Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17l17f
(737 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ013130-1|AAY67799.1| 2014|Homo sapiens leucine-rich repeat kin... 30 7.5
BC132862-1|AAI32863.1| 1316|Homo sapiens ubiquitin specific pept... 30 7.5
BC060846-1|AAH60846.2| 1202|Homo sapiens USP42 protein protein. 30 7.5
AY618868-1|AAT67238.1| 1324|Homo sapiens ubiquitin specific prot... 30 7.5
AK022759-1|BAB14232.1| 1198|Homo sapiens protein ( Homo sapiens ... 30 7.5
AJ601395-1|CAE53097.1| 1325|Homo sapiens ubiquitin-specific prot... 30 7.5
U12569-1|AAB60354.1| 392|Homo sapiens mu opioid receptor varian... 30 10.0
L29301-1|AAA73958.1| 400|Homo sapiens opioid receptor protein. 30 10.0
L25119-1|AAA20580.1| 400|Homo sapiens Mu opiate receptor protein. 30 10.0
BC074927-1|AAH74927.1| 400|Homo sapiens opioid receptor, mu 1 p... 30 10.0
AY587764-1|AAS83107.1| 400|Homo sapiens opioid receptor, mu 1 p... 30 10.0
AY521028-1|AAS00462.1| 400|Homo sapiens mu opioid receptor 1 pr... 30 10.0
AY364230-1|AAR12887.1| 402|Homo sapiens mu opioid receptor vari... 30 10.0
AY309009-1|AAQ77393.1| 402|Homo sapiens mu opioid receptor spli... 30 10.0
AY309008-1|AAQ77392.1| 410|Homo sapiens mu opioid receptor spli... 30 10.0
AY309007-1|AAQ77391.1| 389|Homo sapiens mu opioid receptor spli... 30 10.0
AY309006-1|AAQ77390.1| 403|Homo sapiens mu opioid receptor spli... 30 10.0
AY309005-1|AAQ77389.1| 397|Homo sapiens mu opioid receptor spli... 30 10.0
AY309001-1|AAQ77385.1| 392|Homo sapiens mu opioid receptor spli... 30 10.0
AY225404-1|AAP44727.1| 406|Homo sapiens Mu opioid receptor isof... 30 10.0
AY036623-1|AAK74190.1| 418|Homo sapiens mu opioid receptor vari... 30 10.0
AY036622-1|AAK74189.1| 446|Homo sapiens mu opioid receptor vari... 30 10.0
AL136444-2|CAI20337.1| 462|Homo sapiens opioid receptor, mu 1 p... 30 10.0
AL136444-1|CAC15482.1| 454|Homo sapiens opioid receptor, mu 1 p... 30 10.0
AL132774-1|CAI20458.1| 462|Homo sapiens opioid receptor, mu 1 p... 30 10.0
>DQ013130-1|AAY67799.1| 2014|Homo sapiens leucine-rich repeat kinase
1 protein.
Length = 2014
Score = 30.3 bits (65), Expect = 7.5
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 51 EIRTSEFERHVSWKNRDGCQSRRERLFTGGHRQRNKTAA 167
+++T + R+ KN DG +++R FT RQR+ T A
Sbjct: 497 QLKTLDLSRNQLGKNEDGLKTKRIAFFTTRGRQRSGTEA 535
>BC132862-1|AAI32863.1| 1316|Homo sapiens ubiquitin specific peptidase
42 protein.
Length = 1316
Score = 30.3 bits (65), Expect = 7.5
Identities = 23/79 (29%), Positives = 30/79 (37%)
Frame = +3
Query: 90 KNRDGCQSRRERLFTGGHRQRNKTAAPPRTQHDSRHRHPVAADSGPVHRKRVHRTHHL*I 269
++ G +R R T GHR R + P RH A + P H R +
Sbjct: 959 RSSSGEPARESRSKTEGHRHRRRRTCPRERDRQDRH----APEHHPGHGDR--------L 1006
Query: 270 QETEKRRFGRRIQHHSIKR 326
E+R GR HHS R
Sbjct: 1007 SPGERRSLGRCSHHHSRHR 1025
>BC060846-1|AAH60846.2| 1202|Homo sapiens USP42 protein protein.
Length = 1202
Score = 30.3 bits (65), Expect = 7.5
Identities = 23/79 (29%), Positives = 30/79 (37%)
Frame = +3
Query: 90 KNRDGCQSRRERLFTGGHRQRNKTAAPPRTQHDSRHRHPVAADSGPVHRKRVHRTHHL*I 269
++ G +R R T GHR R + P RH A + P H R +
Sbjct: 959 RSSSGEPARESRSKTEGHRHRRRRTCPRERDRQDRH----APEHHPGHGDR--------L 1006
Query: 270 QETEKRRFGRRIQHHSIKR 326
E+R GR HHS R
Sbjct: 1007 SPGERRSLGRCSHHHSRHR 1025
>AY618868-1|AAT67238.1| 1324|Homo sapiens ubiquitin specific protease
42 protein.
Length = 1324
Score = 30.3 bits (65), Expect = 7.5
Identities = 23/79 (29%), Positives = 30/79 (37%)
Frame = +3
Query: 90 KNRDGCQSRRERLFTGGHRQRNKTAAPPRTQHDSRHRHPVAADSGPVHRKRVHRTHHL*I 269
++ G +R R T GHR R + P RH A + P H R +
Sbjct: 959 RSSSGEPARESRSKTEGHRHRRRRTCPRERDRQDRH----APEHHPGHGDR--------L 1006
Query: 270 QETEKRRFGRRIQHHSIKR 326
E+R GR HHS R
Sbjct: 1007 SPGERRSLGRCSHHHSRHR 1025
>AK022759-1|BAB14232.1| 1198|Homo sapiens protein ( Homo sapiens cDNA
FLJ12697 fis, clone NT2RP1000522, weakly similar to
UBIQUITIN CARBOXYL-TERMINAL HYDROLASE DUB-1 (EC
3.1.2.15). ).
Length = 1198
Score = 30.3 bits (65), Expect = 7.5
Identities = 23/79 (29%), Positives = 30/79 (37%)
Frame = +3
Query: 90 KNRDGCQSRRERLFTGGHRQRNKTAAPPRTQHDSRHRHPVAADSGPVHRKRVHRTHHL*I 269
++ G +R R T GHR R + P RH A + P H R +
Sbjct: 959 RSSSGEPARESRSKTEGHRHRRRRTCPRERDRQDRH----APEHHPGHGDR--------L 1006
Query: 270 QETEKRRFGRRIQHHSIKR 326
E+R GR HHS R
Sbjct: 1007 SPGERRSLGRCSHHHSRHR 1025
>AJ601395-1|CAE53097.1| 1325|Homo sapiens ubiquitin-specific protease
42 protein.
Length = 1325
Score = 30.3 bits (65), Expect = 7.5
Identities = 23/79 (29%), Positives = 30/79 (37%)
Frame = +3
Query: 90 KNRDGCQSRRERLFTGGHRQRNKTAAPPRTQHDSRHRHPVAADSGPVHRKRVHRTHHL*I 269
++ G +R R T GHR R + P RH A + P H R +
Sbjct: 959 RSSSGEPARESRSKTEGHRHRRRRTCPRERDRQDRH----APEHHPGHGDR--------L 1006
Query: 270 QETEKRRFGRRIQHHSIKR 326
E+R GR HHS R
Sbjct: 1007 SPGERRSLGRCSHHHSRHR 1025
>U12569-1|AAB60354.1| 392|Homo sapiens mu opioid receptor variant
protein.
Length = 392
Score = 29.9 bits (64), Expect = 10.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 145 GKETKLPPHQEPNMIVDIVIPSL----LIAALFIGNAFIVLIIYKYRKRK 282
G+++ PP P+MI I I +L + LF GN ++ +I +Y K K
Sbjct: 54 GRDSLCPPTGSPSMITAITIMALYSIVCVVGLF-GNFLVMYVIVRYTKMK 102
>L29301-1|AAA73958.1| 400|Homo sapiens opioid receptor protein.
Length = 400
Score = 29.9 bits (64), Expect = 10.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 145 GKETKLPPHQEPNMIVDIVIPSL----LIAALFIGNAFIVLIIYKYRKRK 282
G+++ PP P+MI I I +L + LF GN ++ +I +Y K K
Sbjct: 54 GRDSLCPPTGSPSMITAITIMALYSIVCVVGLF-GNFLVMYVIVRYTKMK 102
>L25119-1|AAA20580.1| 400|Homo sapiens Mu opiate receptor protein.
Length = 400
Score = 29.9 bits (64), Expect = 10.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 145 GKETKLPPHQEPNMIVDIVIPSL----LIAALFIGNAFIVLIIYKYRKRK 282
G+++ PP P+MI I I +L + LF GN ++ +I +Y K K
Sbjct: 54 GRDSLCPPTGSPSMITAITIMALYSIVCVVGLF-GNFLVMYVIVRYTKMK 102
>BC074927-1|AAH74927.1| 400|Homo sapiens opioid receptor, mu 1
protein.
Length = 400
Score = 29.9 bits (64), Expect = 10.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 145 GKETKLPPHQEPNMIVDIVIPSL----LIAALFIGNAFIVLIIYKYRKRK 282
G+++ PP P+MI I I +L + LF GN ++ +I +Y K K
Sbjct: 54 GRDSLCPPTGSPSMITAITIMALYSIVCVVGLF-GNFLVMYVIVRYTKMK 102
>AY587764-1|AAS83107.1| 400|Homo sapiens opioid receptor, mu 1
protein.
Length = 400
Score = 29.9 bits (64), Expect = 10.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 145 GKETKLPPHQEPNMIVDIVIPSL----LIAALFIGNAFIVLIIYKYRKRK 282
G+++ PP P+MI I I +L + LF GN ++ +I +Y K K
Sbjct: 54 GRDSLCPPTGSPSMITAITIMALYSIVCVVGLF-GNFLVMYVIVRYTKMK 102
>AY521028-1|AAS00462.1| 400|Homo sapiens mu opioid receptor 1
protein.
Length = 400
Score = 29.9 bits (64), Expect = 10.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 145 GKETKLPPHQEPNMIVDIVIPSL----LIAALFIGNAFIVLIIYKYRKRK 282
G+++ PP P+MI I I +L + LF GN ++ +I +Y K K
Sbjct: 54 GRDSLCPPTGSPSMITAITIMALYSIVCVVGLF-GNFLVMYVIVRYTKMK 102
>AY364230-1|AAR12887.1| 402|Homo sapiens mu opioid receptor variant
MOR-1V protein.
Length = 402
Score = 29.9 bits (64), Expect = 10.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 145 GKETKLPPHQEPNMIVDIVIPSL----LIAALFIGNAFIVLIIYKYRKRK 282
G+++ PP P+MI I I +L + LF GN ++ +I +Y K K
Sbjct: 54 GRDSLCPPTGSPSMITAITIMALYSIVCVVGLF-GNFLVMYVIVRYTKMK 102
>AY309009-1|AAQ77393.1| 402|Homo sapiens mu opioid receptor splice
variant hMOR-1Y protein.
Length = 402
Score = 29.9 bits (64), Expect = 10.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 145 GKETKLPPHQEPNMIVDIVIPSL----LIAALFIGNAFIVLIIYKYRKRK 282
G+++ PP P+MI I I +L + LF GN ++ +I +Y K K
Sbjct: 54 GRDSLCPPTGSPSMITAITIMALYSIVCVVGLF-GNFLVMYVIVRYTKMK 102
>AY309008-1|AAQ77392.1| 410|Homo sapiens mu opioid receptor splice
variant hMOR-1B5 protein.
Length = 410
Score = 29.9 bits (64), Expect = 10.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 145 GKETKLPPHQEPNMIVDIVIPSL----LIAALFIGNAFIVLIIYKYRKRK 282
G+++ PP P+MI I I +L + LF GN ++ +I +Y K K
Sbjct: 54 GRDSLCPPTGSPSMITAITIMALYSIVCVVGLF-GNFLVMYVIVRYTKMK 102
>AY309007-1|AAQ77391.1| 389|Homo sapiens mu opioid receptor splice
variant hMOR-1B4 protein.
Length = 389
Score = 29.9 bits (64), Expect = 10.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 145 GKETKLPPHQEPNMIVDIVIPSL----LIAALFIGNAFIVLIIYKYRKRK 282
G+++ PP P+MI I I +L + LF GN ++ +I +Y K K
Sbjct: 54 GRDSLCPPTGSPSMITAITIMALYSIVCVVGLF-GNFLVMYVIVRYTKMK 102
>AY309006-1|AAQ77390.1| 403|Homo sapiens mu opioid receptor splice
variant hMOR-1B3 protein.
Length = 403
Score = 29.9 bits (64), Expect = 10.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 145 GKETKLPPHQEPNMIVDIVIPSL----LIAALFIGNAFIVLIIYKYRKRK 282
G+++ PP P+MI I I +L + LF GN ++ +I +Y K K
Sbjct: 54 GRDSLCPPTGSPSMITAITIMALYSIVCVVGLF-GNFLVMYVIVRYTKMK 102
>AY309005-1|AAQ77389.1| 397|Homo sapiens mu opioid receptor splice
variant hMOR-1B2 protein.
Length = 397
Score = 29.9 bits (64), Expect = 10.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 145 GKETKLPPHQEPNMIVDIVIPSL----LIAALFIGNAFIVLIIYKYRKRK 282
G+++ PP P+MI I I +L + LF GN ++ +I +Y K K
Sbjct: 54 GRDSLCPPTGSPSMITAITIMALYSIVCVVGLF-GNFLVMYVIVRYTKMK 102
>AY309001-1|AAQ77385.1| 392|Homo sapiens mu opioid receptor splice
variant hMOR-1A protein.
Length = 392
Score = 29.9 bits (64), Expect = 10.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 145 GKETKLPPHQEPNMIVDIVIPSL----LIAALFIGNAFIVLIIYKYRKRK 282
G+++ PP P+MI I I +L + LF GN ++ +I +Y K K
Sbjct: 54 GRDSLCPPTGSPSMITAITIMALYSIVCVVGLF-GNFLVMYVIVRYTKMK 102
>AY225404-1|AAP44727.1| 406|Homo sapiens Mu opioid receptor isoform
MOR-1B1 protein.
Length = 406
Score = 29.9 bits (64), Expect = 10.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 145 GKETKLPPHQEPNMIVDIVIPSL----LIAALFIGNAFIVLIIYKYRKRK 282
G+++ PP P+MI I I +L + LF GN ++ +I +Y K K
Sbjct: 54 GRDSLCPPTGSPSMITAITIMALYSIVCVVGLF-GNFLVMYVIVRYTKMK 102
>AY036623-1|AAK74190.1| 418|Homo sapiens mu opioid receptor variant
MOR-1C protein.
Length = 418
Score = 29.9 bits (64), Expect = 10.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 145 GKETKLPPHQEPNMIVDIVIPSL----LIAALFIGNAFIVLIIYKYRKRK 282
G+++ PP P+MI I I +L + LF GN ++ +I +Y K K
Sbjct: 54 GRDSLCPPTGSPSMITAITIMALYSIVCVVGLF-GNFLVMYVIVRYTKMK 102
>AY036622-1|AAK74189.1| 446|Homo sapiens mu opioid receptor variant
MOR-1R protein.
Length = 446
Score = 29.9 bits (64), Expect = 10.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 145 GKETKLPPHQEPNMIVDIVIPSL----LIAALFIGNAFIVLIIYKYRKRK 282
G+++ PP P+MI I I +L + LF GN ++ +I +Y K K
Sbjct: 54 GRDSLCPPTGSPSMITAITIMALYSIVCVVGLF-GNFLVMYVIVRYTKMK 102
>AL136444-2|CAI20337.1| 462|Homo sapiens opioid receptor, mu 1
protein.
Length = 462
Score = 29.9 bits (64), Expect = 10.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 145 GKETKLPPHQEPNMIVDIVIPSL----LIAALFIGNAFIVLIIYKYRKRK 282
G+++ PP P+MI I I +L + LF GN ++ +I +Y K K
Sbjct: 116 GRDSLCPPTGSPSMITAITIMALYSIVCVVGLF-GNFLVMYVIVRYTKMK 164
>AL136444-1|CAC15482.1| 454|Homo sapiens opioid receptor, mu 1
protein.
Length = 454
Score = 29.9 bits (64), Expect = 10.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 145 GKETKLPPHQEPNMIVDIVIPSL----LIAALFIGNAFIVLIIYKYRKRK 282
G+++ PP P+MI I I +L + LF GN ++ +I +Y K K
Sbjct: 116 GRDSLCPPTGSPSMITAITIMALYSIVCVVGLF-GNFLVMYVIVRYTKMK 164
>AL132774-1|CAI20458.1| 462|Homo sapiens opioid receptor, mu 1
protein.
Length = 462
Score = 29.9 bits (64), Expect = 10.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 145 GKETKLPPHQEPNMIVDIVIPSL----LIAALFIGNAFIVLIIYKYRKRK 282
G+++ PP P+MI I I +L + LF GN ++ +I +Y K K
Sbjct: 116 GRDSLCPPTGSPSMITAITIMALYSIVCVVGLF-GNFLVMYVIVRYTKMK 164
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,291,714
Number of Sequences: 237096
Number of extensions: 2012152
Number of successful extensions: 4611
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4592
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -