Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17l07f
(801 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83731-1|CAB06022.2| 208|Caenorhabditis elegans Hypothetical pr... 89 3e-18
Z83731-3|CAB06020.2| 248|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z81506-3|CAB04130.1| 197|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z83731-6|CAN86605.2| 208|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z83731-5|CAN86604.2| 223|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z82070-9|CAB04916.4| 222|Caenorhabditis elegans Hypothetical pr... 39 0.005
AL132872-4|CAJ76957.2| 222|Caenorhabditis elegans Hypothetical ... 39 0.005
Z81506-8|CAB04125.2| 225|Caenorhabditis elegans Hypothetical pr... 37 0.015
AF002198-3|AAF99933.1| 208|Caenorhabditis elegans Hypothetical ... 34 0.10
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 32 0.55
Z68751-7|CAA92977.2| 319|Caenorhabditis elegans Hypothetical pr... 32 0.55
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr... 28 6.8
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 28 6.8
>Z83731-1|CAB06022.2| 208|Caenorhabditis elegans Hypothetical
protein M04C9.3 protein.
Length = 208
Score = 89.4 bits (212), Expect = 3e-18
Identities = 63/203 (31%), Positives = 96/203 (47%), Gaps = 8/203 (3%)
Frame = +3
Query: 174 KPIIMVTGFGPFAN-HPVNASWEAVKLLDKQEIENKHRCELVLIEIPVTYENVDEFVPAL 350
K ++VTGFGPF N S + L K I +L L +I V YE+V + VP L
Sbjct: 9 KKKVVVTGFGPFRGFEEENPSSIIIDELTKNGISG---VDLELHKITVAYEDVSKKVPEL 65
Query: 351 WETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCPANH--VCTADGAVRIHTK 524
W H P L+IH+G + + E QA GY D PA++ C+++ + +
Sbjct: 66 WNEHKPDLVIHLGAHPVEKTIKFEQQAFSNGYCSNDVNGCTPADNKTSCSSEHETLV-SC 124
Query: 525 LNVERICKEFNDASPEDSTR-----AVSSKDAGRYLCEYIYYTSLSVDNSRTLFVHVPDT 689
+N + + + + D + S+D GRYLC + Y+ SL D S++LF+HVP
Sbjct: 125 INCDFLVTKVTEKCALDGQKYSGLCVKKSEDPGRYLCGFSYFLSLHEDCSKSLFIHVP-- 182
Query: 690 NVYSSEQTARGLQRIIELCIEQI 758
+ E T + +I I I
Sbjct: 183 -AFKEECTKEAVTEVIRETINTI 204
>Z83731-3|CAB06020.2| 248|Caenorhabditis elegans Hypothetical
protein M04C9.2 protein.
Length = 248
Score = 59.7 bits (138), Expect = 2e-09
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Frame = +3
Query: 159 LDFLFKPIIMVTGF-GPFANHPVNASWEAVKLLDKQEIENKHRCELVLIEIPVTYENVDE 335
+D + +++T F G F + N S + L K+EIEN + + PV+YE V E
Sbjct: 39 VDHQYTRDVVITAFDGQFEDLDYNPSSVVIDELLKEEIEN---VRFTVHKFPVSYETVAE 95
Query: 336 FVPALWETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCPANHVCT------A 497
VP L E + P ++H+ S+ N + E +A GY + D P + + A
Sbjct: 96 KVPELREKY-PDEVLHLAAHSVKNRVLFEEKAFSDGYVKKDVNGFVPEGNTISSENYEDA 154
Query: 498 DGAVRIHTKLNVERICKEFNDASPEDSTR-----AVSSKDAGRYLCEYIYYTSLSVDNSR 662
D + ++ + + ++ + D + S++ GR + Y+YY SL
Sbjct: 155 DDRKSLKPFIDFDFLIEDVTEKCGLDGEKFGGLTVGKSQEPGRSVGGYLYYLSLRERPIN 214
Query: 663 TLFVHVPDTNVYSSEQTARGLQRIIELCIEQI 758
TL +H+P + E T + +I I+ I
Sbjct: 215 TLLIHIPP---FEGECTKEAVTNVIREAIKFI 243
>Z81506-3|CAB04130.1| 197|Caenorhabditis elegans Hypothetical
protein F16H6.4 protein.
Length = 197
Score = 50.0 bits (114), Expect = 2e-06
Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Frame = +3
Query: 315 TYENVDEFVPALWETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCPAN-HVC 491
+YE VDE +P + + IH+G S N L + A+ GY D K P V
Sbjct: 67 SYEKVDE-IPEKIDAERIRYAIHLGSHSQKNVLQIFQSAYSDGYTEEDKNGKVPVGGKVK 125
Query: 492 TADGAVRIHTKLNVERIC---KEFNDASPED--STRAVSSKDAGRYLCEYIYYTSLSVDN 656
A+ TK+N E + E+ D++ E R + A R L YIY++ L
Sbjct: 126 CAETETGFRTKINCENVVTAVNEYMDSNREKFGELRIETLNKAERNLDGYIYFSFLKQKP 185
Query: 657 SRTLFVHVP 683
R LF+ +P
Sbjct: 186 CRNLFIRIP 194
>Z83731-6|CAN86605.2| 208|Caenorhabditis elegans Hypothetical
protein M04C9.1b protein.
Length = 208
Score = 46.4 bits (105), Expect = 2e-05
Identities = 40/196 (20%), Positives = 85/196 (43%), Gaps = 6/196 (3%)
Frame = +3
Query: 183 IMVTGFGPFANHPVNASWEAVKLLDKQEIENKHRCELVLIEIPVTYENVDEFVPALWETH 362
I + GF N N S + ++ + ++ +K + LI+ P++Y+ + + + L+E
Sbjct: 18 IAIVGFETSEN-ATNPSNDVMEQICSEQYSDKM---IFLIKFPLSYDPLKQKIDELFEC- 72
Query: 363 TPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCPANHVCTADGAVR-IHTKLNVER 539
+ H + N + +E +A + GY + D P + + + + T ++
Sbjct: 73 PGVVAFHFETHLVKNTIYVEKKAFQSGYHQKDEKGYLPEGNKVSCESVDNTLETIIDCMD 132
Query: 540 ICKEFNDASPEDSTR-----AVSSKDAGRYLCEYIYYTSLSVDNSRTLFVHVPDTNVYSS 704
+ K+ + D + S+D GR + Y YY SL ++F+HVP +
Sbjct: 133 VVKKVTEKCGLDGVKFGGLKVEVSEDPGRSIGAYSYYLSLQKSTKNSIFIHVPP---FGG 189
Query: 705 EQTARGLQRIIELCIE 752
E T + +++ I+
Sbjct: 190 ECTKEAVVNVVKEIID 205
>Z83731-5|CAN86604.2| 223|Caenorhabditis elegans Hypothetical
protein M04C9.1a protein.
Length = 223
Score = 46.4 bits (105), Expect = 2e-05
Identities = 40/196 (20%), Positives = 85/196 (43%), Gaps = 6/196 (3%)
Frame = +3
Query: 183 IMVTGFGPFANHPVNASWEAVKLLDKQEIENKHRCELVLIEIPVTYENVDEFVPALWETH 362
I + GF N N S + ++ + ++ +K + LI+ P++Y+ + + + L+E
Sbjct: 33 IAIVGFETSEN-ATNPSNDVMEQICSEQYSDKM---IFLIKFPLSYDPLKQKIDELFEC- 87
Query: 363 TPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCPANHVCTADGAVR-IHTKLNVER 539
+ H + N + +E +A + GY + D P + + + + T ++
Sbjct: 88 PGVVAFHFETHLVKNTIYVEKKAFQSGYHQKDEKGYLPEGNKVSCESVDNTLETIIDCMD 147
Query: 540 ICKEFNDASPEDSTR-----AVSSKDAGRYLCEYIYYTSLSVDNSRTLFVHVPDTNVYSS 704
+ K+ + D + S+D GR + Y YY SL ++F+HVP +
Sbjct: 148 VVKKVTEKCGLDGVKFGGLKVEVSEDPGRSIGAYSYYLSLQKSTKNSIFIHVPP---FGG 204
Query: 705 EQTARGLQRIIELCIE 752
E T + +++ I+
Sbjct: 205 ECTKEAVVNVVKEIID 220
>Z82070-9|CAB04916.4| 222|Caenorhabditis elegans Hypothetical
protein W04E12.7 protein.
Length = 222
Score = 38.7 bits (86), Expect = 0.005
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 6/129 (4%)
Frame = +3
Query: 315 TYENVDEFVPALWETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCP-ANHVC 491
+YE DE + A T IH+ S N L + A+ GY + D K P V
Sbjct: 71 SYEKADE-IAAKMATEEIHFTIHLSSHSQKNVLQIFQSAYSDGYTQQDKDGKVPEGGKVK 129
Query: 492 TADGAVRIHTKLNVERICKEFNDASPED-----STRAVSSKDAGRYLCEYIYYTSLSVDN 656
++ + + E + KE N+ D + S A R L Y +++ +
Sbjct: 130 CSETETGARSNVKCEEVAKEVNERMDSDKDKFGDLKVESLGKAERNLDGYTFFSFMKQKP 189
Query: 657 SRTLFVHVP 683
R LF+ VP
Sbjct: 190 RRNLFIGVP 198
>AL132872-4|CAJ76957.2| 222|Caenorhabditis elegans Hypothetical
protein W04E12.7 protein.
Length = 222
Score = 38.7 bits (86), Expect = 0.005
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 6/129 (4%)
Frame = +3
Query: 315 TYENVDEFVPALWETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCP-ANHVC 491
+YE DE + A T IH+ S N L + A+ GY + D K P V
Sbjct: 71 SYEKADE-IAAKMATEEIHFTIHLSSHSQKNVLQIFQSAYSDGYTQQDKDGKVPEGGKVK 129
Query: 492 TADGAVRIHTKLNVERICKEFNDASPED-----STRAVSSKDAGRYLCEYIYYTSLSVDN 656
++ + + E + KE N+ D + S A R L Y +++ +
Sbjct: 130 CSETETGARSNVKCEEVAKEVNERMDSDKDKFGDLKVESLGKAERNLDGYTFFSFMKQKP 189
Query: 657 SRTLFVHVP 683
R LF+ VP
Sbjct: 190 RRNLFIGVP 198
>Z81506-8|CAB04125.2| 225|Caenorhabditis elegans Hypothetical
protein F16H6.7 protein.
Length = 225
Score = 37.1 bits (82), Expect = 0.015
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 9/132 (6%)
Frame = +3
Query: 315 TYENVDEFVPALWETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCP-ANHVC 491
+Y VDE + A T IH+ S N + + A+ GY D K P V
Sbjct: 71 SYGKVDE-IAAKMVTEEIHFTIHLCSHSQKNVIEIFQSAYSNGYTEKDKKGKIPEGGKVK 129
Query: 492 TADGAVRIHTKLNVERICKEFNDA--SPEDS------TRAVSSKDAGRYLCEYIYYTSLS 647
A +K+N E + KE N+ S +D + VS + L Y Y++ +
Sbjct: 130 CAGTETGARSKVNCEEVAKEVNERIDSAKDKFGEFWESGEVSPRVGVLNLDGYTYFSFMK 189
Query: 648 VDNSRTLFVHVP 683
+ R LF+ VP
Sbjct: 190 QKSRRNLFIRVP 201
>AF002198-3|AAF99933.1| 208|Caenorhabditis elegans Hypothetical
protein F35F10.6 protein.
Length = 208
Score = 34.3 bits (75), Expect = 0.10
Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Frame = +3
Query: 297 LIEIPVTYENVDEFVPALWETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCP 476
L ++ +Y NVD+ V + + + IH+ S+ N + + A GY + D P
Sbjct: 49 LFKMEESYINVDQVVQEIANIQS-RYAIHLSSHSLKNTIQIVRTAFPNGYTQNDKNGNVP 107
Query: 477 ANHVCTADGAVRI-HTKLNVERICKEFNDASPEDSTR-----AVSSKDAGRYLCEYIYYT 638
+ DG + T ++ E++ K+ + ED + +++ R L Y Y++
Sbjct: 108 EGNKVKFDGDETVMKTTVDCEQLVKDIKEFMEEDRQKYGELEIQIIEESERNLDGYAYFS 167
Query: 639 SLSVDNSRTLFVHVP 683
L T+ + +P
Sbjct: 168 FLKFVPCGTIHLRIP 182
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical protein
W05B2.2 protein.
Length = 1278
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 465 DKCPANHVCTADGAVRIHTKLNVERIC 545
D CP H CTA G+V I L ++ IC
Sbjct: 965 DDCPEFHKCTAQGSVSICCGLEIQDIC 991
>Z68751-7|CAA92977.2| 319|Caenorhabditis elegans Hypothetical
protein T05E11.6 protein.
Length = 319
Score = 31.9 bits (69), Expect = 0.55
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 405 NELTLEVQAHKKGYQRLDYFDKCPANHVCTADGAVRIHTKLNVERI 542
N LT EV+A DY D CPA + G + H +V+R+
Sbjct: 247 NFLTKEVKALNSSANMQDYIDSCPARKCLSNTGVRKDHYPKDVKRV 292
>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical
protein C01B9.1b protein.
Length = 1671
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3
Query: 291 LVLIEIPVTYENVDEFVPALWETHTPKLMIHVGV 392
++ IEIP++Y ++ W++ P+++ HVG+
Sbjct: 77 ILAIEIPISYISIQFVNRECWKSLNPEVVSHVGM 110
>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical
protein C01B9.1a protein.
Length = 1601
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3
Query: 291 LVLIEIPVTYENVDEFVPALWETHTPKLMIHVGV 392
++ IEIP++Y ++ W++ P+++ HVG+
Sbjct: 7 ILAIEIPISYISIQFVNRECWKSLNPEVVSHVGM 40
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 9/63 (14%)
Frame = +3
Query: 465 DKCPANHVCTADGAVRIHT--KLNVERIC----KEFNDA---SPEDSTRAVSSKDAGRYL 617
+ CP N+ CT + + HT + + +C K F D SP A K G YL
Sbjct: 886 NNCPINYDCTLNALTQEHTCCGSDGQGVCPSGEKAFMDPRTNSPRQCAMAADGKCPGGYL 945
Query: 618 CEY 626
C +
Sbjct: 946 CRF 948
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,230,375
Number of Sequences: 27780
Number of extensions: 401232
Number of successful extensions: 1052
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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