Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17i01r
         (960 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY724940-1|AAU21142.1|  319|Homo sapiens taste receptor T2R47 pr...    31   8.2  
AF494233-1|AAM19324.1|  309|Homo sapiens candidate taste recepto...    31   8.2  

>AY724940-1|AAU21142.1|  319|Homo sapiens taste receptor T2R47
           protein.
          Length = 319

 Score = 30.7 bits (66), Expect = 8.2
 Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
 Frame = +2

Query: 377 VIFLYFFIFVNTIGNFSN--LTLVKPVDSKSR*KISEHD-LITSQIITRIAILCDLV--W 541
           +IF    + +  IGNF+N  + LV  ++   R KIS  D ++T+  ++R+ +L  L+  W
Sbjct: 7   IIFSILIVVIFVIGNFANGFIALVNSIEWVKRQKISFVDQILTALAVSRVGLLWVLLLHW 66

Query: 542 RSLHF*KLFKRFSLINLSQLLHWPINDFTHTW 637
            +      F     + ++    W + +   +W
Sbjct: 67  YATQLNPAFYSVE-VRITAYNVWAVTNHFSSW 97


>AF494233-1|AAM19324.1|  309|Homo sapiens candidate taste receptor
           TAS2R47 protein.
          Length = 309

 Score = 30.7 bits (66), Expect = 8.2
 Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
 Frame = +2

Query: 377 VIFLYFFIFVNTIGNFSN--LTLVKPVDSKSR*KISEHD-LITSQIITRIAILCDLV--W 541
           +IF    + +  IGNF+N  + LV  ++   R KIS  D ++T+  ++R+ +L  L+  W
Sbjct: 7   IIFSILIVVIFVIGNFANGFIALVNSIEWVKRQKISFVDQILTALAVSRVGLLWVLLLHW 66

Query: 542 RSLHF*KLFKRFSLINLSQLLHWPINDFTHTW 637
            +      F     + ++    W + +   +W
Sbjct: 67  YATQLNPAFYSVE-VRITAYNVWAVTNHFSSW 97


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,509,664
Number of Sequences: 237096
Number of extensions: 1760802
Number of successful extensions: 3350
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3350
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12714176638
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)