Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17k21f
(740 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101847-1|AAI01848.1| 196|Homo sapiens peptidoglycan recogniti... 73 1e-12
BC101845-1|AAI01846.1| 196|Homo sapiens peptidoglycan recogniti... 73 1e-12
BC096157-1|AAH96157.1| 196|Homo sapiens peptidoglycan recogniti... 73 1e-12
BC096156-1|AAH96156.1| 196|Homo sapiens peptidoglycan recogniti... 73 1e-12
BC096155-1|AAH96155.1| 196|Homo sapiens peptidoglycan recogniti... 73 1e-12
BC096154-1|AAH96154.1| 196|Homo sapiens peptidoglycan recogniti... 73 1e-12
AY358936-1|AAQ89295.1| 196|Homo sapiens Granulocyte pep A protein. 73 1e-12
AF242517-1|AAF99598.1| 196|Homo sapiens hypothetical protein SB... 73 1e-12
AF076483-1|AAC31822.1| 196|Homo sapiens peptidoglycan recogniti... 73 1e-12
AC007785-2|AAD38243.1| 196|Homo sapiens peptidoglycan recogniti... 73 1e-12
BC128115-1|AAI28116.1| 341|Homo sapiens peptidoglycan recogniti... 69 1e-11
BC128114-1|AAI28115.1| 341|Homo sapiens peptidoglycan recogniti... 69 1e-11
BC069801-1|AAH69801.1| 341|Homo sapiens peptidoglycan recogniti... 69 1e-11
BC069798-1|AAH69798.1| 341|Homo sapiens peptidoglycan recogniti... 69 1e-11
BC069741-1|AAH69741.1| 341|Homo sapiens peptidoglycan recogniti... 69 1e-11
AY035376-1|AAK72484.1| 341|Homo sapiens peptidoglycan recogniti... 69 1e-11
AL591704-1|CAI19491.1| 341|Homo sapiens peptidoglycan recogniti... 69 1e-11
AL161636-1|CAI19556.1| 341|Homo sapiens peptidoglycan recogniti... 69 1e-11
BC142636-1|AAI42637.1| 373|Homo sapiens PGLYRP4 protein protein. 69 2e-11
BC107158-1|AAI07159.1| 373|Homo sapiens peptidoglycan recogniti... 69 2e-11
BC107157-1|AAI07158.1| 373|Homo sapiens peptidoglycan recogniti... 69 2e-11
AY035377-1|AAK72485.1| 373|Homo sapiens peptidoglycan recogniti... 69 2e-11
AL591704-3|CAI19492.1| 373|Homo sapiens peptidoglycan recogniti... 69 2e-11
AL591704-2|CAI19493.1| 369|Homo sapiens peptidoglycan recogniti... 69 2e-11
AF242518-1|AAF99599.1| 368|Homo sapiens hypothetical protein SB... 69 2e-11
AY358156-1|AAQ88523.1| 576|Homo sapiens AQGV3103 protein. 66 9e-11
AF384856-1|AAL05629.1| 576|Homo sapiens peptidoglycan recogniti... 66 9e-11
AB073610-1|BAD38647.1| 576|Homo sapiens peptidoglycan recogniti... 66 9e-11
AK055882-1|BAB71034.1| 634|Homo sapiens protein ( Homo sapiens ... 66 1e-10
AL442071-4|CAH73671.1| 5938|Homo sapiens microtubule-actin cross... 33 0.81
AL365277-12|CAI16422.1| 5938|Homo sapiens microtubule-actin cros... 33 0.81
AL137853-3|CAI21816.1| 5938|Homo sapiens microtubule-actin cross... 33 0.81
AF325341-2|AAL38997.1| 5314|Homo sapiens macrophin 1 isoform 4 p... 33 0.81
AF317696-1|AAL09459.1| 5938|Homo sapiens macrophin 1 isoform 4 p... 33 0.81
BC037301-1|AAH37301.1| 799|Homo sapiens chromosome X open readi... 31 5.7
AL096763-1|CAI42219.1| 799|Homo sapiens chromosome X open readi... 31 5.7
>BC101847-1|AAI01848.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 72.9 bits (171), Expect = 1e-12
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
+ R W+A + Q + P+R V++ HT C T +C RN+Q Y + L +
Sbjct: 34 VPRNEWKALASECAQHLSL--PLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWC 91
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHT 722
D+ YNF+IG DG VYEGRGW GAH+
Sbjct: 92 DVGYNFLIGEDGLVYEGRGWNFTGAHS 118
>BC101845-1|AAI01846.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 72.9 bits (171), Expect = 1e-12
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
+ R W+A + Q + P+R V++ HT C T +C RN+Q Y + L +
Sbjct: 34 VPRNEWKALASECAQHLSL--PLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWC 91
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHT 722
D+ YNF+IG DG VYEGRGW GAH+
Sbjct: 92 DVGYNFLIGEDGLVYEGRGWNFTGAHS 118
>BC096157-1|AAH96157.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 72.9 bits (171), Expect = 1e-12
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
+ R W+A + Q + P+R V++ HT C T +C RN+Q Y + L +
Sbjct: 34 VPRNEWKALASECAQHLSL--PLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWC 91
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHT 722
D+ YNF+IG DG VYEGRGW GAH+
Sbjct: 92 DVGYNFLIGEDGLVYEGRGWNFTGAHS 118
>BC096156-1|AAH96156.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 72.9 bits (171), Expect = 1e-12
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
+ R W+A + Q + P+R V++ HT C T +C RN+Q Y + L +
Sbjct: 34 VPRNEWKALASECAQHLSL--PLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWC 91
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHT 722
D+ YNF+IG DG VYEGRGW GAH+
Sbjct: 92 DVGYNFLIGEDGLVYEGRGWNFTGAHS 118
>BC096155-1|AAH96155.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 72.9 bits (171), Expect = 1e-12
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
+ R W+A + Q + P+R V++ HT C T +C RN+Q Y + L +
Sbjct: 34 VPRNEWKALASECAQHLSL--PLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWC 91
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHT 722
D+ YNF+IG DG VYEGRGW GAH+
Sbjct: 92 DVGYNFLIGEDGLVYEGRGWNFTGAHS 118
>BC096154-1|AAH96154.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 72.9 bits (171), Expect = 1e-12
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
+ R W+A + Q + P+R V++ HT C T +C RN+Q Y + L +
Sbjct: 34 VPRNEWKALASECAQHLSL--PLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWC 91
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHT 722
D+ YNF+IG DG VYEGRGW GAH+
Sbjct: 92 DVGYNFLIGEDGLVYEGRGWNFTGAHS 118
>AY358936-1|AAQ89295.1| 196|Homo sapiens Granulocyte pep A protein.
Length = 196
Score = 72.9 bits (171), Expect = 1e-12
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
+ R W+A + Q + P+R V++ HT C T +C RN+Q Y + L +
Sbjct: 34 VPRNEWKALASECAQHLSL--PLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWC 91
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHT 722
D+ YNF+IG DG VYEGRGW GAH+
Sbjct: 92 DVGYNFLIGEDGLVYEGRGWNFTGAHS 118
>AF242517-1|AAF99598.1| 196|Homo sapiens hypothetical protein
SBBI68 protein.
Length = 196
Score = 72.9 bits (171), Expect = 1e-12
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
+ R W+A + Q + P+R V++ HT C T +C RN+Q Y + L +
Sbjct: 34 VPRNEWKALASECAQHLSL--PLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWC 91
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHT 722
D+ YNF+IG DG VYEGRGW GAH+
Sbjct: 92 DVGYNFLIGEDGLVYEGRGWNFTGAHS 118
>AF076483-1|AAC31822.1| 196|Homo sapiens peptidoglycan recognition
protein precursor protein.
Length = 196
Score = 72.9 bits (171), Expect = 1e-12
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
+ R W+A + Q + P+R V++ HT C T +C RN+Q Y + L +
Sbjct: 34 VPRNEWKALASECAQHLSL--PLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWC 91
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHT 722
D+ YNF+IG DG VYEGRGW GAH+
Sbjct: 92 DVGYNFLIGEDGLVYEGRGWNFTGAHS 118
>AC007785-2|AAD38243.1| 196|Homo sapiens peptidoglycan recognition
protein precursor protein.
Length = 196
Score = 72.9 bits (171), Expect = 1e-12
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
+ R W+A + Q + P+R V++ HT C T +C RN+Q Y + L +
Sbjct: 34 VPRNEWKALASECAQHLSL--PLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWC 91
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHT 722
D+ YNF+IG DG VYEGRGW GAH+
Sbjct: 92 DVGYNFLIGEDGLVYEGRGWNFTGAHS 118
>BC128115-1|AAI28116.1| 341|Homo sapiens peptidoglycan recognition
protein 3 protein.
Length = 341
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
I R W+AR + + P + VII HT C C +RN+QS+ + ++
Sbjct: 182 IKRSAWEARETHCPKMNL---PAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFC 238
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
DI Y+F++G DG VYEG GW + G+HT+ +N
Sbjct: 239 DIGYHFLVGQDGGVYEGVGWHIQGSHTYGFN 269
Score = 62.9 bits (146), Expect = 1e-09
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Frame = +3
Query: 459 WDISRVLWQARWANNTQRTTAFD--PIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLIN 632
WD ++ + W A P+ +I C C LR LQS+ +
Sbjct: 18 WDTPTIVSRKEWGARPLACRALLTLPVAYIITDQLPGMQCQQQSVCSQMLRGLQSHSVYT 77
Query: 633 LHY-DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
+ + D+ YNF++G+DGRVYEG GW + G HT YN
Sbjct: 78 IGWCDVAYNFLVGDDGRVYEGVGWNIQGLHTQGYN 112
>BC128114-1|AAI28115.1| 341|Homo sapiens peptidoglycan recognition
protein 3 protein.
Length = 341
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
I R W+AR + + P + VII HT C C +RN+QS+ + ++
Sbjct: 182 IKRSAWEARETHCPKMNL---PAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFC 238
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
DI Y+F++G DG VYEG GW + G+HT+ +N
Sbjct: 239 DIGYHFLVGQDGGVYEGVGWHIQGSHTYGFN 269
Score = 62.9 bits (146), Expect = 1e-09
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Frame = +3
Query: 459 WDISRVLWQARWANNTQRTTAFD--PIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLIN 632
WD ++ + W A P+ +I C C LR LQS+ +
Sbjct: 18 WDTPTIVSRKEWGARPLACRALLTLPVAYIITDQLPGMQCQQQSVCSQMLRGLQSHSVYT 77
Query: 633 LHY-DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
+ + D+ YNF++G+DGRVYEG GW + G HT YN
Sbjct: 78 IGWCDVAYNFLVGDDGRVYEGVGWNIQGLHTQGYN 112
>BC069801-1|AAH69801.1| 341|Homo sapiens peptidoglycan recognition
protein 3 protein.
Length = 341
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
I R W+AR + + P + VII HT C C +RN+QS+ + ++
Sbjct: 182 IKRSAWEARETHCPKMNL---PAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFC 238
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
DI Y+F++G DG VYEG GW + G+HT+ +N
Sbjct: 239 DIGYHFLVGQDGGVYEGVGWHIQGSHTYGFN 269
Score = 62.9 bits (146), Expect = 1e-09
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Frame = +3
Query: 459 WDISRVLWQARWANNTQRTTAFD--PIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLIN 632
WD ++ + W A P+ +I C C LR LQS+ +
Sbjct: 18 WDTPTIVSRKEWGARPLACRALLTLPVAYIITDQLPGMQCQQQSVCSQMLRGLQSHSVYT 77
Query: 633 LHY-DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
+ + D+ YNF++G+DGRVYEG GW + G HT YN
Sbjct: 78 IGWCDVAYNFLVGDDGRVYEGVGWNIQGLHTQGYN 112
>BC069798-1|AAH69798.1| 341|Homo sapiens peptidoglycan recognition
protein 3 protein.
Length = 341
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
I R W+AR + + P + VII HT C C +RN+QS+ + ++
Sbjct: 182 IKRSAWEARETHCPKMNL---PAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFC 238
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
DI Y+F++G DG VYEG GW + G+HT+ +N
Sbjct: 239 DIGYHFLVGQDGGVYEGVGWHIQGSHTYGFN 269
Score = 62.9 bits (146), Expect = 1e-09
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Frame = +3
Query: 459 WDISRVLWQARWANNTQRTTAFD--PIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLIN 632
WD ++ + W A P+ +I C C LR LQS+ +
Sbjct: 18 WDTPTIVSRKEWGARPLACRALLTLPVAYIITDQLPGMQCQQQSVCSQMLRGLQSHSVYT 77
Query: 633 LHY-DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
+ + D+ YNF++G+DGRVYEG GW + G HT YN
Sbjct: 78 IGWCDVAYNFLVGDDGRVYEGVGWNIQGLHTQGYN 112
>BC069741-1|AAH69741.1| 341|Homo sapiens peptidoglycan recognition
protein-I-alpha, precursor protein.
Length = 341
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
I R W+AR + + P + VII HT C C +RN+QS+ + ++
Sbjct: 182 IKRSAWEARETHCPKMNL---PAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFC 238
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
DI Y+F++G DG VYEG GW + G+HT+ +N
Sbjct: 239 DIGYHFLVGQDGGVYEGVGWHIQGSHTYGFN 269
Score = 62.9 bits (146), Expect = 1e-09
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Frame = +3
Query: 459 WDISRVLWQARWANNTQRTTAFD--PIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLIN 632
WD ++ + W A P+ +I C C LR LQS+ +
Sbjct: 18 WDTPTIVSRKEWGARPLACRALLTLPVAYIITDQLPGMQCQQQSVCSQMLRGLQSHSVYT 77
Query: 633 LHY-DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
+ + D+ YNF++G+DGRVYEG GW + G HT YN
Sbjct: 78 IGWCDVAYNFLVGDDGRVYEGVGWNIQGLHTQGYN 112
>AY035376-1|AAK72484.1| 341|Homo sapiens peptidoglycan recognition
protein-I-alpha precursor protein.
Length = 341
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
I R W+AR + + P + VII HT C C +RN+QS+ + ++
Sbjct: 182 IKRSAWEARETHCPKMNL---PAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFC 238
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
DI Y+F++G DG VYEG GW + G+HT+ +N
Sbjct: 239 DIGYHFLVGQDGGVYEGVGWHIQGSHTYGFN 269
Score = 62.9 bits (146), Expect = 1e-09
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Frame = +3
Query: 459 WDISRVLWQARWANNTQRTTAFD--PIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLIN 632
WD ++ + W A P+ +I C C LR LQS+ +
Sbjct: 18 WDTPTIVSRKEWGARPLACRALLTLPVAYIITDQLPGMQCQQQSVCSQMLRGLQSHSVYT 77
Query: 633 LHY-DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
+ + D+ YNF++G+DGRVYEG GW + G HT YN
Sbjct: 78 IGWCDVAYNFLVGDDGRVYEGVGWNIQGLHTQGYN 112
>AL591704-1|CAI19491.1| 341|Homo sapiens peptidoglycan recognition
protein 3 protein.
Length = 341
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
I R W+AR + + P + VII HT C C +RN+QS+ + ++
Sbjct: 182 IKRSAWEARETHCPKMNL---PAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFC 238
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
DI Y+F++G DG VYEG GW + G+HT+ +N
Sbjct: 239 DIGYHFLVGQDGGVYEGVGWHIQGSHTYGFN 269
Score = 62.9 bits (146), Expect = 1e-09
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Frame = +3
Query: 459 WDISRVLWQARWANNTQRTTAFD--PIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLIN 632
WD ++ + W A P+ +I C C LR LQS+ +
Sbjct: 18 WDTPTIVSRKEWGARPLACRALLTLPVAYIITDQLPGMQCQQQSVCSQMLRGLQSHSVYT 77
Query: 633 LHY-DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
+ + D+ YNF++G+DGRVYEG GW + G HT YN
Sbjct: 78 IGWCDVAYNFLVGDDGRVYEGVGWNIQGLHTQGYN 112
>AL161636-1|CAI19556.1| 341|Homo sapiens peptidoglycan recognition
protein 3 protein.
Length = 341
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
I R W+AR + + P + VII HT C C +RN+QS+ + ++
Sbjct: 182 IKRSAWEARETHCPKMNL---PAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFC 238
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
DI Y+F++G DG VYEG GW + G+HT+ +N
Sbjct: 239 DIGYHFLVGQDGGVYEGVGWHIQGSHTYGFN 269
Score = 62.9 bits (146), Expect = 1e-09
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Frame = +3
Query: 459 WDISRVLWQARWANNTQRTTAFD--PIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLIN 632
WD ++ + W A P+ +I C C LR LQS+ +
Sbjct: 18 WDTPTIVSRKEWGARPLACRALLTLPVAYIITDQLPGMQCQQQSVCSQMLRGLQSHSVYT 77
Query: 633 LHY-DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
+ + D+ YNF++G+DGRVYEG GW + G HT YN
Sbjct: 78 IGWCDVAYNFLVGDDGRVYEGVGWNIQGLHTQGYN 112
>BC142636-1|AAI42637.1| 373|Homo sapiens PGLYRP4 protein protein.
Length = 373
Score = 68.9 bits (161), Expect = 2e-11
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLH-Y 641
+SR W A + + T P+ +++I H +C C LR LQ++ + N
Sbjct: 56 VSRKAWGAEAVGCSIQLTT--PVNVLVIHHVPGLECHDQTVCSQRLRELQAHHVHNNSGC 113
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
D+ YNF++G+DGRVYEG GW + G HT YN
Sbjct: 114 DVAYNFLVGDDGRVYEGVGWNIQGVHTQGYN 144
Score = 58.4 bits (135), Expect = 3e-08
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
+ R +W AR + + T P + II HT C C +R++QS+++ L
Sbjct: 214 VPRSVWGARETHCPRMTL---PAKYGIIIHTAGRTCNISDECRLLVRDIQSFYIDRLKSC 270
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
DI YNF++G DG +YEG GW + G+ T Y+
Sbjct: 271 DIGYNFLVGQDGAIYEGVGWNVQGSSTPGYD 301
>BC107158-1|AAI07159.1| 373|Homo sapiens peptidoglycan recognition
protein 4 protein.
Length = 373
Score = 68.9 bits (161), Expect = 2e-11
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLH-Y 641
+SR W A + + T P+ +++I H +C C LR LQ++ + N
Sbjct: 56 VSRKAWGAEAVGCSIQLTT--PVNVLVIHHVPGLECHDQTVCSQRLRELQAHHVHNNSGC 113
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
D+ YNF++G+DGRVYEG GW + G HT YN
Sbjct: 114 DVAYNFLVGDDGRVYEGVGWNIQGVHTQGYN 144
Score = 58.4 bits (135), Expect = 3e-08
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
+ R +W AR + + T P + II HT C C +R++QS+++ L
Sbjct: 214 VPRSVWGARETHCPRMTL---PAKYGIIIHTAGRTCNISDECRLLVRDIQSFYIDRLKSC 270
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
DI YNF++G DG +YEG GW + G+ T Y+
Sbjct: 271 DIGYNFLVGQDGAIYEGVGWNVQGSSTPGYD 301
>BC107157-1|AAI07158.1| 373|Homo sapiens peptidoglycan recognition
protein 4 protein.
Length = 373
Score = 68.9 bits (161), Expect = 2e-11
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLH-Y 641
+SR W A + + T P+ +++I H +C C LR LQ++ + N
Sbjct: 56 VSRKAWGAEAVGCSIQLTT--PVNVLVIHHVPGLECHDQTVCSQRLRELQAHHVHNNSGC 113
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
D+ YNF++G+DGRVYEG GW + G HT YN
Sbjct: 114 DVAYNFLVGDDGRVYEGVGWNIQGVHTQGYN 144
Score = 58.4 bits (135), Expect = 3e-08
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
+ R +W AR + + T P + II HT C C +R++QS+++ L
Sbjct: 214 VPRSVWGARETHCPRMTL---PAKYGIIIHTAGRTCNISDECRLLVRDIQSFYIDRLKSC 270
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
DI YNF++G DG +YEG GW + G+ T Y+
Sbjct: 271 DIGYNFLVGQDGAIYEGVGWNVQGSSTPGYD 301
>AY035377-1|AAK72485.1| 373|Homo sapiens peptidoglycan recognition
protein-I-beta precursor protein.
Length = 373
Score = 68.9 bits (161), Expect = 2e-11
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLH-Y 641
+SR W A + + T P+ +++I H +C C LR LQ++ + N
Sbjct: 56 VSRKAWGAEAVGCSIQLTT--PVNVLVIHHVPGLECHDQTVCSQRLRELQAHHVHNNSGC 113
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
D+ YNF++G+DGRVYEG GW + G HT YN
Sbjct: 114 DVAYNFLVGDDGRVYEGVGWNIQGVHTQGYN 144
Score = 58.4 bits (135), Expect = 3e-08
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
+ R +W AR + + T P + II HT C C +R++QS+++ L
Sbjct: 214 VPRSVWGARETHCPRMTL---PAKYGIIIHTAGRTCNISDECRLLVRDIQSFYIDRLKSC 270
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
DI YNF++G DG +YEG GW + G+ T Y+
Sbjct: 271 DIGYNFLVGQDGAIYEGVGWNVQGSSTPGYD 301
>AL591704-3|CAI19492.1| 373|Homo sapiens peptidoglycan recognition
protein 4 protein.
Length = 373
Score = 68.9 bits (161), Expect = 2e-11
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLH-Y 641
+SR W A + + T P+ +++I H +C C LR LQ++ + N
Sbjct: 56 VSRKAWGAEAVGCSIQLTT--PVNVLVIHHVPGLECHDQTVCSQRLRELQAHHVHNNSGC 113
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
D+ YNF++G+DGRVYEG GW + G HT YN
Sbjct: 114 DVAYNFLVGDDGRVYEGVGWNIQGVHTQGYN 144
Score = 58.4 bits (135), Expect = 3e-08
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
+ R +W AR + + T P + II HT C C +R++QS+++ L
Sbjct: 214 VPRSVWGARETHCPRMTL---PAKYGIIIHTAGRTCNISDECRLLVRDIQSFYIDRLKSC 270
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
DI YNF++G DG +YEG GW + G+ T Y+
Sbjct: 271 DIGYNFLVGQDGAIYEGVGWNVQGSSTPGYD 301
>AL591704-2|CAI19493.1| 369|Homo sapiens peptidoglycan recognition
protein 4 protein.
Length = 369
Score = 68.9 bits (161), Expect = 2e-11
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLH-Y 641
+SR W A + + T P+ +++I H +C C LR LQ++ + N
Sbjct: 52 VSRKAWGAEAVGCSIQLTT--PVNVLVIHHVPGLECHDQTVCSQRLRELQAHHVHNNSGC 109
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
D+ YNF++G+DGRVYEG GW + G HT YN
Sbjct: 110 DVAYNFLVGDDGRVYEGVGWNIQGVHTQGYN 140
Score = 58.4 bits (135), Expect = 3e-08
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY- 641
+ R +W AR + + T P + II HT C C +R++QS+++ L
Sbjct: 210 VPRSVWGARETHCPRMTL---PAKYGIIIHTAGRTCNISDECRLLVRDIQSFYIDRLKSC 266
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
DI YNF++G DG +YEG GW + G+ T Y+
Sbjct: 267 DIGYNFLVGQDGAIYEGVGWNVQGSSTPGYD 297
>AF242518-1|AAF99599.1| 368|Homo sapiens hypothetical protein
SBBI67 protein.
Length = 368
Score = 68.9 bits (161), Expect = 2e-11
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +3
Query: 465 ISRVLWQARWANNTQRTTAFDPIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLH-Y 641
+SR W A + + T P+ +++I H +C C LR LQ++ + N
Sbjct: 52 VSRKAWGAEAVGCSIQLTT--PVNVLVIHHVPGLECHDQTVCSQRLRELQAHHVHNNSGC 109
Query: 642 DIPYNFMIGNDGRVYEGRGWGMVGAHTFMYN 734
D+ YNF++G+DGRVYEG GW + G HT YN
Sbjct: 110 DVAYNFLVGDDGRVYEGVGWNIQGVHTQGYN 140
Score = 55.6 bits (128), Expect = 2e-07
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +3
Query: 528 PIRLVIIQHTVTPDCFTFVACVAALRNLQSYFLINLHY-DIPYNFMIGNDGRVYEGRGWG 704
P + II HT C C +R++QS+++ L DI YNF++G DG +YEG GW
Sbjct: 227 PAKYGIIIHTAGRTCNISDECRLLVRDIQSFYIDRLKSCDIGYNFLVGQDGAIYEGVGWN 286
Query: 705 MVGAHTFMYN 734
+ G+ T Y+
Sbjct: 287 VQGSSTPGYD 296
>AY358156-1|AAQ88523.1| 576|Homo sapiens AQGV3103 protein.
Length = 576
Score = 66.5 bits (155), Expect = 9e-11
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +3
Query: 528 PIRLVIIQHTVTP--DCFTFVACVAALRNLQSYFLINLHY-DIPYNFMIGNDGRVYEGRG 698
P+ + + HT P C F C A +R++Q Y + DI Y+F++G+DG VYEGRG
Sbjct: 403 PLGFLYVHHTYVPAPPCTDFTRCAANMRSMQRYHQDTQGWGDIGYSFVVGSDGYVYEGRG 462
Query: 699 WGMVGAHTFMYN 734
W VGAHT +N
Sbjct: 463 WHWVGAHTLGHN 474
>AF384856-1|AAL05629.1| 576|Homo sapiens peptidoglycan recognition
protein L precursor protein.
Length = 576
Score = 66.5 bits (155), Expect = 9e-11
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +3
Query: 528 PIRLVIIQHTVTP--DCFTFVACVAALRNLQSYFLINLHY-DIPYNFMIGNDGRVYEGRG 698
P+ + + HT P C F C A +R++Q Y + DI Y+F++G+DG VYEGRG
Sbjct: 403 PLGFLYVHHTYVPAPPCTDFTRCAANMRSMQRYHQDTQGWGDIGYSFVVGSDGYVYEGRG 462
Query: 699 WGMVGAHTFMYN 734
W VGAHT +N
Sbjct: 463 WHWVGAHTLGHN 474
>AB073610-1|BAD38647.1| 576|Homo sapiens peptidoglycan recognition
protein L precursor protein.
Length = 576
Score = 66.5 bits (155), Expect = 9e-11
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +3
Query: 528 PIRLVIIQHTVTP--DCFTFVACVAALRNLQSYFLINLHY-DIPYNFMIGNDGRVYEGRG 698
P+ + + HT P C F C A +R++Q Y + DI Y+F++G+DG VYEGRG
Sbjct: 403 PLGFLYVHHTYVPAPPCTDFTRCAANMRSMQRYHQDTQGWGDIGYSFVVGSDGYVYEGRG 462
Query: 699 WGMVGAHTFMYN 734
W VGAHT +N
Sbjct: 463 WHWVGAHTLGHN 474
>AK055882-1|BAB71034.1| 634|Homo sapiens protein ( Homo sapiens
cDNA FLJ31320 fis, clone LIVER1000542, moderately
similar to Mus musculus TAGL-alpha mRNA. ).
Length = 634
Score = 66.1 bits (154), Expect = 1e-10
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +3
Query: 528 PIRLVIIQHTVTP--DCFTFVACVAALRNLQSYFLINLHY-DIPYNFMIGNDGRVYEGRG 698
P+ + + HT P C F C A +R++Q Y + DI Y F++G+DG VYEGRG
Sbjct: 403 PLGFLYVHHTYVPAPPCTDFTRCAANMRSMQRYHQDTQGWGDIGYGFVVGSDGYVYEGRG 462
Query: 699 WGMVGAHTFMYN 734
W VGAHT +N
Sbjct: 463 WHWVGAHTLGHN 474
>AL442071-4|CAH73671.1| 5938|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5938
Score = 33.5 bits (73), Expect = 0.81
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = -2
Query: 574 KQSGVTVCWIMTSRIGSKAVVRCVLLAHLACHNTLEISHS*GAVRSPSSEEKLAMIVKYS 395
KQ G+ VC + +G ++ C A ++C N +E S V + S++EK+ + V
Sbjct: 1215 KQEGIEVCALQNEFLGKDMLIACNQTAEMSC-NKVEESERLFQVENQSAQEKVKVRVSDG 1273
Query: 394 MKATTVKSIT 365
+A + I+
Sbjct: 1274 EQAKKSREIS 1283
>AL365277-12|CAI16422.1| 5938|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5938
Score = 33.5 bits (73), Expect = 0.81
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = -2
Query: 574 KQSGVTVCWIMTSRIGSKAVVRCVLLAHLACHNTLEISHS*GAVRSPSSEEKLAMIVKYS 395
KQ G+ VC + +G ++ C A ++C N +E S V + S++EK+ + V
Sbjct: 1215 KQEGIEVCALQNEFLGKDMLIACNQTAEMSC-NKVEESERLFQVENQSAQEKVKVRVSDG 1273
Query: 394 MKATTVKSIT 365
+A + I+
Sbjct: 1274 EQAKKSREIS 1283
>AL137853-3|CAI21816.1| 5938|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5938
Score = 33.5 bits (73), Expect = 0.81
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = -2
Query: 574 KQSGVTVCWIMTSRIGSKAVVRCVLLAHLACHNTLEISHS*GAVRSPSSEEKLAMIVKYS 395
KQ G+ VC + +G ++ C A ++C N +E S V + S++EK+ + V
Sbjct: 1215 KQEGIEVCALQNEFLGKDMLIACNQTAEMSC-NKVEESERLFQVENQSAQEKVKVRVSDG 1273
Query: 394 MKATTVKSIT 365
+A + I+
Sbjct: 1274 EQAKKSREIS 1283
>AF325341-2|AAL38997.1| 5314|Homo sapiens macrophin 1 isoform 4
protein.
Length = 5314
Score = 33.5 bits (73), Expect = 0.81
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = -2
Query: 574 KQSGVTVCWIMTSRIGSKAVVRCVLLAHLACHNTLEISHS*GAVRSPSSEEKLAMIVKYS 395
KQ G+ VC + +G ++ C A ++C N +E S V + S++EK+ + V
Sbjct: 1215 KQEGIEVCALQNEFLGKDMLIACNQTAEMSC-NKVEESERLFQVENQSAQEKVKVRVSDG 1273
Query: 394 MKATTVKSIT 365
+A + I+
Sbjct: 1274 EQAKKSREIS 1283
>AF317696-1|AAL09459.1| 5938|Homo sapiens macrophin 1 isoform 4
protein.
Length = 5938
Score = 33.5 bits (73), Expect = 0.81
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = -2
Query: 574 KQSGVTVCWIMTSRIGSKAVVRCVLLAHLACHNTLEISHS*GAVRSPSSEEKLAMIVKYS 395
KQ G+ VC + +G ++ C A ++C N +E S V + S++EK+ + V
Sbjct: 1215 KQEGIEVCALQNEFLGKDMLIACNQTAEMSC-NKVEESERLFQVENQSAQEKVKVRVSDG 1273
Query: 394 MKATTVKSIT 365
+A + I+
Sbjct: 1274 EQAKKSREIS 1283
>BC037301-1|AAH37301.1| 799|Homo sapiens chromosome X open reading
frame 20 protein.
Length = 799
Score = 30.7 bits (66), Expect = 5.7
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Frame = +3
Query: 54 RSFCEFCFIFWTKMPRRGVHTESGPSTTADVIML----NDRNVATVSGDVASIQTSQFNA 221
R+ FCF +MP R ++ + TA+ L N +N A++S + +
Sbjct: 291 RALSSFCFHPNLEMPERPANSSKNSTETANYPTLMGNYNGQNTASLSVFIPPYFAEKIIL 350
Query: 222 TEGPRDVETNASN 260
TE P ETN N
Sbjct: 351 TEMPGTTETNVEN 363
>AL096763-1|CAI42219.1| 799|Homo sapiens chromosome X open reading
frame 20 protein.
Length = 799
Score = 30.7 bits (66), Expect = 5.7
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Frame = +3
Query: 54 RSFCEFCFIFWTKMPRRGVHTESGPSTTADVIML----NDRNVATVSGDVASIQTSQFNA 221
R+ FCF +MP R ++ + TA+ L N +N A++S + +
Sbjct: 291 RALSSFCFHPNLEMPERPANSSKNSTETANYPTLMGNYNGQNTASLSVFIPPYFAEKIIL 350
Query: 222 TEGPRDVETNASN 260
TE P ETN N
Sbjct: 351 TEMPGTTETNVEN 363
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,596,237
Number of Sequences: 237096
Number of extensions: 2451089
Number of successful extensions: 6322
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 5945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6293
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -