Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17l09r
(719 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109305-1|AAI09306.1| 840|Homo sapiens ATPase, H+ transporting... 32 1.8
BC109304-1|AAI09305.1| 840|Homo sapiens ATPase, H+ transporting... 32 1.8
AF245517-1|AAG11415.1| 840|Homo sapiens vacuolar proton pump 11... 32 1.8
AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembr... 32 2.4
AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembr... 32 2.4
AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembr... 32 2.4
AL122064-1|CAB59243.1| 294|Homo sapiens hypothetical protein pr... 32 2.4
AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein. 32 2.4
AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isof... 32 2.4
AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isof... 32 2.4
AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein. 32 2.4
AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein. 32 2.4
AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein. 32 2.4
BX537918-1|CAD97901.1| 1441|Homo sapiens hypothetical protein pr... 31 4.1
AY916667-1|AAX12481.1| 1497|Homo sapiens CCP module-containing p... 31 4.1
AY243503-1|AAQ89957.1| 3574|Homo sapiens selectin-like protein p... 31 4.1
AL592463-2|CAH73558.1| 3548|Homo sapiens sushi, von Willebrand f... 31 4.1
AL354982-2|CAH74139.1| 3548|Homo sapiens sushi, von Willebrand f... 31 4.1
AL158158-6|CAI14071.1| 1497|Homo sapiens sushi, von Willebrand f... 31 4.1
AL158158-3|CAI14068.1| 3548|Homo sapiens sushi, von Willebrand f... 31 4.1
AJ619977-1|CAF04067.1| 3574|Homo sapiens SEL-OB protein protein. 31 4.1
AK075235-1|BAC11489.1| 1497|Homo sapiens protein ( Homo sapiens ... 31 5.5
>BC109305-1|AAI09306.1| 840|Homo sapiens ATPase, H+ transporting,
lysosomal V0 subunit a4 protein.
Length = 840
Score = 32.3 bits (70), Expect = 1.8
Identities = 16/61 (26%), Positives = 35/61 (57%)
Frame = -1
Query: 311 LLSTIQILCMIVM*MFQKCLFRKLLLKVDDYVPTPSVLILCLTFG*I*FLKYYKYMCVCI 132
+L +Q++ +++ +F FR+ L + ++P + ILCL FG + F+ +K+ C +
Sbjct: 546 ILGIVQMVFGVILSLFNHIYFRRTLNIILQFIP-EMIFILCL-FGYLVFMIIFKWCCFDV 603
Query: 131 Y 129
+
Sbjct: 604 H 604
>BC109304-1|AAI09305.1| 840|Homo sapiens ATPase, H+ transporting,
lysosomal V0 subunit a4 protein.
Length = 840
Score = 32.3 bits (70), Expect = 1.8
Identities = 16/61 (26%), Positives = 35/61 (57%)
Frame = -1
Query: 311 LLSTIQILCMIVM*MFQKCLFRKLLLKVDDYVPTPSVLILCLTFG*I*FLKYYKYMCVCI 132
+L +Q++ +++ +F FR+ L + ++P + ILCL FG + F+ +K+ C +
Sbjct: 546 ILGIVQMVFGVILSLFNHIYFRRTLNIILQFIP-EMIFILCL-FGYLVFMIIFKWCCFDV 603
Query: 131 Y 129
+
Sbjct: 604 H 604
>AF245517-1|AAG11415.1| 840|Homo sapiens vacuolar proton pump 116
kDa accessory subunit protein.
Length = 840
Score = 32.3 bits (70), Expect = 1.8
Identities = 16/61 (26%), Positives = 35/61 (57%)
Frame = -1
Query: 311 LLSTIQILCMIVM*MFQKCLFRKLLLKVDDYVPTPSVLILCLTFG*I*FLKYYKYMCVCI 132
+L +Q++ +++ +F FR+ L + ++P + ILCL FG + F+ +K+ C +
Sbjct: 546 ILGIVQMVFGVILSLFNHIYFRRTLNIILQFIP-EMIFILCL-FGYLVFMIIFKWCCFDV 603
Query: 131 Y 129
+
Sbjct: 604 H 604
>AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 962
Score = 31.9 bits (69), Expect = 2.4
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 323 PPRGVGGSLPGSTPR-NVCAHPLRADVTLHYRCTSC-ASPVFNTIASR 460
PP L G +PR + CA PLR DV RC S A P + A R
Sbjct: 828 PPEPAPALLGGPSPRPHECASPLRLDVPPEGRCASAPARPALSAPAPR 875
>AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 930
Score = 31.9 bits (69), Expect = 2.4
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 323 PPRGVGGSLPGSTPR-NVCAHPLRADVTLHYRCTSC-ASPVFNTIASR 460
PP L G +PR + CA PLR DV RC S A P + A R
Sbjct: 796 PPEPAPALLGGPSPRPHECASPLRLDVPPEGRCASAPARPALSAPAPR 843
>AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 922
Score = 31.9 bits (69), Expect = 2.4
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 323 PPRGVGGSLPGSTPR-NVCAHPLRADVTLHYRCTSC-ASPVFNTIASR 460
PP L G +PR + CA PLR DV RC S A P + A R
Sbjct: 788 PPEPAPALLGGPSPRPHECASPLRLDVPPEGRCASAPARPALSAPAPR 835
>AL122064-1|CAB59243.1| 294|Homo sapiens hypothetical protein
protein.
Length = 294
Score = 31.9 bits (69), Expect = 2.4
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 323 PPRGVGGSLPGSTPR-NVCAHPLRADVTLHYRCTSC-ASPVFNTIASR 460
PP L G +PR + CA PLR DV RC S A P + A R
Sbjct: 160 PPEPAPALLGGPSPRPHECASPLRLDVPPEGRCASAPARPALSAPAPR 207
>AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein.
Length = 962
Score = 31.9 bits (69), Expect = 2.4
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 323 PPRGVGGSLPGSTPR-NVCAHPLRADVTLHYRCTSC-ASPVFNTIASR 460
PP L G +PR + CA PLR DV RC S A P + A R
Sbjct: 828 PPEPAPALLGGPSPRPHECASPLRLDVPPEGRCASAPARPALSAPAPR 875
>AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isoform
2 protein.
Length = 922
Score = 31.9 bits (69), Expect = 2.4
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 323 PPRGVGGSLPGSTPR-NVCAHPLRADVTLHYRCTSC-ASPVFNTIASR 460
PP L G +PR + CA PLR DV RC S A P + A R
Sbjct: 788 PPEPAPALLGGPSPRPHECASPLRLDVPPEGRCASAPARPALSAPAPR 835
>AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isoform
1 protein.
Length = 930
Score = 31.9 bits (69), Expect = 2.4
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 323 PPRGVGGSLPGSTPR-NVCAHPLRADVTLHYRCTSC-ASPVFNTIASR 460
PP L G +PR + CA PLR DV RC S A P + A R
Sbjct: 796 PPEPAPALLGGPSPRPHECASPLRLDVPPEGRCASAPARPALSAPAPR 843
>AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein.
Length = 446
Score = 31.9 bits (69), Expect = 2.4
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 323 PPRGVGGSLPGSTPR-NVCAHPLRADVTLHYRCTSC-ASPVFNTIASR 460
PP L G +PR + CA PLR DV RC S A P + A R
Sbjct: 312 PPEPAPALLGGPSPRPHECASPLRLDVPPEGRCASAPARPALSAPAPR 359
>AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein.
Length = 935
Score = 31.9 bits (69), Expect = 2.4
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 323 PPRGVGGSLPGSTPR-NVCAHPLRADVTLHYRCTSC-ASPVFNTIASR 460
PP L G +PR + CA PLR DV RC S A P + A R
Sbjct: 801 PPEPAPALLGGPSPRPHECASPLRLDVPPEGRCASAPARPALSAPAPR 848
>AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein.
Length = 930
Score = 31.9 bits (69), Expect = 2.4
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 323 PPRGVGGSLPGSTPR-NVCAHPLRADVTLHYRCTSC-ASPVFNTIASR 460
PP L G +PR + CA PLR DV RC S A P + A R
Sbjct: 796 PPEPAPALLGGPSPRPHECASPLRLDVPPEGRCASAPARPALSAPAPR 843
>BX537918-1|CAD97901.1| 1441|Homo sapiens hypothetical protein
protein.
Length = 1441
Score = 31.1 bits (67), Expect = 4.1
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +2
Query: 308 IACGSPPRGVGGSLPGSTPRNVCAHPLRADVTLHYRCTSCASPVFNTIASRRDAPHTTLY 487
++CG PP+ G L +T R + +R Y+ S SPVF A+R + L
Sbjct: 72 VSCGEPPKVENGFLEHTTGR-IFESEVRYQCNPGYK--SVGSPVFVCQANRHWHSESPLM 128
Query: 488 YIALDC 505
+ LDC
Sbjct: 129 CVPLDC 134
>AY916667-1|AAX12481.1| 1497|Homo sapiens CCP module-containing
protein protein.
Length = 1497
Score = 31.1 bits (67), Expect = 4.1
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +2
Query: 308 IACGSPPRGVGGSLPGSTPRNVCAHPLRADVTLHYRCTSCASPVFNTIASRRDAPHTTLY 487
++CG PP+ G L +T R + +R Y+ S SPVF A+R + L
Sbjct: 128 VSCGEPPKVENGFLEHTTGR-IFESEVRYQCNPGYK--SVGSPVFVCQANRHWHSESPLM 184
Query: 488 YIALDC 505
+ LDC
Sbjct: 185 CVPLDC 190
>AY243503-1|AAQ89957.1| 3574|Homo sapiens selectin-like protein
protein.
Length = 3574
Score = 31.1 bits (67), Expect = 4.1
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +2
Query: 308 IACGSPPRGVGGSLPGSTPRNVCAHPLRADVTLHYRCTSCASPVFNTIASRRDAPHTTLY 487
++CG PP+ G L +T R + +R Y+ S SPVF A+R + L
Sbjct: 2205 VSCGEPPKVENGFLEHTTGR-IFESEVRYQCNPGYK--SVGSPVFVCQANRHWHSESPLM 2261
Query: 488 YIALDC 505
+ LDC
Sbjct: 2262 CVPLDC 2267
>AL592463-2|CAH73558.1| 3548|Homo sapiens sushi, von Willebrand factor
type A, EGF and pentraxin domain containing 1 protein.
Length = 3548
Score = 31.1 bits (67), Expect = 4.1
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +2
Query: 308 IACGSPPRGVGGSLPGSTPRNVCAHPLRADVTLHYRCTSCASPVFNTIASRRDAPHTTLY 487
++CG PP+ G L +T R + +R Y+ S SPVF A+R + L
Sbjct: 2179 VSCGEPPKVENGFLEHTTGR-IFESEVRYQCNPGYK--SVGSPVFVCQANRHWHSESPLM 2235
Query: 488 YIALDC 505
+ LDC
Sbjct: 2236 CVPLDC 2241
>AL354982-2|CAH74139.1| 3548|Homo sapiens sushi, von Willebrand factor
type A, EGF and pentraxin domain containing 1 protein.
Length = 3548
Score = 31.1 bits (67), Expect = 4.1
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +2
Query: 308 IACGSPPRGVGGSLPGSTPRNVCAHPLRADVTLHYRCTSCASPVFNTIASRRDAPHTTLY 487
++CG PP+ G L +T R + +R Y+ S SPVF A+R + L
Sbjct: 2179 VSCGEPPKVENGFLEHTTGR-IFESEVRYQCNPGYK--SVGSPVFVCQANRHWHSESPLM 2235
Query: 488 YIALDC 505
+ LDC
Sbjct: 2236 CVPLDC 2241
>AL158158-6|CAI14071.1| 1497|Homo sapiens sushi, von Willebrand
factor type A, EGF and pentraxin domain containing 1
protein.
Length = 1497
Score = 31.1 bits (67), Expect = 4.1
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +2
Query: 308 IACGSPPRGVGGSLPGSTPRNVCAHPLRADVTLHYRCTSCASPVFNTIASRRDAPHTTLY 487
++CG PP+ G L +T R + +R Y+ S SPVF A+R + L
Sbjct: 128 VSCGEPPKVENGFLEHTTGR-IFESEVRYQCNPGYK--SVGSPVFVCQANRHWHSESPLM 184
Query: 488 YIALDC 505
+ LDC
Sbjct: 185 CVPLDC 190
>AL158158-3|CAI14068.1| 3548|Homo sapiens sushi, von Willebrand factor
type A, EGF and pentraxin domain containing 1 protein.
Length = 3548
Score = 31.1 bits (67), Expect = 4.1
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +2
Query: 308 IACGSPPRGVGGSLPGSTPRNVCAHPLRADVTLHYRCTSCASPVFNTIASRRDAPHTTLY 487
++CG PP+ G L +T R + +R Y+ S SPVF A+R + L
Sbjct: 2179 VSCGEPPKVENGFLEHTTGR-IFESEVRYQCNPGYK--SVGSPVFVCQANRHWHSESPLM 2235
Query: 488 YIALDC 505
+ LDC
Sbjct: 2236 CVPLDC 2241
>AJ619977-1|CAF04067.1| 3574|Homo sapiens SEL-OB protein protein.
Length = 3574
Score = 31.1 bits (67), Expect = 4.1
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +2
Query: 308 IACGSPPRGVGGSLPGSTPRNVCAHPLRADVTLHYRCTSCASPVFNTIASRRDAPHTTLY 487
++CG PP+ G L +T R + +R Y+ S SPVF A+R + L
Sbjct: 2205 VSCGEPPKVENGFLEHTTGR-IFESEVRYQCNPGYK--SVGSPVFVCQANRHWHSESPLM 2261
Query: 488 YIALDC 505
+ LDC
Sbjct: 2262 CVPLDC 2267
>AK075235-1|BAC11489.1| 1497|Homo sapiens protein ( Homo sapiens
cDNA FLJ90754 fis, clone PLACE4000354, weakly similar to
COMPLEMENT RECEPTOR TYPE 1 PRECURSOR. ).
Length = 1497
Score = 30.7 bits (66), Expect = 5.5
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +2
Query: 308 IACGSPPRGVGGSLPGSTPRNVCAHPLRADVTLHYRCTSCASPVFNTIASRRDAPHTTLY 487
++CG PP+ G L +T R + +R Y+ SPVF A+R + L
Sbjct: 128 VSCGEPPKVENGFLEHTTGR-IFESEVRYQCNPGYK--PVGSPVFVCHANRHWHSESPLM 184
Query: 488 YIALDC 505
++ LDC
Sbjct: 185 WVPLDC 190
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,204,858
Number of Sequences: 237096
Number of extensions: 2153457
Number of successful extensions: 8578
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 8325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8567
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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