Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17n02r
(891 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 423 e-118
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 423 e-118
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 423 e-118
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 423 e-118
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 423 e-118
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 423 e-118
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 423 e-118
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 423 e-118
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 347 2e-95
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 224 3e-58
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 43 0.001
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 42 0.002
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 42 0.002
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 39 0.021
AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens ... 30 9.8
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 423 bits (1042), Expect = e-118
Identities = 193/240 (80%), Positives = 214/240 (89%)
Frame = -1
Query: 765 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 586
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 585 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 406
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKP 120
Query: 405 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 226
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 225 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 46
KAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 423 bits (1042), Expect = e-118
Identities = 193/240 (80%), Positives = 214/240 (89%)
Frame = -1
Query: 765 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 586
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 585 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 406
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKP 120
Query: 405 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 226
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 225 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 46
KAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 423 bits (1042), Expect = e-118
Identities = 193/240 (80%), Positives = 214/240 (89%)
Frame = -1
Query: 765 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 586
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 585 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 406
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKP 120
Query: 405 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 226
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 225 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 46
KAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 423 bits (1041), Expect = e-118
Identities = 192/240 (80%), Positives = 214/240 (89%)
Frame = -1
Query: 765 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 586
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 585 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 406
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 405 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 226
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 225 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 46
KAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 423 bits (1041), Expect = e-118
Identities = 192/240 (80%), Positives = 214/240 (89%)
Frame = -1
Query: 765 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 586
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 585 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 406
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 405 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 226
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 225 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 46
KAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 423 bits (1041), Expect = e-118
Identities = 192/240 (80%), Positives = 214/240 (89%)
Frame = -1
Query: 765 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 586
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 585 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 406
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 405 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 226
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 225 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 46
KAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 423 bits (1041), Expect = e-118
Identities = 192/240 (80%), Positives = 214/240 (89%)
Frame = -1
Query: 765 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 586
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 585 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 406
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 405 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 226
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 225 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 46
KAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 423 bits (1041), Expect = e-118
Identities = 192/240 (80%), Positives = 214/240 (89%)
Frame = -1
Query: 765 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 586
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 585 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 406
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 405 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 226
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 225 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 46
KAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 347 bits (854), Expect = 2e-95
Identities = 157/194 (80%), Positives = 173/194 (89%)
Frame = -1
Query: 627 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGA 448
DIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGT 60
Query: 447 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMV 268
MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +V
Sbjct: 61 MPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVV 120
Query: 267 GIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVK 88
G+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++
Sbjct: 121 GVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIR 180
Query: 87 RGTSAGRKVGLIAA 46
R AGRKVGLIAA
Sbjct: 181 RDAPAGRKVGLIAA 194
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 224 bits (548), Expect = 3e-58
Identities = 102/130 (78%), Positives = 115/130 (88%)
Frame = -1
Query: 753 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 574
IR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FR
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFR 60
Query: 573 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRG 394
DPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG
Sbjct: 61 DPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRG 120
Query: 393 RLARASGNFA 364
+LARASGN+A
Sbjct: 121 KLARASGNYA 130
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 43.2 bits (97), Expect = 0.001
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 5/171 (2%)
Frame = -1
Query: 711 HTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 532
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 531 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNF 367
E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTC 213
Query: 366 ATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 214
++ + ++LPS + + + VG V+ + I KAGR
Sbjct: 214 GVLL--RKVNGHSIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 42.3 bits (95), Expect = 0.002
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Frame = -1
Query: 711 HTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 532
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 531 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNF 367
E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTC 213
Query: 366 ATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 214
++ ++LPS + + + VG V+ + I KAGR
Sbjct: 214 GVLL--RKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 42.3 bits (95), Expect = 0.002
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Frame = -1
Query: 711 HTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 532
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 531 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNF 367
E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTC 213
Query: 366 ATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 214
++ ++LPS + + + VG V+ + I KAGR
Sbjct: 214 GVLL--RKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 39.1 bits (87), Expect = 0.021
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Frame = -1
Query: 555 TRKELFIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGR 391
+RK IA E + G + + G+ A G+ P+GA+P GT++ N+E + G +
Sbjct: 143 SRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQ 202
Query: 390 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 214
RA+G ++ ++LPS + + + VG V+ + I KAGR
Sbjct: 203 YIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 259
>AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens
cDNA FLJ42789 fis, clone BRAWH3007221. ).
Length = 163
Score = 30.3 bits (65), Expect = 9.8
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 185 LRLTLYLWYAL-PAFKIGLSIRPPPATIPTMPL 280
L LT +L+ A P F++ +S+ PPP ++P P+
Sbjct: 87 LFLTHFLYLAASPCFRLSVSLFPPPLSLPRSPI 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,746,859
Number of Sequences: 237096
Number of extensions: 3308997
Number of successful extensions: 7106
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7104
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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