Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17i09r
         (973 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    23   4.2  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    23   4.2  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    23   4.2  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    23   4.2  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   5.5  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   5.5  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   5.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   7.3  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   9.6  

>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 769 NIYFYKLYYNVTIIAILKCPERATHSHFV 683
           N Y  KLYYN+  I  +  P    + +F+
Sbjct: 102 NNYNKKLYYNINYIEQIPIPVPVYYGNFL 130


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 769 NIYFYKLYYNVTIIAILKCPERATHSHFV 683
           N Y  KLYYN+  I  +  P    + +F+
Sbjct: 102 NNYNKKLYYNINYIEQIPIPVPVYYGNFL 130


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 769 NIYFYKLYYNVTIIAILKCPERATHSHFV 683
           N Y  KLYYN+  I  +  P    + +F+
Sbjct: 102 NNYNKKLYYNINYIEQIPIPVPVYYGNFL 130


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 769 NIYFYKLYYNVTIIAILKCPERATHSHFV 683
           N Y  KLYYN+  I  +  P    + +F+
Sbjct: 102 NNYNKKLYYNINYIEQIPIPVPVYYGNFL 130


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 920 KSNPNKKKKSTINGKYILV 864
           K NPN  K  T+  KY+ V
Sbjct: 454 KKNPNVYKVETVGDKYMAV 472


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +2

Query: 683 HKVGMSCSLRAFQYCNNCYVIIQLVKINI*KK 778
           H++ + CSL  F    NC      VK N   K
Sbjct: 78  HRINLKCSLVEFSENKNCNAGSLTVKKNFANK 109


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 920 KSNPNKKKKSTINGKYILV 864
           K NPN  K  T+  KY+ V
Sbjct: 454 KKNPNVYKVETVGDKYMAV 472


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 959  QXPTXNFSXGFCFKSNPNKKKKSTINGKYILVERQKEL 846
            Q P  +F+    +  N  K ++  +NGK     R KEL
Sbjct: 1263 QKPKMDFNVDIRYGKNCGKGERIDMNGKLRQSPRLKEL 1300


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +2

Query: 530 IRYEIHSGVCLCACTTKSHKMFRTCIYIGLRKLLKNIC 643
           + Y + SG+ LC   T +  +  T I  G+++     C
Sbjct: 694 LSYVLLSGILLCYLVTFALVLRPTDIVCGIQRFAAGFC 731


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 258,233
Number of Sequences: 438
Number of extensions: 5376
Number of successful extensions: 24
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32048835
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)