Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17j08f
(754 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC068602-1|AAH68602.1| 432|Homo sapiens SUCLG2 protein protein. 170 4e-42
AF058954-1|AAC64397.1| 404|Homo sapiens GTP-specific succinyl-C... 163 5e-40
BC047024-1|AAH47024.1| 384|Homo sapiens succinate-CoA ligase, G... 151 3e-36
BC007716-1|AAH07716.3| 384|Homo sapiens succinate-CoA ligase, G... 151 3e-36
BC035149-1|AAH35149.1| 362|Homo sapiens SUCLG2 protein protein. 148 2e-35
BX640602-1|CAE45708.1| 472|Homo sapiens hypothetical protein pr... 120 7e-27
BC027587-1|AAH27587.1| 463|Homo sapiens succinate-CoA ligase, A... 120 7e-27
AL157369-4|CAI15153.1| 441|Homo sapiens succinate-CoA ligase, A... 120 7e-27
AL157369-1|CAI15149.1| 463|Homo sapiens succinate-CoA ligase, A... 120 7e-27
AB035863-1|BAA92873.1| 463|Homo sapiens ATP specific succinyl C... 120 7e-27
AK001847-1|BAA91939.1| 463|Homo sapiens protein ( Homo sapiens ... 119 1e-26
AK001458-1|BAA91703.1| 441|Homo sapiens protein ( Homo sapiens ... 119 1e-26
AF058953-1|AAC64396.1| 426|Homo sapiens ATP-specific succinyl-C... 119 1e-26
AF087890-1|AAP97189.1| 403|Homo sapiens beta-succinyl CoA synth... 110 6e-24
AL157369-2|CAI15150.1| 298|Homo sapiens succinate-CoA ligase, A... 109 1e-23
BC019868-1|AAH19868.1| 321|Homo sapiens Unknown (protein for IM... 98 3e-20
AB065558-1|BAC05796.1| 312|Homo sapiens seven transmembrane hel... 34 0.48
AK027571-1|BAB55207.1| 409|Homo sapiens protein ( Homo sapiens ... 31 5.9
>BC068602-1|AAH68602.1| 432|Homo sapiens SUCLG2 protein protein.
Length = 432
Score = 170 bits (414), Expect = 4e-42
Identities = 88/163 (53%), Positives = 113/163 (69%), Gaps = 1/163 (0%)
Frame = +3
Query: 228 LASSTYCPRVISTRHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDT-NALSGFKADEYVV 404
LA+ + ++ S R LNLQE+ SK L+ V +Q F + D+ + A A E V+
Sbjct: 23 LAAGSQAVQLTSRRWLNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVL 82
Query: 405 KAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMV 584
KAQILAGGRGKG F++G KGGVHLTK+ + + LAK MIG L TKQTPKEG+ VNKVMV
Sbjct: 83 KAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMV 142
Query: 585 AESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIEAVAEKNP 713
AE+++I RETY +I+M+RS NG +V SP GG+DIE VA NP
Sbjct: 143 AEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNP 185
>AF058954-1|AAC64397.1| 404|Homo sapiens GTP-specific succinyl-CoA
synthetase beta subunit protein.
Length = 404
Score = 163 bits (397), Expect = 5e-40
Identities = 85/155 (54%), Positives = 107/155 (69%), Gaps = 1/155 (0%)
Frame = +3
Query: 252 RVISTRHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDT-NALSGFKADEYVVKAQILAGG 428
++ S R LNLQE+ SK L+ V +Q F + D+ + A A E V+KAQILAGG
Sbjct: 3 QLTSRRWLNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGG 62
Query: 429 RGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKR 608
RGKG F++G KGGVHLTK+ + + LAK MIG L TKQTPKEG+ VNKVMVAE+++I R
Sbjct: 63 RGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISR 122
Query: 609 ETYFSIVMERSFNGAAIVASPAGGMDIEAVAEKNP 713
ETY +I+M+RS NG +V SP G DIE VA NP
Sbjct: 123 ETYLAILMDRSCNGPVLVGSPQGRSDIEEVAASNP 157
>BC047024-1|AAH47024.1| 384|Homo sapiens succinate-CoA ligase,
GDP-forming, beta subunit protein.
Length = 384
Score = 151 bits (366), Expect = 3e-36
Identities = 76/132 (57%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
Frame = +3
Query: 321 VSIQDFRIIDSKLDT-NALSGFKADEYVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKI 497
V +Q F + D+ + A A E V+KAQILAGGRGKG F++G KGGVHLTK+ + +
Sbjct: 6 VRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVV 65
Query: 498 VDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVMERSFNGAAIVASPAG 677
LAK MIG L TKQTPKEG+ VNKVMVAE+++I RETY +I+M+RS NG +V SP G
Sbjct: 66 GQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQG 125
Query: 678 GMDIEAVAEKNP 713
G+DIE VA NP
Sbjct: 126 GVDIEEVAASNP 137
>BC007716-1|AAH07716.3| 384|Homo sapiens succinate-CoA ligase,
GDP-forming, beta subunit protein.
Length = 384
Score = 151 bits (366), Expect = 3e-36
Identities = 76/132 (57%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
Frame = +3
Query: 321 VSIQDFRIIDSKLDT-NALSGFKADEYVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKI 497
V +Q F + D+ + A A E V+KAQILAGGRGKG F++G KGGVHLTK+ + +
Sbjct: 6 VRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVV 65
Query: 498 VDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVMERSFNGAAIVASPAG 677
LAK MIG L TKQTPKEG+ VNKVMVAE+++I RETY +I+M+RS NG +V SP G
Sbjct: 66 GQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQG 125
Query: 678 GMDIEAVAEKNP 713
G+DIE VA NP
Sbjct: 126 GVDIEEVAASNP 137
>BC035149-1|AAH35149.1| 362|Homo sapiens SUCLG2 protein protein.
Length = 362
Score = 148 bits (358), Expect = 2e-35
Identities = 72/115 (62%), Positives = 87/115 (75%)
Frame = +3
Query: 369 ALSGFKADEYVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQT 548
A A E V+KAQILAGGRGKG F++G KGGVHLTK+ + + LAK MIG L TKQT
Sbjct: 1 AAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQT 60
Query: 549 PKEGILVNKVMVAESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIEAVAEKNP 713
PKEG+ VNKVMVAE+++I RETY +I+M+RS NG +V SP GG+DIE VA NP
Sbjct: 61 PKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNP 115
>BX640602-1|CAE45708.1| 472|Homo sapiens hypothetical protein
protein.
Length = 472
Score = 120 bits (288), Expect = 7e-27
Identities = 62/150 (41%), Positives = 98/150 (65%), Gaps = 1/150 (0%)
Frame = +3
Query: 267 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 443
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 60 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 119
Query: 444 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 623
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 120 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 179
Query: 624 IVMERSFNGAAIVASPAGGMDIEAVAEKNP 713
I MERSF G ++ S GG++IE VA ++P
Sbjct: 180 ITMERSFQGPVLIGSSHGGVNIEDVAAESP 209
>BC027587-1|AAH27587.1| 463|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 463
Score = 120 bits (288), Expect = 7e-27
Identities = 62/150 (41%), Positives = 98/150 (65%), Gaps = 1/150 (0%)
Frame = +3
Query: 267 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 443
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 51 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 110
Query: 444 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 623
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 111 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 170
Query: 624 IVMERSFNGAAIVASPAGGMDIEAVAEKNP 713
I MERSF G ++ S GG++IE VA ++P
Sbjct: 171 ITMERSFQGPVLIGSSHGGVNIEDVAAESP 200
>AL157369-4|CAI15153.1| 441|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 441
Score = 120 bits (288), Expect = 7e-27
Identities = 62/150 (41%), Positives = 98/150 (65%), Gaps = 1/150 (0%)
Frame = +3
Query: 267 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 443
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 29 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 88
Query: 444 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 623
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 89 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 148
Query: 624 IVMERSFNGAAIVASPAGGMDIEAVAEKNP 713
I MERSF G ++ S GG++IE VA ++P
Sbjct: 149 ITMERSFQGPVLIGSSHGGVNIEDVAAESP 178
>AL157369-1|CAI15149.1| 463|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 463
Score = 120 bits (288), Expect = 7e-27
Identities = 62/150 (41%), Positives = 98/150 (65%), Gaps = 1/150 (0%)
Frame = +3
Query: 267 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 443
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 51 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 110
Query: 444 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 623
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 111 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 170
Query: 624 IVMERSFNGAAIVASPAGGMDIEAVAEKNP 713
I MERSF G ++ S GG++IE VA ++P
Sbjct: 171 ITMERSFQGPVLIGSSHGGVNIEDVAAESP 200
>AB035863-1|BAA92873.1| 463|Homo sapiens ATP specific succinyl CoA
synthetase beta subunit precursor protein.
Length = 463
Score = 120 bits (288), Expect = 7e-27
Identities = 62/150 (41%), Positives = 98/150 (65%), Gaps = 1/150 (0%)
Frame = +3
Query: 267 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 443
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 51 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 110
Query: 444 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 623
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 111 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 170
Query: 624 IVMERSFNGAAIVASPAGGMDIEAVAEKNP 713
I MERSF G ++ S GG++IE VA ++P
Sbjct: 171 ITMERSFQGPVLIGSSHGGVNIEDVAAESP 200
>AK001847-1|BAA91939.1| 463|Homo sapiens protein ( Homo sapiens
cDNA FLJ10985 fis, clone PLACE1001817, highly similar to
Homo sapiens ATP-specific succinyl-CoA synthetase beta
subunit ).
Length = 463
Score = 119 bits (287), Expect = 1e-26
Identities = 62/150 (41%), Positives = 97/150 (64%), Gaps = 1/150 (0%)
Frame = +3
Query: 267 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 443
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 51 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 110
Query: 444 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 623
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 111 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 170
Query: 624 IVMERSFNGAAIVASPAGGMDIEAVAEKNP 713
I MERSF G ++ S GG++IE VA + P
Sbjct: 171 ITMERSFQGPVLIGSSHGGVNIEDVAAETP 200
>AK001458-1|BAA91703.1| 441|Homo sapiens protein ( Homo sapiens
cDNA FLJ10596 fis, clone NT2RP2004799, moderately
similar to PROBABLE SUCCINYL-COA LIGASE [GDP-FORMING],
BETA-CHAIN ).
Length = 441
Score = 119 bits (287), Expect = 1e-26
Identities = 62/150 (41%), Positives = 97/150 (64%), Gaps = 1/150 (0%)
Frame = +3
Query: 267 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 443
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 29 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 88
Query: 444 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 623
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 89 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 148
Query: 624 IVMERSFNGAAIVASPAGGMDIEAVAEKNP 713
I MERSF G ++ S GG++IE VA + P
Sbjct: 149 ITMERSFQGPVLIGSSHGGVNIEDVAAETP 178
>AF058953-1|AAC64396.1| 426|Homo sapiens ATP-specific succinyl-CoA
synthetase beta subunit protein.
Length = 426
Score = 119 bits (287), Expect = 1e-26
Identities = 62/150 (41%), Positives = 97/150 (64%), Gaps = 1/150 (0%)
Frame = +3
Query: 267 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 443
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 14 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 73
Query: 444 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 623
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 74 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 133
Query: 624 IVMERSFNGAAIVASPAGGMDIEAVAEKNP 713
I MERSF G ++ S GG++IE VA + P
Sbjct: 134 ITMERSFQGPVLIGSSHGGVNIEDVAAETP 163
>AF087890-1|AAP97189.1| 403|Homo sapiens beta-succinyl CoA
synthetase protein.
Length = 403
Score = 110 bits (264), Expect = 6e-24
Identities = 57/139 (41%), Positives = 89/139 (64%), Gaps = 1/139 (0%)
Frame = +3
Query: 300 DLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGHFDNGFKGGVHL 476
+LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG F++G KGGV +
Sbjct: 2 ELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKI 61
Query: 477 TKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVMERSFNGAA 656
+ ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+I MERSF G
Sbjct: 62 VFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPV 121
Query: 657 IVASPAGGMDIEAVAEKNP 713
++ S GG++IE VA + P
Sbjct: 122 LIGSSHGGVNIEDVAAETP 140
>AL157369-2|CAI15150.1| 298|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 298
Score = 109 bits (261), Expect = 1e-23
Identities = 51/107 (47%), Positives = 75/107 (70%)
Frame = +3
Query: 393 EYVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVN 572
+ V+KAQ+LAGGRGKG F++G KGGV + + ++ ++ MIG KL TKQT ++G + N
Sbjct: 24 DVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICN 83
Query: 573 KVMVAESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIEAVAEKNP 713
+V+V E +RE YF+I MERSF G ++ S GG++IE VA ++P
Sbjct: 84 QVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESP 130
>BC019868-1|AAH19868.1| 321|Homo sapiens Unknown (protein for
IMAGE:4996134) protein.
Length = 321
Score = 97.9 bits (233), Expect = 3e-20
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +3
Query: 504 LAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVMERSFNGAAIVASPAGGM 683
LAK MIG L TKQTPKEG+ VNKVMVAE+++I RETY +I+M+RS NG +V SP GG+
Sbjct: 5 LAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGV 64
Query: 684 DIEAVAEKNP 713
DIE VA NP
Sbjct: 65 DIEEVAASNP 74
>AB065558-1|BAC05796.1| 312|Homo sapiens seven transmembrane helix
receptor protein.
Length = 312
Score = 34.3 bits (75), Expect = 0.48
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = -1
Query: 751 LQKYLLELFSL-NVGFFSATASISIPPAGEATMAAPLKLLSITILKYVSLLIFTLSATIT 575
++ Y LELF + + G S T I + + + + K S + K +S TLSA I
Sbjct: 190 IETYTLELFVIADSGLLSFTCFILLLVSYIVILVSVPKKSSHGLSKALS----TLSAHII 245
Query: 574 LFTKIPSLGVCLVISLFPIIFLAKSTILSRFFVR*TPPLNP 452
+ T G C+ I ++P LA + L+ F+ TP LNP
Sbjct: 246 VVTLF--FGPCIFIYVWPFSSLASNKTLAVFYTVITPLLNP 284
>AK027571-1|BAB55207.1| 409|Homo sapiens protein ( Homo sapiens
cDNA FLJ14665 fis, clone NT2RP2002891. ).
Length = 409
Score = 30.7 bits (66), Expect = 5.9
Identities = 25/77 (32%), Positives = 34/77 (44%)
Frame = +3
Query: 504 LAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVMERSFNGAAIVASPAGGM 683
LAKN G +I TP G N V VA+ N + SIV+E N I A +
Sbjct: 332 LAKNRKGIAIIIHGTPLSGKSANAVSVAKYYNAACLSIDSIVLEAVANSNNIPGIRACEL 391
Query: 684 DIEAVAEKNPTFSENSS 734
I A E++ E ++
Sbjct: 392 CIRAAIEQSMKEGEEAA 408
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,784,338
Number of Sequences: 237096
Number of extensions: 1834815
Number of successful extensions: 2837
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2835
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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