Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17i22r
         (899 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   5.0  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    22   8.8  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              22   8.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   8.8  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    22   8.8  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   8.8  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 322 FIYYYFRSEV*IVKISLNLSTVLNIPINK 236
           FI+ YF S V   + ++ L  VL  P  K
Sbjct: 22  FIFLYFNSLVRFRRFTIELDKVLESPRGK 50


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 221 IDLYIFGHV*INSKKFYKYLLNDCGGI 141
           I++ + GHV         +L+  CGGI
Sbjct: 8   INIVVIGHVDSGKSTTTGHLIYKCGGI 34


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 440 VSAIIEFIFKYFTVN 396
           +S I+E  FKY T+N
Sbjct: 116 ISKILECFFKYKTIN 130


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 12/46 (26%), Positives = 18/46 (39%)
 Frame = +2

Query: 224 CHLHLIYRYIQNCTQI*TYLNNSYFASEVIINEWVQFIGXLLQLVN 361
           CH    Y  +       T   N     +V+I+ WV F+   +  VN
Sbjct: 463 CHADDAYMVVDTPFLASTTTTNDIKMQKVLIDFWVSFVNNGVPNVN 508


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 221 IDLYIFGHV*INSKKFYKYLLNDCGGI 141
           I++ + GHV         +L+  CGGI
Sbjct: 8   INIVVIGHVDSGKSTTTGHLIYKCGGI 34


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 12/46 (26%), Positives = 18/46 (39%)
 Frame = +2

Query: 224 CHLHLIYRYIQNCTQI*TYLNNSYFASEVIINEWVQFIGXLLQLVN 361
           CH    Y  +       T   N     +V+I+ WV F+   +  VN
Sbjct: 463 CHADDAYMVVDTPFLASTTTTNDIKMQKVLIDFWVSFVNNGVPNVN 508


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,300
Number of Sequences: 438
Number of extensions: 4615
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)