Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17h16f
(770 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 100 1e-21
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 86 2e-17
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 61 1e-09
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 31 1.2
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 29 4.8
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl... 29 4.8
Z70756-9|CAA94797.1| 275|Caenorhabditis elegans Hypothetical pr... 28 8.5
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 28 8.5
U40959-4|AAA81768.1| 112|Caenorhabditis elegans Hypothetical pr... 28 8.5
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 28 8.5
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 28 8.5
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 100 bits (239), Expect = 1e-21
Identities = 75/227 (33%), Positives = 110/227 (48%), Gaps = 7/227 (3%)
Frame = +3
Query: 81 TNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGR 260
T R+IGGS ++ + +P LL ++ CGG++++ +L+AAHC D
Sbjct: 53 TLDHRLIGGSESSPHSWPWTVQLLSRLGHHR----CGGSLIDPNFVLTAAHCFAKDRRPT 108
Query: 261 -WRIRVGSTFANSGGVVHNVNRIIIHPNYNRRTADS-DLCILRSNSNIAYNNNVRPINIA 434
+ +RVG + SG H V + IHP YN S D I+R + + + RPI +
Sbjct: 109 SYSVRVGGHRSGSGSP-HRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICLP 167
Query: 435 GANYNLGDNQVVWAAGWGATSLGGS-NSEQLRHVQVWTINQNACVQRYRPINRAITANML 611
+ +N++ GWG+T G S ++ LR + V ++ C I R +ML
Sbjct: 168 --SLPAVENRLCVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSML 225
Query: 612 CSGVLDVGGRDQCQGDSGGPLLHNR----VLVGVCSWGQYCADRRFP 740
C+G G D CQGDSGGPL+ R L GV SWG CA P
Sbjct: 226 CAGY-SYGKIDSCQGDSGGPLMCARDGHWELTGVVSWGIGCARPGMP 271
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 86.2 bits (204), Expect = 2e-17
Identities = 69/226 (30%), Positives = 107/226 (47%), Gaps = 10/226 (4%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDA-TGRWRI 269
R++GG T +P AAL N CG +IL++ +++AAHC D + +
Sbjct: 26 RVVGGFETVPGAFPWTAALR---NKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEV 82
Query: 270 RVGSTFANS---GGVVHNVNRIIIHPNYNRRTADSDLCILR-SNSNIAYNNNVRPINIAG 437
VG N + + RI +P Y + D+ IL I +N +PI +
Sbjct: 83 VVGDWDNNQTDGNEQIFYLQRIHFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQPICLPS 141
Query: 438 ANYNLGDNQVVWAAGWGATSLGGSNSEQLRHVQVWTINQNACVQRYRPINRAITANMLCS 617
++ + +GWG S+G +E+L+ + IN+ CV + I +++ + C+
Sbjct: 142 KDFVYTPGRQCVVSGWG--SMGLRYAERLQAALIPIINRFDCVNSSQ-IYSSMSRSAFCA 198
Query: 618 GVLDVGGRDQCQGDSGGPLLHNR-----VLVGVCSWGQYCADRRFP 740
G L+ GG D CQGDSGGP R VL GV SWG CA ++ P
Sbjct: 199 GYLE-GGIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQP 243
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 60.9 bits (141), Expect = 1e-09
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 16/223 (7%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 272
RIIGG++ I+ A L ++ N CG +++ +++AAHC T R +
Sbjct: 37 RIIGGNS--IDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQT-RSFVY 93
Query: 273 VGSTFANSGGVVHNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNL 452
V N+ +V IH YN +TAD+D+ +LR +S+++ ++P+ + + L
Sbjct: 94 VREP-KNNRERSFSVKEAYIHSGYNNQTADNDIALLRISSDLS-KLGIKPVCLVHDDSKL 151
Query: 453 ---GDNQVVWAAG--WGATSLGGS---NSEQLRHVQVWTINQNACVQRYR---PINRAIT 599
N VV G G S G NS+ L+ V I+ + CV+ +R ++ IT
Sbjct: 152 LKQYKNGVVIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSVKIT 211
Query: 600 ANMLCSGVLDVGGRDQCQGDSGGPLLHNR-----VLVGVCSWG 713
+C+G G GDSGGPLL ++ V +G+ S+G
Sbjct: 212 GYQICAGAYLHG---TAPGDSGGPLLIHKSNGEYVQIGITSYG 251
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -1
Query: 365 TVSSTSVIVGMNDNSVHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGTKDRSLVKDVSTT 186
T ++T +I G +V T TV GT T PT + T ++GT ++ + +TT
Sbjct: 205 TTTTTVLINGTTTTTVPTNETTTTVPLNGTTTTVPTNETTTTSPLNGTTTTTVPINGATT 264
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 29.5 bits (63), Expect = 2.8
Identities = 27/118 (22%), Positives = 41/118 (34%), Gaps = 3/118 (2%)
Frame = -1
Query: 437 TSNINRTNVVVISYVGITA*DAEVTVSSTSVIVGMNDNSVHVMHNTPTVGKGGTNTNTPT 258
T++ T + IT EVT ++ V + T T T T TPT
Sbjct: 29 TADPTTTTTEATTTTEITTTTEEVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTTTTTPT 88
Query: 257 ACSVTVWTVSGTKDRSLVKDVSTTRXXXXXXXPCIQQSSYTGI---LVNVGRGATNNP 93
+ T T + T + +TT P ++ V++G G NNP
Sbjct: 89 TTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMPPCNPNAVSLGMGDANNP 146
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 28.7 bits (61), Expect = 4.8
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 2/104 (1%)
Frame = -1
Query: 500 ERCSTPTSSPNNLVITKIVIGTSNINRTNVV--VISYVGITA*DAEVTVSSTSVIVGMND 327
E T++P T I TS+ T+ V++ +T+ T +ST
Sbjct: 256 ETTKPTTTTPTTTTTTTIPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTSTSTPT------ 309
Query: 326 NSVHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGTKDRSLVKDV 195
+ + TP+ T T+T T S + T+S TK + D+
Sbjct: 310 TTTTMQTTTPSTTSTPTTTSTTTTTSASTTTISTTKPPTTQIDI 353
>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
protein 2 protein.
Length = 1080
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 345 NRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNL 452
N AD D L ++ YNNN+R N+A N NL
Sbjct: 913 NESEADYDDIYLEKQNSGKYNNNIRHGNMAFRNANL 948
>Z70756-9|CAA94797.1| 275|Caenorhabditis elegans Hypothetical
protein T06E4.11 protein.
Length = 275
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = -2
Query: 742 QGKRRSAQ----YCPQEQTPTRTRLWRRGPPESPWHWSRPPTSKTP 617
QG + SAQ Y +Q P + + + PP+ P +++PP + P
Sbjct: 41 QGYQDSAQVPQGYPQSQQAPQAPQGYPQQPPQDPTQYAQPPQQQQP 86
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 120 INQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 236
IN Y + + TW+ + C G + + R IL+A HC
Sbjct: 58 INTYTNVKNIDETWS-----KHCSGTLTSPRHILTATHC 91
>U40959-4|AAA81768.1| 112|Caenorhabditis elegans Hypothetical
protein B0310.4 protein.
Length = 112
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/46 (28%), Positives = 17/46 (36%)
Frame = -3
Query: 744 TRESDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 607
T + R + RG+ GE HR G HR H+ T
Sbjct: 15 THRGETHRGETHRGETHRGKTHRGETHRGETHRGETHRGETHRGET 60
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/46 (28%), Positives = 17/46 (36%)
Frame = -3
Query: 744 TRESDGQRSTVPKSRHQRGRGCGGEDHRSHPGTGRDHRRPKHQSTT 607
T + R + + RG GE HR G HR H+ T
Sbjct: 20 THRGETHRGETHRGKTHRGETHRGETHRGETHRGETHRGETHRGKT 65
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = -2
Query: 736 KRRSAQYCPQEQTPTRTRLWRRGPPESPWHWSRPPTSKTPEHNMLAVIA 590
K+R+ + P++ P + + R + PW S P + P + V A
Sbjct: 111 KKRAVEPTPKQAAPIKEKSKSRESKKEPWKTSTAPAATAPVTETVTVAA 159
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 183 SCGGNILNQRSILSAAHCPYG-DATGRWRIRVGSTFANS 296
+C G I++ R IL A HC G + G W + + TF S
Sbjct: 192 TCTGTIVSPRHILIATHCFAGQNRDGSWNL-IEDTFDRS 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,701,121
Number of Sequences: 27780
Number of extensions: 446544
Number of successful extensions: 1427
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1414
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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