS
Sbjct: 3099 GFDIVSVVLMMGVKSTNERQYWTPPVYNFYS 3129
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +2
Query: 53 LSFWDFSAKIWFLDS---NVFSYVVNTNVRISIIIKHPQL 163
L +++ SA++ +S N FSY T +I++ K+PQL
Sbjct: 578 LEYFEKSAQLARTESEMVNAFSYAEATRTQIALTEKYPQL 617
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,295,899
Number of Sequences: 5004
Number of extensions: 71557
Number of successful extensions: 186
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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