Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17h14r
(800 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC151244-1|AAI51245.1| 1039|Homo sapiens FERM domain containing ... 33 1.2
AL365495-1|CAI13296.1| 1039|Homo sapiens novel protein (FLJ10210... 33 1.2
AL157392-5|CAI13127.1| 1039|Homo sapiens novel protein (FLJ10210... 33 1.2
AB037715-1|BAA92532.1| 1051|Homo sapiens KIAA1294 protein protein. 33 1.2
BC108907-1|AAI08908.2| 917|Homo sapiens TJP3 protein protein. 30 8.5
BC108906-1|AAI08907.1| 938|Homo sapiens TJP3 protein protein. 30 8.5
BC060780-1|AAH60780.1| 1085|Homo sapiens ALPK1 protein protein. 30 8.5
AY044164-1|AAK94675.1| 1244|Homo sapiens lymphocyte alpha-kinase... 30 8.5
AK131090-1|BAC85140.1| 853|Homo sapiens FLJ00302 protein protein. 30 8.5
AC005954-1|AAC72274.1| 952|Homo sapiens ZO-3 [Homo sapiens] pro... 30 8.5
>BC151244-1|AAI51245.1| 1039|Homo sapiens FERM domain containing 4A
protein.
Length = 1039
Score = 33.1 bits (72), Expect = 1.2
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 197 SSRRVHKLKIHXXXXXXXXXXXXPCELCRSSDADSPDASTGRRRESHVENPPVNCSS-TA 373
S R+H L +H L +D SPD T R R S+ +P +CSS T+
Sbjct: 694 SPTRLHSLALHFRHRSSSLESQGKL-LGSENDTGSPDFYTPRTRSSNGSDPMDDCSSCTS 752
Query: 374 HNKAE 388
H+ +E
Sbjct: 753 HSSSE 757
>AL365495-1|CAI13296.1| 1039|Homo sapiens novel protein (FLJ10210)
protein.
Length = 1039
Score = 33.1 bits (72), Expect = 1.2
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 197 SSRRVHKLKIHXXXXXXXXXXXXPCELCRSSDADSPDASTGRRRESHVENPPVNCSS-TA 373
S R+H L +H L +D SPD T R R S+ +P +CSS T+
Sbjct: 694 SPTRLHSLALHFRHRSSSLESQGKL-LGSENDTGSPDFYTPRTRSSNGSDPMDDCSSCTS 752
Query: 374 HNKAE 388
H+ +E
Sbjct: 753 HSSSE 757
>AL157392-5|CAI13127.1| 1039|Homo sapiens novel protein (FLJ10210)
protein.
Length = 1039
Score = 33.1 bits (72), Expect = 1.2
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 197 SSRRVHKLKIHXXXXXXXXXXXXPCELCRSSDADSPDASTGRRRESHVENPPVNCSS-TA 373
S R+H L +H L +D SPD T R R S+ +P +CSS T+
Sbjct: 694 SPTRLHSLALHFRHRSSSLESQGKL-LGSENDTGSPDFYTPRTRSSNGSDPMDDCSSCTS 752
Query: 374 HNKAE 388
H+ +E
Sbjct: 753 HSSSE 757
>AB037715-1|BAA92532.1| 1051|Homo sapiens KIAA1294 protein protein.
Length = 1051
Score = 33.1 bits (72), Expect = 1.2
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 197 SSRRVHKLKIHXXXXXXXXXXXXPCELCRSSDADSPDASTGRRRESHVENPPVNCSS-TA 373
S R+H L +H L +D SPD T R R S+ +P +CSS T+
Sbjct: 706 SPTRLHSLALHFRHRSSSLESQGKL-LGSENDTGSPDFYTPRTRSSNGSDPMDDCSSCTS 764
Query: 374 HNKAE 388
H+ +E
Sbjct: 765 HSSSE 769
>BC108907-1|AAI08908.2| 917|Homo sapiens TJP3 protein protein.
Length = 917
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 600 RLPHPSNRNAFLLHGRNSQGGGSYPHGL 683
R P P R HGR S GGGS +GL
Sbjct: 147 RRPRPGRRGRAGSHGRRSPGGGSEANGL 174
>BC108906-1|AAI08907.1| 938|Homo sapiens TJP3 protein protein.
Length = 938
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 600 RLPHPSNRNAFLLHGRNSQGGGSYPHGL 683
R P P R HGR S GGGS +GL
Sbjct: 166 RRPRPGRRGRAGSHGRRSPGGGSEANGL 193
>BC060780-1|AAH60780.1| 1085|Homo sapiens ALPK1 protein protein.
Length = 1085
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 592 SYNDCPTPQTETHFCYTAEIARVVVATHTDSQEVLPPVTVRPNLHIFCR 738
S NDCP H C E + + T D + PVT + LH F +
Sbjct: 312 SSNDCPPELKNLHLCEAKEAFEIGLLTKRDDE----PVTGKQELHSFVK 356
>AY044164-1|AAK94675.1| 1244|Homo sapiens lymphocyte alpha-kinase
protein.
Length = 1244
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 592 SYNDCPTPQTETHFCYTAEIARVVVATHTDSQEVLPPVTVRPNLHIFCR 738
S NDCP H C E + + T D + PVT + LH F +
Sbjct: 312 SSNDCPPELKNLHLCEAKEAFEIGLLTKRDDE----PVTGKQELHSFVK 356
>AK131090-1|BAC85140.1| 853|Homo sapiens FLJ00302 protein protein.
Length = 853
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 592 SYNDCPTPQTETHFCYTAEIARVVVATHTDSQEVLPPVTVRPNLHIFCR 738
S NDCP H C E + + T D + PVT + LH F +
Sbjct: 143 SSNDCPPELKNLHLCEAKEAFEIGLLTKRDDE----PVTGKQELHSFVK 187
>AC005954-1|AAC72274.1| 952|Homo sapiens ZO-3 [Homo sapiens]
protein.
Length = 952
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 600 RLPHPSNRNAFLLHGRNSQGGGSYPHGL 683
R P P R HGR S GGGS +GL
Sbjct: 166 RRPRPGRRGRAGSHGRRSPGGGSEANGL 193
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,098,268
Number of Sequences: 237096
Number of extensions: 3101972
Number of successful extensions: 5995
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5995
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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