Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17j09f
         (796 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    24   1.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    24   1.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    24   1.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   2.5  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   3.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.7  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   5.7  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   7.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   7.5  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   10.0 
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   10.0 
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   10.0 

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 640 WASAGKKVEWKTLILATILGMPGGVLLFVPIYHPL 744
           W +A   +    L+LAT+LG    V+L V  Y PL
Sbjct: 34  WEAAAASLTLGFLVLATVLG-NALVILSVFTYRPL 67


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 640 WASAGKKVEWKTLILATILGMPGGVLLFVPIYHPL 744
           W +A   +    L+LAT+LG    V+L V  Y PL
Sbjct: 34  WEAAAASLTLGFLVLATVLG-NALVILSVFTYRPL 67


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 640 WASAGKKVEWKTLILATILGMPGGVLLFVPIYHPL 744
           W +A   +    L+LAT+LG    V+L V  Y PL
Sbjct: 34  WEAAAASLTLGFLVLATVLG-NALVILSVFTYRPL 67


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
 Frame = +1

Query: 628 KVGQWASAGKKVEWKTLILAT------ILGMPGGVLLFVPIYHPLHDIYKIHSEITFFLL 789
           K+G W SA  + +   LIL+          +P  ++L VP+ HP +D ++   E+ +F +
Sbjct: 218 KLG-WKSARTRFDILPLILSANGHDPDYFDIPNELVLEVPLSHPTYDWFE-KLELKWFAV 275

Query: 790 XA 795
            A
Sbjct: 276 PA 277


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = -3

Query: 485 NLTATMS*GISISTVTKP-TAKG 420
           +L+  +S G+SIS  TKP T+KG
Sbjct: 537 SLSENLSSGLSISDSTKPETSKG 559



 Score = 21.4 bits (43), Expect = 10.0
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 258 EVICVNPMKYGTEPKIRPSSAFFKSMK*C 172
           E I V+P + G E K +P+S    +++ C
Sbjct: 161 EEIRVDPFRTGFEHKRQPTSIDLNAVRLC 189


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +2

Query: 599 LLRSEIGMRRKLDSGLLRAKRWNGK 673
           L+++ + ++ K DS +L AK WNG+
Sbjct: 51  LIKALLTVQAK-DSNVLAAKVWNGQ 74


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/36 (27%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +3

Query: 675 VNSSNDPGDARRCTPLRT-DLSPAPRHIQNTFRDHI 779
           VN+ NDP + R C  +   DL  +  ++++   D +
Sbjct: 158 VNNYNDPSNVRNCELVGLHDLDQSQEYVRSKLVDFL 193


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = -1

Query: 784 GRM*SLNVFCICRGAGDRSVRRGVHRLASPGSLLELTFSIPP 659
           GR+   N+  +C+  G   V++  H L     ++E     PP
Sbjct: 124 GRVRDHNISALCKELGISVVQKVSHTLYKLDEIIERNGDKPP 165


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 330 PGSQEYDRGLRMPEIIVLWQYEMPEVI 250
           PGS +  R   + E  ++ Q+E P VI
Sbjct: 671 PGSADKARNDFLTEASIMGQFEHPNVI 697


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 258 EVICVNPMKYGTEPKIRPSSAFFKSMK*C 172
           E I V+P + G E K +P+S    +++ C
Sbjct: 161 EEIRVDPFRTGFEHKRQPTSIDLNAVRLC 189


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 359 GYNKIICRGSRAPRNMIGVCECQ 291
           G + +IC  +   + +IGV ECQ
Sbjct: 8   GASVLICLLNETAKAIIGVDECQ 30


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 675 RFPFHLFARRSPLSNFRRIPISDRSK 598
           +F FH F ++ P  N+R   + +  K
Sbjct: 188 QFYFHQFYKQQPDLNYRNSDVREEMK 213


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,523
Number of Sequences: 438
Number of extensions: 6035
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)