Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17k07f
         (789 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-55|AAZ66445.1|  199|Drosophila melanogaster CG33635-PA ...    82   7e-16
AY118429-1|AAM48458.1|  163|Drosophila melanogaster RH26504p pro...    37   0.027
AE014296-3393|AAN12138.1|  163|Drosophila melanogaster CG5104-PB...    37   0.027
AE014297-3029|AAF55911.2|  968|Drosophila melanogaster CG5849-PA...    29   9.6  

>AE014134-55|AAZ66445.1|  199|Drosophila melanogaster CG33635-PA
           protein.
          Length = 199

 Score = 82.2 bits (194), Expect = 7e-16
 Identities = 59/172 (34%), Positives = 77/172 (44%), Gaps = 2/172 (1%)
 Frame = +1

Query: 118 MANLKSDLDQYLL--QNESRRSYKFSLPSFSTPAFLXXXXXXXXXXXXXXXXXXVQKEYF 291
           M+NLKSDLD+YLL   ++ + S+   LP    P F                       + 
Sbjct: 1   MSNLKSDLDEYLLLQSDQKKPSFNVKLPQLKVPFFSSSDPEANSFLKDSDSC------FP 54

Query: 292 TLSRTQRXXXXXXXXXXXXXXXXXXXXYIPVLLLQARKFAXXXXXXXXXXXXXXXXXYGP 471
            LSR QR                    YIP L+L+ARKFA                  G 
Sbjct: 55  KLSRLQRIVGFVACLGMGALCMTLSTFYIPFLILKARKFALLYTLGSLFFILSFCFLSGF 114

Query: 472 WAHLKSMFSKERALTTSIYSITLIATLYCALHLQSTPWTIVCAVLQVMALFW 627
            + LK MFSK R LT+  YS  LI TLYCAL  +ST +T++ AV Q++AL +
Sbjct: 115 GSFLKQMFSKPRLLTSLSYSSCLILTLYCALVAKSTAFTVLFAVAQIIALLF 166


>AY118429-1|AAM48458.1|  163|Drosophila melanogaster RH26504p
           protein.
          Length = 163

 Score = 37.1 bits (82), Expect = 0.027
 Identities = 14/54 (25%), Positives = 30/54 (55%)
 Frame = +1

Query: 466 GPWAHLKSMFSKERALTTSIYSITLIATLYCALHLQSTPWTIVCAVLQVMALFW 627
           GP+  +K MF++ R + T I  + ++ T   A+  +    T++  ++Q +A+ W
Sbjct: 87  GPFKQIKKMFAETRLIATIIVLVMMVLTFIAAIVWKKAGLTLIFIIIQSLAMTW 140


>AE014296-3393|AAN12138.1|  163|Drosophila melanogaster CG5104-PB
           protein.
          Length = 163

 Score = 37.1 bits (82), Expect = 0.027
 Identities = 14/54 (25%), Positives = 30/54 (55%)
 Frame = +1

Query: 466 GPWAHLKSMFSKERALTTSIYSITLIATLYCALHLQSTPWTIVCAVLQVMALFW 627
           GP+  +K MF++ R + T I  + ++ T   A+  +    T++  ++Q +A+ W
Sbjct: 87  GPFKQIKKMFAETRLIATIIVLVMMVLTFIAAIVWKKAGLTLIFIIIQSLAMTW 140


>AE014297-3029|AAF55911.2|  968|Drosophila melanogaster CG5849-PA
           protein.
          Length = 968

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -3

Query: 250 CSSESPQCYE-TGRQALKNLVN*IYNSDDFRFEANIDLNLILDLPF 116
           CS++ P+C E T R A +++++ IY  D   + A ID  L + + +
Sbjct: 706 CSADLPECLEYTRRLAKEHIIDKIYFKDGSDYHAIIDSVLCMGVRY 751


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,107,496
Number of Sequences: 53049
Number of extensions: 632649
Number of successful extensions: 1591
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1590
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)