Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17k10f
         (746 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC022552-1|AAH22552.1|  248|Homo sapiens N-acetylneuraminic acid...    40   0.013
AL031673-1|CAI22444.1|  248|Homo sapiens N-acetylneuraminic acid...    40   0.013

>BC022552-1|AAH22552.1|  248|Homo sapiens N-acetylneuraminic acid
           phosphatase protein.
          Length = 248

 Score = 39.5 bits (88), Expect = 0.013
 Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
 Frame = +2

Query: 80  SDVSAILFDLDNTLIQTRKGDTKACNKLVELLQNEYGLPKDMAVESGSTFLRAFRARPDD 259
           S V A+ FDLDNTLI T     +   ++++LLQ++Y   ++  +      ++  +     
Sbjct: 4   SRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHP 63

Query: 260 ESYALHEWPAHLWRNCLPKN-----YKHIAKSVSTEWLRLRFRYLALTNDVIHLLETLRS 424
            +  + +     W   + +       + +A+     W   R +++ L  DV  +L  LR 
Sbjct: 64  YNTCITDLRTSHWEEAIQETKGGAANRKLAEECYFLWKSTRLQHMTLAEDVKAMLTELRK 123

Query: 425 VV 430
            V
Sbjct: 124 EV 125


>AL031673-1|CAI22444.1|  248|Homo sapiens N-acetylneuraminic acid
           phosphatase protein.
          Length = 248

 Score = 39.5 bits (88), Expect = 0.013
 Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
 Frame = +2

Query: 80  SDVSAILFDLDNTLIQTRKGDTKACNKLVELLQNEYGLPKDMAVESGSTFLRAFRARPDD 259
           S V A+ FDLDNTLI T     +   ++++LLQ++Y   ++  +      ++  +     
Sbjct: 4   SRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHP 63

Query: 260 ESYALHEWPAHLWRNCLPKN-----YKHIAKSVSTEWLRLRFRYLALTNDVIHLLETLRS 424
            +  + +     W   + +       + +A+     W   R +++ L  DV  +L  LR 
Sbjct: 64  YNTCITDLRTSHWEEAIQETKGGAANRKLAEECYFLWKSTRLQHMTLAEDVKAMLTELRK 123

Query: 425 VV 430
            V
Sbjct: 124 EV 125


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,958,510
Number of Sequences: 237096
Number of extensions: 2029341
Number of successful extensions: 3583
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3580
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)