Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17j08r
(888 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC068602-1|AAH68602.1| 432|Homo sapiens SUCLG2 protein protein. 192 1e-48
BC047024-1|AAH47024.1| 384|Homo sapiens succinate-CoA ligase, G... 192 1e-48
BC035149-1|AAH35149.1| 362|Homo sapiens SUCLG2 protein protein. 192 1e-48
BC019868-1|AAH19868.1| 321|Homo sapiens Unknown (protein for IM... 192 1e-48
BC007716-1|AAH07716.3| 384|Homo sapiens succinate-CoA ligase, G... 192 1e-48
AF131748-1|AAD20032.1| 199|Homo sapiens GTP-specific succinyl-C... 192 1e-48
AF058954-1|AAC64397.1| 404|Homo sapiens GTP-specific succinyl-C... 192 1e-48
BX640602-1|CAE45708.1| 472|Homo sapiens hypothetical protein pr... 154 4e-37
BC027587-1|AAH27587.1| 463|Homo sapiens succinate-CoA ligase, A... 154 4e-37
AL157369-4|CAI15153.1| 441|Homo sapiens succinate-CoA ligase, A... 154 4e-37
AL157369-1|CAI15149.1| 463|Homo sapiens succinate-CoA ligase, A... 154 4e-37
AL080096-1|CAB45708.2| 211|Homo sapiens hypothetical protein pr... 154 4e-37
AK001847-1|BAA91939.1| 463|Homo sapiens protein ( Homo sapiens ... 154 4e-37
AF087890-1|AAP97189.1| 403|Homo sapiens beta-succinyl CoA synth... 154 4e-37
AF058953-1|AAC64396.1| 426|Homo sapiens ATP-specific succinyl-C... 154 4e-37
AB035863-1|BAA92873.1| 463|Homo sapiens ATP specific succinyl C... 154 4e-37
AK001458-1|BAA91703.1| 441|Homo sapiens protein ( Homo sapiens ... 152 1e-36
AL157369-2|CAI15150.1| 298|Homo sapiens succinate-CoA ligase, A... 99 1e-20
BC146759-1|AAI46760.1| 1523|Homo sapiens slit homolog 3 (Drosoph... 32 3.2
AY358884-1|AAQ89243.1| 1523|Homo sapiens SLIT3 protein. 32 3.2
AB017169-1|BAA35186.1| 1523|Homo sapiens Slit-3 protein protein. 32 3.2
AB011538-1|BAA32466.2| 1559|Homo sapiens MEGF5 protein. 32 3.2
BC117190-1|AAI17191.1| 1529|Homo sapiens slit homolog 2 (Drosoph... 31 4.2
BC035517-1|AAH35517.1| 216|Homo sapiens transmembrane protein 1... 31 4.2
AY358781-1|AAQ89141.1| 216|Homo sapiens VPMH1932 protein. 31 4.2
AK172816-1|BAD18786.1| 216|Homo sapiens protein ( Homo sapiens ... 31 4.2
AK075067-1|BAC11382.1| 216|Homo sapiens protein ( Homo sapiens ... 31 4.2
AF133270-1|AAD25539.1| 1525|Homo sapiens SLIT2 protein. 31 4.2
AF055585-1|AAD04309.1| 1521|Homo sapiens neurogenic extracellula... 31 4.2
AB017168-1|BAA35185.1| 1529|Homo sapiens Slit-2 protein protein. 31 4.2
AL592301-17|CAI13948.1| 385|Homo sapiens KIAA0310 protein. 30 9.8
AK130247-1|BAC85312.1| 140|Homo sapiens protein ( Homo sapiens ... 30 9.8
AK094756-1|BAC04415.1| 385|Homo sapiens protein ( Homo sapiens ... 30 9.8
>BC068602-1|AAH68602.1| 432|Homo sapiens SUCLG2 protein protein.
Length = 432
Score = 192 bits (468), Expect = 1e-48
Identities = 94/142 (66%), Positives = 108/142 (76%)
Frame = -1
Query: 840 KGDLALDDVSETDPREREANSLNLVYIEMDGSIGCMVNGAGLAMATMDIITLNGGKPANF 661
K A+DD SE +P E EA +L YI +DG+I C VNGAGLAMAT DII LNGGKPANF
Sbjct: 271 KDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANF 330
Query: 660 LDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVSACRENPPKHPLV 481
LDLGGGV ++QV A K+L +DPKV+ I VN+FGGIVNCA IANGI ACRE K PLV
Sbjct: 331 LDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLV 390
Query: 480 IRLEGTNSGEARKILEQSGLPV 415
+RLEGTN EA+KIL SGLP+
Sbjct: 391 VRLEGTNVQEAQKILNNSGLPI 412
>BC047024-1|AAH47024.1| 384|Homo sapiens succinate-CoA ligase,
GDP-forming, beta subunit protein.
Length = 384
Score = 192 bits (468), Expect = 1e-48
Identities = 94/142 (66%), Positives = 108/142 (76%)
Frame = -1
Query: 840 KGDLALDDVSETDPREREANSLNLVYIEMDGSIGCMVNGAGLAMATMDIITLNGGKPANF 661
K A+DD SE +P E EA +L YI +DG+I C VNGAGLAMAT DII LNGGKPANF
Sbjct: 223 KDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANF 282
Query: 660 LDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVSACRENPPKHPLV 481
LDLGGGV ++QV A K+L +DPKV+ I VN+FGGIVNCA IANGI ACRE K PLV
Sbjct: 283 LDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLV 342
Query: 480 IRLEGTNSGEARKILEQSGLPV 415
+RLEGTN EA+KIL SGLP+
Sbjct: 343 VRLEGTNVQEAQKILNNSGLPI 364
>BC035149-1|AAH35149.1| 362|Homo sapiens SUCLG2 protein protein.
Length = 362
Score = 192 bits (468), Expect = 1e-48
Identities = 94/142 (66%), Positives = 108/142 (76%)
Frame = -1
Query: 840 KGDLALDDVSETDPREREANSLNLVYIEMDGSIGCMVNGAGLAMATMDIITLNGGKPANF 661
K A+DD SE +P E EA +L YI +DG+I C VNGAGLAMAT DII LNGGKPANF
Sbjct: 201 KDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANF 260
Query: 660 LDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVSACRENPPKHPLV 481
LDLGGGV ++QV A K+L +DPKV+ I VN+FGGIVNCA IANGI ACRE K PLV
Sbjct: 261 LDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLV 320
Query: 480 IRLEGTNSGEARKILEQSGLPV 415
+RLEGTN EA+KIL SGLP+
Sbjct: 321 VRLEGTNVQEAQKILNNSGLPI 342
>BC019868-1|AAH19868.1| 321|Homo sapiens Unknown (protein for
IMAGE:4996134) protein.
Length = 321
Score = 192 bits (468), Expect = 1e-48
Identities = 94/142 (66%), Positives = 108/142 (76%)
Frame = -1
Query: 840 KGDLALDDVSETDPREREANSLNLVYIEMDGSIGCMVNGAGLAMATMDIITLNGGKPANF 661
K A+DD SE +P E EA +L YI +DG+I C VNGAGLAMAT DII LNGGKPANF
Sbjct: 160 KDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANF 219
Query: 660 LDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVSACRENPPKHPLV 481
LDLGGGV ++QV A K+L +DPKV+ I VN+FGGIVNCA IANGI ACRE K PLV
Sbjct: 220 LDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLV 279
Query: 480 IRLEGTNSGEARKILEQSGLPV 415
+RLEGTN EA+KIL SGLP+
Sbjct: 280 VRLEGTNVQEAQKILNNSGLPI 301
>BC007716-1|AAH07716.3| 384|Homo sapiens succinate-CoA ligase,
GDP-forming, beta subunit protein.
Length = 384
Score = 192 bits (468), Expect = 1e-48
Identities = 94/142 (66%), Positives = 108/142 (76%)
Frame = -1
Query: 840 KGDLALDDVSETDPREREANSLNLVYIEMDGSIGCMVNGAGLAMATMDIITLNGGKPANF 661
K A+DD SE +P E EA +L YI +DG+I C VNGAGLAMAT DII LNGGKPANF
Sbjct: 223 KDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANF 282
Query: 660 LDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVSACRENPPKHPLV 481
LDLGGGV ++QV A K+L +DPKV+ I VN+FGGIVNCA IANGI ACRE K PLV
Sbjct: 283 LDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLV 342
Query: 480 IRLEGTNSGEARKILEQSGLPV 415
+RLEGTN EA+KIL SGLP+
Sbjct: 343 VRLEGTNVQEAQKILNNSGLPI 364
>AF131748-1|AAD20032.1| 199|Homo sapiens GTP-specific succinyl-CoA
synthetase beta subunit protein.
Length = 199
Score = 192 bits (468), Expect = 1e-48
Identities = 94/142 (66%), Positives = 108/142 (76%)
Frame = -1
Query: 840 KGDLALDDVSETDPREREANSLNLVYIEMDGSIGCMVNGAGLAMATMDIITLNGGKPANF 661
K A+DD SE +P E EA +L YI +DG+I C VNGAGLAMAT DII LNGGKPANF
Sbjct: 38 KDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANF 97
Query: 660 LDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVSACRENPPKHPLV 481
LDLGGGV ++QV A K+L +DPKV+ I VN+FGGIVNCA IANGI ACRE K PLV
Sbjct: 98 LDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLV 157
Query: 480 IRLEGTNSGEARKILEQSGLPV 415
+RLEGTN EA+KIL SGLP+
Sbjct: 158 VRLEGTNVQEAQKILNNSGLPI 179
>AF058954-1|AAC64397.1| 404|Homo sapiens GTP-specific succinyl-CoA
synthetase beta subunit protein.
Length = 404
Score = 192 bits (468), Expect = 1e-48
Identities = 94/142 (66%), Positives = 108/142 (76%)
Frame = -1
Query: 840 KGDLALDDVSETDPREREANSLNLVYIEMDGSIGCMVNGAGLAMATMDIITLNGGKPANF 661
K A+DD SE +P E EA +L YI +DG+I C VNGAGLAMAT DII LNGGKPANF
Sbjct: 243 KDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANF 302
Query: 660 LDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVSACRENPPKHPLV 481
LDLGGGV ++QV A K+L +DPKV+ I VN+FGGIVNCA IANGI ACRE K PLV
Sbjct: 303 LDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLV 362
Query: 480 IRLEGTNSGEARKILEQSGLPV 415
+RLEGTN EA+KIL SGLP+
Sbjct: 363 VRLEGTNVQEAQKILNNSGLPI 384
>BX640602-1|CAE45708.1| 472|Homo sapiens hypothetical protein
protein.
Length = 472
Score = 154 bits (374), Expect = 4e-37
Identities = 73/137 (53%), Positives = 98/137 (71%)
Frame = -1
Query: 825 LDDVSETDPREREANSLNLVYIEMDGSIGCMVNGAGLAMATMDIITLNGGKPANFLDLGG 646
L D ++ D R+++A NL YI +DG+IGC+VNGAGLAMATMDII L+GG PANFLD+GG
Sbjct: 300 LQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGG 359
Query: 645 GVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVSACRENPPKHPLVIRLEG 466
G QV+ A K++ SD KV I VN+FGGI+ C IA GIV A ++ K P+V+RL+G
Sbjct: 360 GATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQG 419
Query: 465 TNSGEARKILEQSGLPV 415
T +A+ ++ SGL +
Sbjct: 420 TRVDDAKALIADSGLKI 436
>BC027587-1|AAH27587.1| 463|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 463
Score = 154 bits (374), Expect = 4e-37
Identities = 73/137 (53%), Positives = 98/137 (71%)
Frame = -1
Query: 825 LDDVSETDPREREANSLNLVYIEMDGSIGCMVNGAGLAMATMDIITLNGGKPANFLDLGG 646
L D ++ D R+++A NL YI +DG+IGC+VNGAGLAMATMDII L+GG PANFLD+GG
Sbjct: 291 LQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGG 350
Query: 645 GVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVSACRENPPKHPLVIRLEG 466
G QV+ A K++ SD KV I VN+FGGI+ C IA GIV A ++ K P+V+RL+G
Sbjct: 351 GATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQG 410
Query: 465 TNSGEARKILEQSGLPV 415
T +A+ ++ SGL +
Sbjct: 411 TRVDDAKALIADSGLKI 427
>AL157369-4|CAI15153.1| 441|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 441
Score = 154 bits (374), Expect = 4e-37
Identities = 73/137 (53%), Positives = 98/137 (71%)
Frame = -1
Query: 825 LDDVSETDPREREANSLNLVYIEMDGSIGCMVNGAGLAMATMDIITLNGGKPANFLDLGG 646
L D ++ D R+++A NL YI +DG+IGC+VNGAGLAMATMDII L+GG PANFLD+GG
Sbjct: 269 LQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGG 328
Query: 645 GVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVSACRENPPKHPLVIRLEG 466
G QV+ A K++ SD KV I VN+FGGI+ C IA GIV A ++ K P+V+RL+G
Sbjct: 329 GATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQG 388
Query: 465 TNSGEARKILEQSGLPV 415
T +A+ ++ SGL +
Sbjct: 389 TRVDDAKALIADSGLKI 405
>AL157369-1|CAI15149.1| 463|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 463
Score = 154 bits (374), Expect = 4e-37
Identities = 73/137 (53%), Positives = 98/137 (71%)
Frame = -1
Query: 825 LDDVSETDPREREANSLNLVYIEMDGSIGCMVNGAGLAMATMDIITLNGGKPANFLDLGG 646
L D ++ D R+++A NL YI +DG+IGC+VNGAGLAMATMDII L+GG PANFLD+GG
Sbjct: 291 LQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGG 350
Query: 645 GVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVSACRENPPKHPLVIRLEG 466
G QV+ A K++ SD KV I VN+FGGI+ C IA GIV A ++ K P+V+RL+G
Sbjct: 351 GATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQG 410
Query: 465 TNSGEARKILEQSGLPV 415
T +A+ ++ SGL +
Sbjct: 411 TRVDDAKALIADSGLKI 427
>AL080096-1|CAB45708.2| 211|Homo sapiens hypothetical protein
protein.
Length = 211
Score = 154 bits (374), Expect = 4e-37
Identities = 73/137 (53%), Positives = 98/137 (71%)
Frame = -1
Query: 825 LDDVSETDPREREANSLNLVYIEMDGSIGCMVNGAGLAMATMDIITLNGGKPANFLDLGG 646
L D ++ D R+++A NL YI +DG+IGC+VNGAGLAMATMDII L+GG PANFLD+GG
Sbjct: 39 LQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGG 98
Query: 645 GVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVSACRENPPKHPLVIRLEG 466
G QV+ A K++ SD KV I VN+FGGI+ C IA GIV A ++ K P+V+RL+G
Sbjct: 99 GATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQG 158
Query: 465 TNSGEARKILEQSGLPV 415
T +A+ ++ SGL +
Sbjct: 159 TRVDDAKALIADSGLKI 175
>AK001847-1|BAA91939.1| 463|Homo sapiens protein ( Homo sapiens
cDNA FLJ10985 fis, clone PLACE1001817, highly similar to
Homo sapiens ATP-specific succinyl-CoA synthetase beta
subunit ).
Length = 463
Score = 154 bits (374), Expect = 4e-37
Identities = 73/137 (53%), Positives = 98/137 (71%)
Frame = -1
Query: 825 LDDVSETDPREREANSLNLVYIEMDGSIGCMVNGAGLAMATMDIITLNGGKPANFLDLGG 646
L D ++ D R+++A NL YI +DG+IGC+VNGAGLAMATMDII L+GG PANFLD+GG
Sbjct: 291 LQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGG 350
Query: 645 GVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVSACRENPPKHPLVIRLEG 466
G QV+ A K++ SD KV I VN+FGGI+ C IA GIV A ++ K P+V+RL+G
Sbjct: 351 GATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQG 410
Query: 465 TNSGEARKILEQSGLPV 415
T +A+ ++ SGL +
Sbjct: 411 TRVDDAKALIADSGLKI 427
>AF087890-1|AAP97189.1| 403|Homo sapiens beta-succinyl CoA
synthetase protein.
Length = 403
Score = 154 bits (374), Expect = 4e-37
Identities = 73/137 (53%), Positives = 98/137 (71%)
Frame = -1
Query: 825 LDDVSETDPREREANSLNLVYIEMDGSIGCMVNGAGLAMATMDIITLNGGKPANFLDLGG 646
L D ++ D R+++A NL YI +DG+IGC+VNGAGLAMATMDII L+GG PANFLD+GG
Sbjct: 231 LQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGG 290
Query: 645 GVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVSACRENPPKHPLVIRLEG 466
G QV+ A K++ SD KV I VN+FGGI+ C IA GIV A ++ K P+V+RL+G
Sbjct: 291 GATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQG 350
Query: 465 TNSGEARKILEQSGLPV 415
T +A+ ++ SGL +
Sbjct: 351 TRVDDAKALIADSGLKI 367
>AF058953-1|AAC64396.1| 426|Homo sapiens ATP-specific succinyl-CoA
synthetase beta subunit protein.
Length = 426
Score = 154 bits (374), Expect = 4e-37
Identities = 73/137 (53%), Positives = 98/137 (71%)
Frame = -1
Query: 825 LDDVSETDPREREANSLNLVYIEMDGSIGCMVNGAGLAMATMDIITLNGGKPANFLDLGG 646
L D ++ D R+++A NL YI +DG+IGC+VNGAGLAMATMDII L+GG PANFLD+GG
Sbjct: 254 LQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGG 313
Query: 645 GVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVSACRENPPKHPLVIRLEG 466
G QV+ A K++ SD KV I VN+FGGI+ C IA GIV A ++ K P+V+RL+G
Sbjct: 314 GATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQG 373
Query: 465 TNSGEARKILEQSGLPV 415
T +A+ ++ SGL +
Sbjct: 374 TRVDDAKALIADSGLKI 390
>AB035863-1|BAA92873.1| 463|Homo sapiens ATP specific succinyl CoA
synthetase beta subunit precursor protein.
Length = 463
Score = 154 bits (374), Expect = 4e-37
Identities = 73/137 (53%), Positives = 98/137 (71%)
Frame = -1
Query: 825 LDDVSETDPREREANSLNLVYIEMDGSIGCMVNGAGLAMATMDIITLNGGKPANFLDLGG 646
L D ++ D R+++A NL YI +DG+IGC+VNGAGLAMATMDII L+GG PANFLD+GG
Sbjct: 291 LQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGG 350
Query: 645 GVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVSACRENPPKHPLVIRLEG 466
G QV+ A K++ SD KV I VN+FGGI+ C IA GIV A ++ K P+V+RL+G
Sbjct: 351 GATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQG 410
Query: 465 TNSGEARKILEQSGLPV 415
T +A+ ++ SGL +
Sbjct: 411 TRVDDAKALIADSGLKI 427
>AK001458-1|BAA91703.1| 441|Homo sapiens protein ( Homo sapiens
cDNA FLJ10596 fis, clone NT2RP2004799, moderately
similar to PROBABLE SUCCINYL-COA LIGASE [GDP-FORMING],
BETA-CHAIN ).
Length = 441
Score = 152 bits (369), Expect = 1e-36
Identities = 72/137 (52%), Positives = 98/137 (71%)
Frame = -1
Query: 825 LDDVSETDPREREANSLNLVYIEMDGSIGCMVNGAGLAMATMDIITLNGGKPANFLDLGG 646
L D ++ D R+++A NL YI +DG+IGC+V+GAGLAMATMDII L+GG PANFLD+GG
Sbjct: 269 LQDWTQEDERDKDAAKANLNYIGLDGNIGCLVSGAGLAMATMDIIKLHGGTPANFLDVGG 328
Query: 645 GVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVSACRENPPKHPLVIRLEG 466
G QV+ A K++ SD KV I VN+FGGI+ C IA GIV A ++ K P+V+RL+G
Sbjct: 329 GATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQG 388
Query: 465 TNSGEARKILEQSGLPV 415
T +A+ ++ SGL +
Sbjct: 389 TRVDDAKALIADSGLKI 405
>AL157369-2|CAI15150.1| 298|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 298
Score = 99 bits (238), Expect = 1e-20
Identities = 46/77 (59%), Positives = 59/77 (76%)
Frame = -1
Query: 825 LDDVSETDPREREANSLNLVYIEMDGSIGCMVNGAGLAMATMDIITLNGGKPANFLDLGG 646
L D ++ D R+++A NL YI +DG+IGC+VNGAGLAMATMDII L+GG PANFLD+GG
Sbjct: 221 LQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGG 280
Query: 645 GVGQSQVSAALKILESD 595
G QV+ A K++ SD
Sbjct: 281 GATVHQVTEAFKLITSD 297
>BC146759-1|AAI46760.1| 1523|Homo sapiens slit homolog 3
(Drosophila) protein.
Length = 1523
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = -1
Query: 885 QLMPRLILMTMLS*TKGDLALDDVSETDPREREANSLNLVYIEMDGS-IGCMVNGAGLAM 709
Q++P L+ + T+ DL+ + + PR+ ++ +++D + I C+ +GA A+
Sbjct: 122 QVLPELLFQSTPKLTRLDLSENQIQGI-PRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 180
Query: 708 ATMDIITLNGGKPANFL 658
++I+TLN + L
Sbjct: 181 RDLEILTLNNNNISRIL 197
>AY358884-1|AAQ89243.1| 1523|Homo sapiens SLIT3 protein.
Length = 1523
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = -1
Query: 885 QLMPRLILMTMLS*TKGDLALDDVSETDPREREANSLNLVYIEMDGS-IGCMVNGAGLAM 709
Q++P L+ + T+ DL+ + + PR+ ++ +++D + I C+ +GA A+
Sbjct: 122 QVLPELLFQSTPKLTRLDLSENQIQGI-PRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 180
Query: 708 ATMDIITLNGGKPANFL 658
++I+TLN + L
Sbjct: 181 RDLEILTLNNNNISRIL 197
>AB017169-1|BAA35186.1| 1523|Homo sapiens Slit-3 protein protein.
Length = 1523
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = -1
Query: 885 QLMPRLILMTMLS*TKGDLALDDVSETDPREREANSLNLVYIEMDGS-IGCMVNGAGLAM 709
Q++P L+ + T+ DL+ + + PR+ ++ +++D + I C+ +GA A+
Sbjct: 122 QVLPELLFQSTPKLTRLDLSENQIQGI-PRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 180
Query: 708 ATMDIITLNGGKPANFL 658
++I+TLN + L
Sbjct: 181 RDLEILTLNNNNISRIL 197
>AB011538-1|BAA32466.2| 1559|Homo sapiens MEGF5 protein.
Length = 1559
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = -1
Query: 885 QLMPRLILMTMLS*TKGDLALDDVSETDPREREANSLNLVYIEMDGS-IGCMVNGAGLAM 709
Q++P L+ + T+ DL+ + + PR+ ++ +++D + I C+ +GA A+
Sbjct: 158 QVLPELLFQSTPKLTRLDLSENQIQGI-PRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 216
Query: 708 ATMDIITLNGGKPANFL 658
++I+TLN + L
Sbjct: 217 RDLEILTLNNNNISRIL 233
>BC117190-1|AAI17191.1| 1529|Homo sapiens slit homolog 2
(Drosophila) protein.
Length = 1529
Score = 31.5 bits (68), Expect = 4.2
Identities = 17/69 (24%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = -1
Query: 885 QLMPRLILMTMLS*TKGDLALDDVSETDPREREANSLNLVYIEMD-GSIGCMVNGAGLAM 709
QL P L+ + + DL+ + + + PR+ ++++ +++D I C+ +GA A+
Sbjct: 116 QLFPELLFLGTAKLYRLDLSENQI-QAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 708 ATMDIITLN 682
++++TLN
Sbjct: 175 RDLEVLTLN 183
>BC035517-1|AAH35517.1| 216|Homo sapiens transmembrane protein 139
protein.
Length = 216
Score = 31.5 bits (68), Expect = 4.2
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +2
Query: 653 RSRKLAGLPPFSVMISIVAMASPAPLTMQPILPSISMYTKLREFASLSRGSVSETSSSAR 832
R ++L PP+S ++ PAP QP P S KL + S GS+++ S R
Sbjct: 104 RPQELDQPPPYSTVV-----IPPAPEEEQPSHPEGSRRAKLEQRRMASEGSMAQEGSPGR 158
Query: 833 SP 838
+P
Sbjct: 159 AP 160
>AY358781-1|AAQ89141.1| 216|Homo sapiens VPMH1932 protein.
Length = 216
Score = 31.5 bits (68), Expect = 4.2
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +2
Query: 653 RSRKLAGLPPFSVMISIVAMASPAPLTMQPILPSISMYTKLREFASLSRGSVSETSSSAR 832
R ++L PP+S ++ PAP QP P S KL + S GS+++ S R
Sbjct: 104 RPQELDQPPPYSTVV-----IPPAPEEEQPSHPEGSRRAKLEQRRMASEGSMAQEGSPGR 158
Query: 833 SP 838
+P
Sbjct: 159 AP 160
>AK172816-1|BAD18786.1| 216|Homo sapiens protein ( Homo sapiens
cDNA FLJ23977 fis, clone HEP20612. ).
Length = 216
Score = 31.5 bits (68), Expect = 4.2
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +2
Query: 653 RSRKLAGLPPFSVMISIVAMASPAPLTMQPILPSISMYTKLREFASLSRGSVSETSSSAR 832
R ++L PP+S ++ PAP QP P S KL + S GS+++ S R
Sbjct: 104 RPQELDQPPPYSTVV-----IPPAPEEEQPSHPEGSRRAKLEQRRMASEGSMAQEGSPGR 158
Query: 833 SP 838
+P
Sbjct: 159 AP 160
>AK075067-1|BAC11382.1| 216|Homo sapiens protein ( Homo sapiens
cDNA FLJ90586 fis, clone PLACE1000912. ).
Length = 216
Score = 31.5 bits (68), Expect = 4.2
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +2
Query: 653 RSRKLAGLPPFSVMISIVAMASPAPLTMQPILPSISMYTKLREFASLSRGSVSETSSSAR 832
R ++L PP+S ++ PAP QP P S KL + S GS+++ S R
Sbjct: 104 RPQELDQPPPYSTVV-----IPPAPEEEQPSHPEGSRRAKLEQRRMASEGSMAQEGSPGR 158
Query: 833 SP 838
+P
Sbjct: 159 AP 160
>AF133270-1|AAD25539.1| 1525|Homo sapiens SLIT2 protein.
Length = 1525
Score = 31.5 bits (68), Expect = 4.2
Identities = 17/69 (24%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = -1
Query: 885 QLMPRLILMTMLS*TKGDLALDDVSETDPREREANSLNLVYIEMD-GSIGCMVNGAGLAM 709
QL P L+ + + DL+ + + + PR+ ++++ +++D I C+ +GA A+
Sbjct: 116 QLFPELLFLGTAKLYRLDLSENQI-QAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 708 ATMDIITLN 682
++++TLN
Sbjct: 175 RDLEVLTLN 183
>AF055585-1|AAD04309.1| 1521|Homo sapiens neurogenic extracellular
slit protein Slit2 protein.
Length = 1521
Score = 31.5 bits (68), Expect = 4.2
Identities = 17/69 (24%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = -1
Query: 885 QLMPRLILMTMLS*TKGDLALDDVSETDPREREANSLNLVYIEMD-GSIGCMVNGAGLAM 709
QL P L+ + + DL+ + + + PR+ ++++ +++D I C+ +GA A+
Sbjct: 116 QLFPELLFLGTAKLYRLDLSENQI-QAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 708 ATMDIITLN 682
++++TLN
Sbjct: 175 RDLEVLTLN 183
>AB017168-1|BAA35185.1| 1529|Homo sapiens Slit-2 protein protein.
Length = 1529
Score = 31.5 bits (68), Expect = 4.2
Identities = 17/69 (24%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = -1
Query: 885 QLMPRLILMTMLS*TKGDLALDDVSETDPREREANSLNLVYIEMD-GSIGCMVNGAGLAM 709
QL P L+ + + DL+ + + + PR+ ++++ +++D I C+ +GA A+
Sbjct: 116 QLFPELLFLGTAKLYRLDLSENQI-QAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 708 ATMDIITLN 682
++++TLN
Sbjct: 175 RDLEVLTLN 183
>AL592301-17|CAI13948.1| 385|Homo sapiens KIAA0310 protein.
Length = 385
Score = 30.3 bits (65), Expect = 9.8
Identities = 23/90 (25%), Positives = 44/90 (48%)
Frame = +2
Query: 458 ELVPSSLMTRGCFGGFSLHAETIPFAMVAQLTIPPKTLTKIVFTLGSDSKIFKAAETCD* 637
+L+P+S++ + LH + + +PP ++ ++ +L S + + D
Sbjct: 2 DLLPTSILLASLWICSHLHPPGV------SVDLPPTSI--LLVSLWICSHLHPPGVSVDR 53
Query: 638 PTPPPRSRKLAGLPPFSVMISIVAMASPAP 727
P PPP S L G PP S+++ + + SP P
Sbjct: 54 P-PPPSSWCLCGSPPTSILLVSLWICSPPP 82
>AK130247-1|BAC85312.1| 140|Homo sapiens protein ( Homo sapiens
cDNA FLJ26737 fis, clone PRS00528. ).
Length = 140
Score = 30.3 bits (65), Expect = 9.8
Identities = 23/90 (25%), Positives = 44/90 (48%)
Frame = +2
Query: 458 ELVPSSLMTRGCFGGFSLHAETIPFAMVAQLTIPPKTLTKIVFTLGSDSKIFKAAETCD* 637
+L+P+S++ + LH + + +PP ++ ++ +L S + + D
Sbjct: 2 DLLPTSILLASLWICSHLHPPGV------SVDLPPTSI--LLVSLWICSHLHPPGVSVDR 53
Query: 638 PTPPPRSRKLAGLPPFSVMISIVAMASPAP 727
P PPP S L G PP S+++ + + SP P
Sbjct: 54 P-PPPSSWCLCGSPPTSILLVSLWICSPPP 82
>AK094756-1|BAC04415.1| 385|Homo sapiens protein ( Homo sapiens
cDNA FLJ37437 fis, clone BRAWH2003025. ).
Length = 385
Score = 30.3 bits (65), Expect = 9.8
Identities = 23/90 (25%), Positives = 44/90 (48%)
Frame = +2
Query: 458 ELVPSSLMTRGCFGGFSLHAETIPFAMVAQLTIPPKTLTKIVFTLGSDSKIFKAAETCD* 637
+L+P+S++ + LH + + +PP ++ ++ +L S + + D
Sbjct: 2 DLLPTSILLASLWICSHLHPPGV------SVDLPPTSI--LLVSLWICSHLHPPGVSVDR 53
Query: 638 PTPPPRSRKLAGLPPFSVMISIVAMASPAP 727
P PPP S L G PP S+++ + + SP P
Sbjct: 54 P-PPPSSWCLCGSPPTSILLVSLWICSPPP 82
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,370,907
Number of Sequences: 237096
Number of extensions: 2634373
Number of successful extensions: 4944
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4936
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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