Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17l05f
         (764 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089215-1|AAL89953.1|  377|Drosophila melanogaster AT01633p pro...    30   4.0  
AE014297-1911|AAF55107.2|  885|Drosophila melanogaster CG7292-PA...    29   9.2  

>AY089215-1|AAL89953.1|  377|Drosophila melanogaster AT01633p
           protein.
          Length = 377

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -3

Query: 213 ERNQCINHAVDVCVDICC*TKAFPVTSDGIPGLRMELALGNKIMALCC 70
           + ++CI HA  V +D CC  +  P++ + +   R  L      +  CC
Sbjct: 264 QASECIFHA-QVVIDECCHAEKSPISPENLESFRRNLECFMDALRNCC 310


>AE014297-1911|AAF55107.2|  885|Drosophila melanogaster CG7292-PA
           protein.
          Length = 885

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +1

Query: 538 DEIHLQELYLTDVGVIRVSLSGNILYDWLVTPLANVFVRLFD 663
           D++H+  L LTD   +++    ++  +WL   L+   V +FD
Sbjct: 330 DDMHILNLVLTDPKKLKILHGADLDIEWLQRDLSLYIVNMFD 371


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,108,383
Number of Sequences: 53049
Number of extensions: 743885
Number of successful extensions: 1927
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1927
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)