Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17l12r
         (882 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    25   1.2  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    24   1.6  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -2

Query: 293 KSFQSYS*IR*NIIVFRYFNFKLVYCKVHALSLSHVCLSSVG-YKFCK 153
           K+F S S I  N  +F YFN  LV  +   + L  V  S  G Y+F K
Sbjct: 9   KNFPSTSFILINYFIFLYFN-SLVRFRRFTIELDKVLESPRGKYEFSK 55


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
 Frame = -1

Query: 798 N*EKKINRLNFIFSV---FFCETFGLKNNLKSNEINCLWDKYKMII 670
           N E   N++  I +    FFCE   +K    S   NC W     I+
Sbjct: 117 NIESTSNKMTVILTPPGRFFCEVRPIKRVKDSTNCNCGWKNPSRIV 162


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,811
Number of Sequences: 438
Number of extensions: 4523
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)