Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17l07f
(801 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP4H10.16c |||phosphatase activator |Schizosaccharomyces pombe... 28 1.8
SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces pomb... 27 2.3
SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 3.1
SPAC15A10.10 |mde6||Muskelin homolog|Schizosaccharomyces pombe|c... 27 4.1
SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces po... 26 5.4
SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|c... 26 5.4
SPBC1778.10c |ppk21|SPBC4C3.11|serine/threonine protein kinase P... 26 7.2
SPCC1020.08 |||wybutosine biosynthesis protein Tyw1|Schizosaccha... 26 7.2
SPBP4H10.03 |oxa102|oxa1, oxa1-2, oxa1sp2|mitochondrial inner me... 25 9.5
SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosa... 25 9.5
>SPBP4H10.16c |||phosphatase activator |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 295
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 354 PTAQVQTHPRFHKLLVFQSKQARTC 280
P + + P +HKLL+F K AR C
Sbjct: 231 PVSDPEYFPVYHKLLLFWQKPARKC 255
>SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 990
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -2
Query: 647 GQRCVVDVLTQISASIFGAHSPGGVFRACIIEFLTYSFNIKLSMDPDCSVCCTDMIS 477
G+ ++DV + F S F+A +I FLT+S ++ L + C MI+
Sbjct: 679 GESPIIDVEQSTQETTFWQQSCIAEFQAKLISFLTHSESMALQYSDVVGLICKIMIA 735
>SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 713 RSRLAAHHRALHRTD-PRGRSSDPPRSHFA 799
R RLAAH + LH + PRG ++ RS ++
Sbjct: 225 RRRLAAHRKELHEANRPRGGLNNSSRSAYS 254
>SPAC15A10.10 |mde6||Muskelin homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 716
Score = 26.6 bits (56), Expect = 4.1
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +1
Query: 649 WIIAVHCLSTSRTLMCTRRNKPL 717
W +A+H + ++ L CT +N+ L
Sbjct: 147 WYVALHGIDSASALSCTEKNRAL 169
>SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 594
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/36 (27%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = -1
Query: 636 CSRCTHTNICQHLWSSQPWW---SLQGLHH*IPYIF 538
C RC + + LW+S+ +W +G ++ + Y+F
Sbjct: 540 CLRCVYDDKMDSLWNSRSFWVSKVFKGTYYRLSYLF 575
>SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1274
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 360 VSPTAQVQTHPRFHKLLVFQ-SKQARTCVYFLFLVYLKVSRLPN 232
V PTA H F K+L + S ++R CV+ + + +K S + N
Sbjct: 661 VDPTALAPGH-HFGKVLAYDASNESRRCVFEIPVTVMKPSSISN 703
>SPBC1778.10c |ppk21|SPBC4C3.11|serine/threonine protein kinase
Ppk21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 162 DFLFKPIIMVTGFGPFANHPVNASWE--AVKLLDKQEIENKHRCELVLIE 305
D++F II F SW+ A+K+LDK+ I +++ + V IE
Sbjct: 53 DYVFGDIIGDGSFSKVRRATDKKSWKEYAIKVLDKKYIVKENKVKYVNIE 102
>SPCC1020.08 |||wybutosine biosynthesis protein
Tyw1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 688
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +3
Query: 261 QEIENKHRCELVLIEIPVTYENVDEFVPALWETHTPKLMI 380
+E C L L+ P+ Y ++EFV L E ++
Sbjct: 413 EEASRVRHCALSLVGEPIFYPYINEFVSMLHEREISSFLV 452
>SPBP4H10.03 |oxa102|oxa1, oxa1-2, oxa1sp2|mitochondrial inner
membrane translocase Oxa102|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 409
Score = 25.4 bits (53), Expect = 9.5
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 603 HLWSSQPWWS 574
H+WS PWW+
Sbjct: 108 HIWSGLPWWA 117
>SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 639
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = +2
Query: 707 TNRSRLAAHHRALHRTDPRGR--SSDPPRSHFA 799
TN SR HH + HR GR S+ P S A
Sbjct: 22 TNHSRRHRHHHSRHRESKHGRHDRSERPSSREA 54
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,289,221
Number of Sequences: 5004
Number of extensions: 70985
Number of successful extensions: 185
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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