Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17k03f
(318 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 21 2.7
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 2.7
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 2.7
DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein. 21 3.6
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 20 6.3
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 20 6.3
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 20 6.3
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 20 6.3
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 20 6.3
DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein. 20 8.3
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 20 8.3
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 20 8.3
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 20 8.3
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 21.4 bits (43), Expect = 2.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 51 SYIC*SFVLCLVNLLIICSVSCCRNI*LFLVLFRLIYRHR 170
S++ +LC ++L +C++S R + V LIY R
Sbjct: 113 SWVSLDILLCTASILSLCAISIDRYL---AVTQPLIYSRR 149
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 2.7
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = +3
Query: 93 LIICSVSCCRNI*LFLVLFRLI 158
LI+C+V+ C ++ +V+F ++
Sbjct: 316 LIVCTVNSCTSMLSGIVIFSVV 337
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 2.7
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = +3
Query: 93 LIICSVSCCRNI*LFLVLFRLI 158
LI+C+V+ C ++ +V+F ++
Sbjct: 369 LIVCTVNSCTSMLSGIVIFSVV 390
>DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein.
Length = 135
Score = 21.0 bits (42), Expect = 3.6
Identities = 8/40 (20%), Positives = 19/40 (47%)
Frame = -1
Query: 252 SGLYSCINPLTVDTSRNRTRTASGHKQSDVGKLNETIREI 133
S + C++ +T+D ++ T ++G + I +I
Sbjct: 8 SAICVCVSAMTLDELKSGLHTVQSVCMKEIGTAQQIIDDI 47
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 20.2 bits (40), Expect = 6.3
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -1
Query: 126 YYDNTIHYRLLTN*RDTKQTTNKYMK 49
Y N IHY + N DT+ + K
Sbjct: 288 YQQNDIHYEGVQNILDTQSSAKVVSK 313
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 20.2 bits (40), Expect = 6.3
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2
Query: 23 RAFLSHYCNFIYLLVVC 73
R+ L YCN + +VC
Sbjct: 355 RSALEDYCNIVATHLVC 371
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 20.2 bits (40), Expect = 6.3
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -1
Query: 126 YYDNTIHYRLLTN*RDTKQTTNKYMK 49
Y N IHY + N DT+ + K
Sbjct: 288 YQQNDIHYEGVQNILDTQSSAKVVSK 313
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 20.2 bits (40), Expect = 6.3
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -1
Query: 126 YYDNTIHYRLLTN*RDTKQTTNKYMK 49
Y N IHY + N DT+ + K
Sbjct: 288 YQQNDIHYEGVQNILDTQSSAKVVSK 313
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.2 bits (40), Expect = 6.3
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 244 IFVYQPTNCRYVQESNPNGVRP 179
I VY+P+ CR E V P
Sbjct: 514 ILVYEPSACRPRHEIRSTDVIP 535
>DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein.
Length = 135
Score = 19.8 bits (39), Expect = 8.3
Identities = 7/40 (17%), Positives = 18/40 (45%)
Frame = -1
Query: 249 GLYSCINPLTVDTSRNRTRTASGHKQSDVGKLNETIREIV 130
G C+ LT++ + R T +++ G + +++
Sbjct: 9 GFCVCVGALTIEELKTRLHTEQSVCKTETGIDQQKANDVI 48
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 19.8 bits (39), Expect = 8.3
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = -1
Query: 180 HKQSDVGKLNETIREIV 130
H++ D+G ++TI +V
Sbjct: 585 HREEDLGSESKTINAVV 601
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 19.8 bits (39), Expect = 8.3
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = -1
Query: 180 HKQSDVGKLNETIREIV 130
H++ D+G ++TI +V
Sbjct: 553 HREEDLGSESKTINAVV 569
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 19.8 bits (39), Expect = 8.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 213 YRQLVG*YTNITRYIGDLRRNNRNLLIHH 299
Y LV YT D+ R+ RNL+ H
Sbjct: 250 YESLVHLYTRDQSETYDVLRSWRNLMDEH 278
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,489
Number of Sequences: 438
Number of extensions: 1928
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6844365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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