Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17k10f
         (746 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    24   1.3  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    23   4.0  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    23   4.0  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   5.3  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   9.3  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 233 VGMWNRSPQPCLWEGHIHFAAV 168
           V +W+     C+W+  I FAAV
Sbjct: 354 VNLWSGFCSQCIWQEKIVFAAV 375


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 77  NSDVSAILFDLDNTLIQTRKGDTKACN 157
           N+D   ++  + N  I+  KG+T  CN
Sbjct: 101 NADDIQLVKGIANECIENAKGETDECN 127


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 77  NSDVSAILFDLDNTLIQTRKGDTKACN 157
           N+D   ++  + N  I+  KG+T  CN
Sbjct: 101 NADDIQLVKGIANECIENAKGETDECN 127


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 693 HFKEIHNSAQHSAK 734
           H+   HN A+HS+K
Sbjct: 424 HYNHNHNQARHSSK 437


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 190 PSQRHGCGERFHIPTRLQG 246
           P + H CG+ F  P  LQG
Sbjct: 42  PCKCHLCGKAFSRPWLLQG 60


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,225
Number of Sequences: 438
Number of extensions: 3709
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)