Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17l20f
(751 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 260 2e-70
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 145 7e-36
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 142 5e-35
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 129 4e-31
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 124 1e-29
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 117 2e-27
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 108 7e-25
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 104 2e-23
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 57 3e-09
SPBC947.05c |||ferric-chelate reductase |Schizosaccharomyces pom... 29 0.54
SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|... 28 1.2
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 26 5.0
SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomy... 25 8.7
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 260 bits (637), Expect = 2e-70
Identities = 124/205 (60%), Positives = 157/205 (76%)
Frame = +2
Query: 137 DEYGRPFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVT 316
D+ G PFI++RDQ++++RL G DA+KSHI A + +A+ +RTSLGPRGLDK+++S DG++T
Sbjct: 12 DDQGNPFILVRDQEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEIT 71
Query: 317 VTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIH 496
VTNDGATIL M+VEHQI KLLVQL++SQDDEIGDGTTGVVVLAGALLEQA L+DKGIH
Sbjct: 72 VTNDGATILDQMEVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIH 131
Query: 497 PIRIADGYEMAAALALTHLDSVSEAFPVNKNTRENLIKVAMTTLGSKVVVKCHRLMAEIX 676
PIRIADGYE A +A+ HLD++S+ + NL + A T+LGSKVV K H A I
Sbjct: 132 PIRIADGYEKACQVAVKHLDAISDVVDFSPENTTNLFRSAKTSLGSKVVSKAHDHFANIA 191
Query: 677 XXXXXXXXXXETRDVNFELIKVEGK 751
+ +DV+FELIKV+GK
Sbjct: 192 VDAVLSVADLQRKDVDFELIKVDGK 216
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 145 bits (351), Expect = 7e-36
Identities = 71/153 (46%), Positives = 103/153 (67%)
Frame = +2
Query: 185 KRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEH 364
++++G D ++ A IA+ +++SLGP GLDK++V GDVTVTNDGATIL ++DVEH
Sbjct: 15 EKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEH 74
Query: 365 QIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALAL 544
GK+LV+LAQ QD E+GDGTT VV++A LL +A+ L+ IHP I GY +A A+
Sbjct: 75 PAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAV 134
Query: 545 THLDSVSEAFPVNKNTRENLIKVAMTTLGSKVV 643
+ V V+ +E+LI VA T++ SK++
Sbjct: 135 KFMTDVLSC-SVDSLGKESLINVAKTSMSSKII 166
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 142 bits (344), Expect = 5e-35
Identities = 77/168 (45%), Positives = 110/168 (65%), Gaps = 1/168 (0%)
Frame = +2
Query: 173 QDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMM 352
QDR+K + S+I AAR +A +RTSLGP+G+DK++ + G+V +TNDGATILK +
Sbjct: 12 QDREKP---QEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHL 68
Query: 353 DVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAA 532
V H K+LV L+ +QD E GDGTT VV+LAG++L A LL KGIHP IA+ ++ AA
Sbjct: 69 SVLHPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAA 128
Query: 533 ALALTHLDSVSE-AFPVNKNTRENLIKVAMTTLGSKVVVKCHRLMAEI 673
+D + E A + + RE+L++ A T+L SK+V + L+A I
Sbjct: 129 GFT---VDCMKENALAIELSDRESLLRAATTSLNSKIVSQYSNLLAPI 173
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 129 bits (312), Expect = 4e-31
Identities = 63/162 (38%), Positives = 103/162 (63%)
Frame = +2
Query: 188 RLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQ 367
R G A S+IQAA+ +A +RT LGPR + K+++ G V +TNDG IL+ ++V H
Sbjct: 14 RQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHP 73
Query: 368 IGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALT 547
K +++LA++QD+E+GDGTT V++LAG +L AS LLD+ IHP+ + ++ A AL+
Sbjct: 74 AAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALS 133
Query: 548 HLDSVSEAFPVNKNTRENLIKVAMTTLGSKVVVKCHRLMAEI 673
+D ++ PVN + + ++ T +G+K+V + LM +
Sbjct: 134 IIDEIT--LPVNVDDNAEMFRLIRTCIGTKLVARWSDLMCHL 173
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 124 bits (300), Expect = 1e-29
Identities = 65/166 (39%), Positives = 99/166 (59%), Gaps = 2/166 (1%)
Frame = +2
Query: 152 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDG 331
P I+L++ + G + S+I A + T+RT+LGP G DKLMV G+V ++NDG
Sbjct: 9 PVIVLKEGTDDSQ--GRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDG 66
Query: 332 ATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIA 511
ATI+K++D+ H K LV +A++QD E+GDGTT VVV AG LL +A ++ G+ I
Sbjct: 67 ATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLII 126
Query: 512 DGYEMAAALALTHLDSVSEAFPVNK--NTRENLIKVAMTTLGSKVV 643
GY AA LA+ + ++ ++ R+ L K A T + SK++
Sbjct: 127 RGYRKAAQLAVNKIKEIAIHLDLSDEGKLRDLLTKCASTAMNSKLI 172
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 117 bits (282), Expect = 2e-27
Identities = 73/202 (36%), Positives = 112/202 (55%), Gaps = 3/202 (1%)
Frame = +2
Query: 152 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVS-SDGDVTVTND 328
P I + Q+R G +A S A + ++++LGP+G+DK++ S S GD+ VTND
Sbjct: 5 PHQIFNESGIQER--GENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTND 62
Query: 329 GATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRI 508
GATILK + +++ K+LV +++ QDDE+GDGTT V V A LL QA +++ IHP I
Sbjct: 63 GATILKSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVI 122
Query: 509 ADGYEMAAALALTHL--DSVSEAFPVNKNTRENLIKVAMTTLGSKVVVKCHRLMAEIXXX 682
DGY +A A+ L S+ + K R +L +A TTL SK++ + A++
Sbjct: 123 IDGYRIATKTAIDALRASSIDNSSDPAK-FRSDLENIARTTLSSKILSQNKNHFAQLAVD 181
Query: 683 XXXXXXXXETRDVNFELIKVEG 748
D N ++IK+ G
Sbjct: 182 AVLRLKGSTNLD-NIQIIKILG 202
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 108 bits (260), Expect = 7e-25
Identities = 55/147 (37%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Frame = +2
Query: 206 AIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLLV 385
A++ +I AA + L+++LGP G K++V G + +T DG +L M +++ +
Sbjct: 17 ALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQIQNPTASCIA 76
Query: 386 QLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVS 565
+ A +QDD GDGTT V +L G LL+QA + +G+HP I+DG+ +A ALT LDS
Sbjct: 77 KAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFLDSFK 136
Query: 566 EAFPVNKNTRENLIKVAMTT-LGSKVV 643
F V++ N+ K +++T + SKVV
Sbjct: 137 TDFEVDREVLLNVAKTSLSTKISSKVV 163
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 104 bits (249), Expect = 2e-23
Identities = 53/145 (36%), Positives = 83/145 (57%)
Frame = +2
Query: 203 DAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLL 382
DA+ + A R+++ RTSLGP G +K++V+ +TND ATI++ ++V H KL+
Sbjct: 26 DAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHPAAKLV 85
Query: 383 VQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSV 562
V Q Q++E+GD VVV G LL +A N++ G+ P+ IA GYEMA + + L+ +
Sbjct: 86 VDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEI 145
Query: 563 SEAFPVNKNTRENLIKVAMTTLGSK 637
+ + LIK T + SK
Sbjct: 146 CADKIETVESEKELIKAIRTCISSK 170
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 56.8 bits (131), Expect = 3e-09
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Frame = +2
Query: 197 GTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATI---LKMMDVEHQ 367
G DA S + +A + +LGP+G + L+ G +T DG T+ + + D
Sbjct: 40 GVDARASLLTGVDTLARAVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFEN 99
Query: 368 IGKLLVQLAQSQDDEI-GDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALAL 544
+G LVQ S+ +E+ GDGTT VL A+ + + G +P+ + G ++A
Sbjct: 100 LGARLVQDVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLA----- 154
Query: 545 THLDSVSEAFPVNK---NTRENLIKVA 616
+D+V E NK T E + +VA
Sbjct: 155 --VDNVVEFLQANKRDITTSEEISQVA 179
>SPBC947.05c |||ferric-chelate reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 564
Score = 29.5 bits (63), Expect = 0.54
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 372 VNYLCNWLRVKMTKLVMVPQGLLFLLVHSLSKPQICWTKVSI 497
+NYL WL V L+ V G+LF++ + S + + K+SI
Sbjct: 146 MNYLHRWLSVYAV-LISVLHGILFMIFSAQSYKPLLYDKISI 186
>SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 405
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2
Query: 263 LGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLL 382
L GLD MVS DGDVT+ DG +L V ++ +LL
Sbjct: 136 LADNGLD--MVSFDGDVTLYEDGQPLLPDNPVISRLIQLL 173
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 256 AKSACNLSGCLYM*LYGIGTGKSFLSILIP 167
+ S +L C Y + GIG K F SI++P
Sbjct: 350 SSSVVDLHYCPYEDILGIGHAKGFESIIVP 379
>SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 874
Score = 25.4 bits (53), Expect = 8.7
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +2
Query: 377 LLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLD 556
L++ A + I D V G + + + +L K I PI + L L H
Sbjct: 739 LVISDAMKLTNNIADALKNNKVNIGTI-KASLEVLVKCIAPI--IPCFSSECWLLLGHNS 795
Query: 557 SVSEAFPVNKNTRENL 604
SV +P++KN +EN+
Sbjct: 796 SVYSNWPISKNKKENM 811
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,070,981
Number of Sequences: 5004
Number of extensions: 63843
Number of successful extensions: 165
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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