Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17k08r
(880 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 4.9
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 4.9
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 23 4.9
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 22 6.5
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 22 6.5
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 22 6.5
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 6.5
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 6.5
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 6.5
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 6.5
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 6.5
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/35 (25%), Positives = 15/35 (42%)
Frame = +3
Query: 75 SNYKTMKQKMYKEHY*SQNFIHNSLTITIQFALLS 179
+ YK Y H + + +LT+ + LLS
Sbjct: 113 NQYKNQNNNHYTSHQHLRTHLRGTLTVNVSVLLLS 147
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 4.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 115 IISLRISFTIHSQLQYNSLSFHNKLEN 195
IIS + TIH+ YN+ +++N N
Sbjct: 314 IISSLSNKTIHNNNNYNNNNYNNNYNN 340
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -2
Query: 678 INIGSQYNYGNDEHAEFLCVVSRE 607
+N Q+ G++ AEF+C+ + E
Sbjct: 177 VNDVVQHQSGSEAEAEFVCIATPE 200
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/59 (18%), Positives = 25/59 (42%)
Frame = -2
Query: 798 RERRPLKDSKKHVYRVLQFHEEELTQMVSTMSDGWKFEQLINIGSQYNYGNDEHAEFLC 622
RER + YR + +E ++ + + + ++ + YNY N+ + + C
Sbjct: 43 REREQNSYKNEREYRKYRETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNYKKLYC 101
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/59 (18%), Positives = 25/59 (42%)
Frame = -2
Query: 798 RERRPLKDSKKHVYRVLQFHEEELTQMVSTMSDGWKFEQLINIGSQYNYGNDEHAEFLC 622
RER + YR + +E ++ + + + ++ + YNY N+ + + C
Sbjct: 43 REREQNSYKNEREYRKYRETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNYKKLYC 101
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/59 (18%), Positives = 25/59 (42%)
Frame = -2
Query: 798 RERRPLKDSKKHVYRVLQFHEEELTQMVSTMSDGWKFEQLINIGSQYNYGNDEHAEFLC 622
RER + YR + +E ++ + + + ++ + YNY N+ + + C
Sbjct: 43 REREQNSYKNEREYRKYRETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNYKKLYC 101
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 115 IISLRISFTIHSQLQYNSLSFHNKLENSTHF 207
IIS + TIH+ YN+ +++N N+ ++
Sbjct: 81 IISSLSNKTIHNNNNYNNNNYNNYNYNNNNY 111
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 115 IISLRISFTIHSQLQYNSLSFHN 183
IIS ++ TIH+ Y L ++N
Sbjct: 303 IISSLLNNTIHNNNNYKKLQYYN 325
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 115 IISLRISFTIHSQLQYNSLSFHN 183
IIS ++ TIH+ Y L ++N
Sbjct: 314 IISSLLNNTIHNNNNYKKLQYYN 336
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 115 IISLRISFTIHSQLQYNSLSFHN 183
IIS ++ TIH+ Y L ++N
Sbjct: 314 IISSLLNNTIHNNNNYKKLQYYN 336
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 115 IISLRISFTIHSQLQYNSLSFHN 183
IIS ++ TIH+ Y L ++N
Sbjct: 303 IISSLLNNTIHNNNNYKKLQYYN 325
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,239
Number of Sequences: 438
Number of extensions: 5031
Number of successful extensions: 37
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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