Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17k08r
         (880 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79998-1|BAA11493.1|  265|Homo sapiens KIAA0176 protein.              170   7e-42
BC033329-1|AAH33329.1|  245|Homo sapiens KCTD2 protein protein.       170   7e-42
BC007314-1|AAH07314.1|  234|Homo sapiens potassium channel tetra...   162   2e-39
AK000047-1|BAA90906.1|  234|Homo sapiens protein ( Homo sapiens ...   162   2e-39
BC031038-1|AAH31038.1|  314|Homo sapiens KCTD17 protein protein.      144   5e-34
BC025403-1|AAH25403.1|  290|Homo sapiens potassium channel tetra...   144   5e-34
AL022314-1|CAA18441.1|  290|Homo sapiens protein ( Human DNA seq...   144   5e-34
AK022304-1|BAB14007.1|  290|Homo sapiens protein ( Homo sapiens ...   144   5e-34

>D79998-1|BAA11493.1|  265|Homo sapiens KIAA0176 protein.
          Length = 265

 Score =  170 bits (413), Expect = 7e-42
 Identities = 82/117 (70%), Positives = 95/117 (81%)
 Frame = -2

Query: 879 AEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVLQFHEEELTQMVSTMSD 700
           AEEGVLEEAEFYNI  L+RLVKERI   E R  +   KHVYRVLQ  EEELTQMVSTMSD
Sbjct: 149 AEEGVLEEAEFYNIASLVRLVKERIRDNENRTSQGPVKHVYRVLQCQEEELTQMVSTMSD 208

Query: 699 GWKFEQLINIGSQYNYGNDEHAEFLCVVSRECGSTLNSNDIESTDRAKVLQQKGSRM 529
           GWKFEQLI+IGS YNYGN++ AEFLCVVSRE  ++ N   IE +++AK+LQ++GSRM
Sbjct: 209 GWKFEQLISIGSSYNYGNEDQAEFLCVVSRELNNSTNGIVIEPSEKAKILQERGSRM 265


>BC033329-1|AAH33329.1|  245|Homo sapiens KCTD2 protein protein.
          Length = 245

 Score =  170 bits (413), Expect = 7e-42
 Identities = 82/117 (70%), Positives = 95/117 (81%)
 Frame = -2

Query: 879 AEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVLQFHEEELTQMVSTMSD 700
           AEEGVLEEAEFYNI  L+RLVKERI   E R  +   KHVYRVLQ  EEELTQMVSTMSD
Sbjct: 129 AEEGVLEEAEFYNIASLVRLVKERIRDNENRTSQGPVKHVYRVLQCQEEELTQMVSTMSD 188

Query: 699 GWKFEQLINIGSQYNYGNDEHAEFLCVVSRECGSTLNSNDIESTDRAKVLQQKGSRM 529
           GWKFEQLI+IGS YNYGN++ AEFLCVVSRE  ++ N   IE +++AK+LQ++GSRM
Sbjct: 189 GWKFEQLISIGSSYNYGNEDQAEFLCVVSRELNNSTNGIVIEPSEKAKILQERGSRM 245


>BC007314-1|AAH07314.1|  234|Homo sapiens potassium channel
           tetramerisation domain containing 5 protein.
          Length = 234

 Score =  162 bits (393), Expect = 2e-39
 Identities = 77/117 (65%), Positives = 95/117 (81%)
 Frame = -2

Query: 879 AEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVLQFHEEELTQMVSTMSD 700
           AEEGVLEEAEFYNIT LI+LVK++I  R+ +  +   KHVYRVLQ  EEELTQMVSTMSD
Sbjct: 118 AEEGVLEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTMSD 177

Query: 699 GWKFEQLINIGSQYNYGNDEHAEFLCVVSRECGSTLNSNDIESTDRAKVLQQKGSRM 529
           GWKFEQL++IGS YNYGN++ AEFLCVVS+E  +T      E +++AK+LQ++GSRM
Sbjct: 178 GWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTASEPSEKAKILQERGSRM 234


>AK000047-1|BAA90906.1|  234|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20040 fis, clone COL00417. ).
          Length = 234

 Score =  162 bits (393), Expect = 2e-39
 Identities = 77/117 (65%), Positives = 95/117 (81%)
 Frame = -2

Query: 879 AEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVLQFHEEELTQMVSTMSD 700
           AEEGVLEEAEFYNIT LI+LVK++I  R+ +  +   KHVYRVLQ  EEELTQMVSTMSD
Sbjct: 118 AEEGVLEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTMSD 177

Query: 699 GWKFEQLINIGSQYNYGNDEHAEFLCVVSRECGSTLNSNDIESTDRAKVLQQKGSRM 529
           GWKFEQL++IGS YNYGN++ AEFLCVVS+E  +T      E +++AK+LQ++GSRM
Sbjct: 178 GWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTASEPSEKAKILQERGSRM 234


>BC031038-1|AAH31038.1|  314|Homo sapiens KCTD17 protein protein.
          Length = 314

 Score =  144 bits (348), Expect = 5e-34
 Identities = 69/113 (61%), Positives = 87/113 (76%)
 Frame = -2

Query: 879 AEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVLQFHEEELTQMVSTMSD 700
           AEEGVLEEAEFYNI  LIR++K+R+  ++    +   KHVYRVLQ  EEELTQMVSTMSD
Sbjct: 97  AEEGVLEEAEFYNIGPLIRIIKDRMEEKDYTVTQVPPKHVYRVLQCQEEELTQMVSTMSD 156

Query: 699 GWKFEQLINIGSQYNYGNDEHAEFLCVVSRECGSTLNSNDIESTDRAKVLQQK 541
           GW+FEQL+NIGS YNYG+++ AEFLCVVS+E  ST N    ES+ + K  +++
Sbjct: 157 GWRFEQLVNIGSSYNYGSEDQAEFLCVVSKELHSTPNGLSSESSRKTKSTEEQ 209


>BC025403-1|AAH25403.1|  290|Homo sapiens potassium channel
           tetramerisation domain containing 17 protein.
          Length = 290

 Score =  144 bits (348), Expect = 5e-34
 Identities = 69/113 (61%), Positives = 87/113 (76%)
 Frame = -2

Query: 879 AEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVLQFHEEELTQMVSTMSD 700
           AEEGVLEEAEFYNI  LIR++K+R+  ++    +   KHVYRVLQ  EEELTQMVSTMSD
Sbjct: 97  AEEGVLEEAEFYNIGPLIRIIKDRMEEKDYTVTQVPPKHVYRVLQCQEEELTQMVSTMSD 156

Query: 699 GWKFEQLINIGSQYNYGNDEHAEFLCVVSRECGSTLNSNDIESTDRAKVLQQK 541
           GW+FEQL+NIGS YNYG+++ AEFLCVVS+E  ST N    ES+ + K  +++
Sbjct: 157 GWRFEQLVNIGSSYNYGSEDQAEFLCVVSKELHSTPNGLSSESSRKTKSTEEQ 209


>AL022314-1|CAA18441.1|  290|Homo sapiens protein ( Human DNA
           sequence from clone RP5-1170K4 on chromosome
           22q12.2-13.1.Contains the MGAT3 gene for mannosyl
           (beta-1,4-)-glycoprotein  ).
          Length = 290

 Score =  144 bits (348), Expect = 5e-34
 Identities = 69/113 (61%), Positives = 87/113 (76%)
 Frame = -2

Query: 879 AEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVLQFHEEELTQMVSTMSD 700
           AEEGVLEEAEFYNI  LIR++K+R+  ++    +   KHVYRVLQ  EEELTQMVSTMSD
Sbjct: 97  AEEGVLEEAEFYNIGPLIRIIKDRMEEKDYTVTQVPPKHVYRVLQCQEEELTQMVSTMSD 156

Query: 699 GWKFEQLINIGSQYNYGNDEHAEFLCVVSRECGSTLNSNDIESTDRAKVLQQK 541
           GW+FEQL+NIGS YNYG+++ AEFLCVVS+E  ST N    ES+ + K  +++
Sbjct: 157 GWRFEQLVNIGSSYNYGSEDQAEFLCVVSKELHSTPNGLSSESSRKTKSTEEQ 209


>AK022304-1|BAB14007.1|  290|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12242 fis, clone MAMMA1001292. ).
          Length = 290

 Score =  144 bits (348), Expect = 5e-34
 Identities = 69/113 (61%), Positives = 87/113 (76%)
 Frame = -2

Query: 879 AEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVLQFHEEELTQMVSTMSD 700
           AEEGVLEEAEFYNI  LIR++K+R+  ++    +   KHVYRVLQ  EEELTQMVSTMSD
Sbjct: 97  AEEGVLEEAEFYNIGPLIRIIKDRMEEKDYTVTQVPPKHVYRVLQCQEEELTQMVSTMSD 156

Query: 699 GWKFEQLINIGSQYNYGNDEHAEFLCVVSRECGSTLNSNDIESTDRAKVLQQK 541
           GW+FEQL+NIGS YNYG+++ AEFLCVVS+E  ST N    ES+ + K  +++
Sbjct: 157 GWRFEQLVNIGSSYNYGSEDQAEFLCVVSKELHSTPNGLSSESSRKTKSTEEQ 209


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,524,383
Number of Sequences: 237096
Number of extensions: 2291013
Number of successful extensions: 3851
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3851
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)