Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17j09f
         (796 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37140-2|CAA85502.1|  452|Caenorhabditis elegans Hypothetical pr...   178   3e-45
Z70309-7|CAB54292.1|  209|Caenorhabditis elegans Hypothetical pr...    32   0.41 
AL132949-24|CAB61102.1|  860|Caenorhabditis elegans Hypothetical...    30   2.2  
AF038608-4|AAU05594.2|  310|Caenorhabditis elegans Serpentine re...    29   2.9  
Z78415-7|CAH60759.1|  844|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z78415-5|CAB01670.1|  925|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U41546-7|AAC48217.1|  185|Caenorhabditis elegans Hypothetical pr...    28   6.7  

>Z37140-2|CAA85502.1|  452|Caenorhabditis elegans Hypothetical
           protein ZK899.2 protein.
          Length = 452

 Score =  178 bits (434), Expect = 3e-45
 Identities = 83/237 (35%), Positives = 130/237 (54%), Gaps = 1/237 (0%)
 Frame = +1

Query: 70  WLDWCVRKNDIKQLWAAQPTYIISQAVYVLAGLLTLFHAFKKGGRWPYFWLGTVLHGIYA 249
           W DW  +   +  ++    +++  + ++ L   LT  HA++ G R+   W G ++H +  
Sbjct: 35  WFDWICKYQPVSTIYENHTSFLFGEILFFLLAGLTFAHAWRSGTRFVLVWFGILVHALNV 94

Query: 250 DNFWHFVLPEYDNFWHSQTPIIFLGARLPLHIIL-LYPAFIYHAAYAVSKLNFPRYAEPF 426
           +N  +++ P+ DNFW +Q  + F GAR PL+I++ +Y  F Y +   +S+L+ P +A   
Sbjct: 95  ENLCYWI-PDMDNFWQAQGILTFFGARAPLYILIGIYHMFDYTSFVLMSRLHLPWWAYGP 153

Query: 427 AVGLVTVLIDIPYDIVAVKFVHWTWHDTDPNIFDRHYWVPWNSXXXXXXXXXXXXXXXXX 606
           AVGL  V++D+PYDI+ +K V WTWHDTDPNIFDR  WVPWNS                 
Sbjct: 154 AVGLGAVMLDMPYDIMGIKLVWWTWHDTDPNIFDRMNWVPWNSYYFHASFACSFTWILMY 213

Query: 607 IRNWYAPKVGQWASAGKKVEWKTLILATILGMPGGVLLFVPIYHPLHDIYKIHSEIT 777
            R     K   W    +++    ++ A +     G + F  +YHPLHDI+K+HSE T
Sbjct: 214 SRYKLVDKEYDWRKLPREI--LCIVFAGMGAFWLGTIQFALLYHPLHDIFKVHSEYT 268


>Z70309-7|CAB54292.1|  209|Caenorhabditis elegans Hypothetical
           protein R102.8 protein.
          Length = 209

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
 Frame = +1

Query: 265 FVLPEYDNFWHSQTPIIFLGARLPLHIILLYPAFIYHAAYAVSKLNFPRYA-EPFAVGLV 441
           +VLPE +NF++  T  +++   L + I+L+   FI   AY  +   FP+   +PF   + 
Sbjct: 23  YVLPESNNFFNPSTYRLYIHVLLTMRILLI--LFI-TVAYVTAFPGFPKTKWDPFVFDIT 79

Query: 442 TVLIDIPYDIVAVKFVHWTWHDTDPNI 522
               D   D   +  + W   DT P +
Sbjct: 80  VYCNDKTRDTYNL-LIEWWEDDTMPGM 105


>AL132949-24|CAB61102.1|  860|Caenorhabditis elegans Hypothetical
           protein Y53F4B.28 protein.
          Length = 860

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +1

Query: 661 VEWKTLILATILGMPGGVLLFVPIYHPLHDI 753
           V WKT+IL  ILGM   ++L   I+   HDI
Sbjct: 809 VFWKTVILVGILGMLHALILLPVIFILTHDI 839


>AF038608-4|AAU05594.2|  310|Caenorhabditis elegans Serpentine
           receptor, class z protein37 protein.
          Length = 310

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
 Frame = +1

Query: 142 QAVYVLAGLLTLFHAFKKGGRW-PYFWLGTVLHGIYADNFWHFVLPEYDNFWHSQTPIIF 318
           + VY++  LLT F A+     + P F     L  + +  F     P    FW S   ++F
Sbjct: 175 EIVYLVVFLLTNFLAWTSAVLYIPIFISVRKLSQLTSAQFHS---PHIYIFWQSIVVVVF 231

Query: 319 LGARLPLHIILLYPAFIYHAAYAVSKLNFPRYAEPFAV 432
               +   I  LY  ++Y  ++ +S L++  YA P  +
Sbjct: 232 KIHFIKEFISYLYFDYVYCFSFIISTLHYDIYATPLII 269


>Z78415-7|CAH60759.1|  844|Caenorhabditis elegans Hypothetical
           protein C17G1.4b protein.
          Length = 844

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 642 GFCGQKGGMENVNSSNDPGDARRCTP 719
           G  G  GG   +NSSN P  + R TP
Sbjct: 340 GVPGPSGGYGQMNSSNTPNQSERSTP 365


>Z78415-5|CAB01670.1|  925|Caenorhabditis elegans Hypothetical
           protein C17G1.4a protein.
          Length = 925

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 642 GFCGQKGGMENVNSSNDPGDARRCTP 719
           G  G  GG   +NSSN P  + R TP
Sbjct: 340 GVPGPSGGYGQMNSSNTPNQSERSTP 365


>U41546-7|AAC48217.1|  185|Caenorhabditis elegans Hypothetical
           protein T25B6.1 protein.
          Length = 185

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +3

Query: 609 QKLVCAESWTVGFCGQKGGMENVNS-SNDPGDARRCTPLRTDLSPAPRHIQNTFRDHILP 785
           +K + AE+ ++   G    +  +N  SN P  A R TPLR      P + Q+  +D+  P
Sbjct: 28  RKRISAEAGSIDSIGWLAKIRKLNQQSNPPKTAIRVTPLRPVCLLHPMYYQDEEKDYKAP 87


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,482,373
Number of Sequences: 27780
Number of extensions: 438556
Number of successful extensions: 1262
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1259
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)