Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17h14f
         (734 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70213-6|CAA94176.1|  167|Caenorhabditis elegans Hypothetical pr...    37   0.017
U80437-8|AAB37623.1|  630|Caenorhabditis elegans Exocyst compone...    32   0.37 
AL034365-8|CAA22260.2|  364|Caenorhabditis elegans Hypothetical ...    30   1.5  
Z73970-3|CAA98242.2|  773|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AC092690-2|AAK73855.2|  745|Caenorhabditis elegans Hypothetical ...    28   7.9  

>Z70213-6|CAA94176.1|  167|Caenorhabditis elegans Hypothetical
           protein ZK930.7 protein.
          Length = 167

 Score = 36.7 bits (81), Expect = 0.017
 Identities = 27/100 (27%), Positives = 47/100 (47%)
 Frame = +1

Query: 379 LDGVDQNNRC*LLTRAQSTSTTQMLPPSLQHEFYVLSSIVQRIPTLQPGTQNWFGAKISR 558
           L  VD  +RC       S+  TQ  P ++    +V+S+   + P+L     NW  ++ S 
Sbjct: 10  LADVDDGSRC-----ESSSILTQNQPTTIASSGFVMSNPNVKSPSLPSSATNW-NSEYS- 62

Query: 559 VMVPTLADSQDVLAPSVYNRGSQILSLIDLFQNLAGSYEP 678
           V  PT++ +  +L  SV  +   ++ L +L Q     Y+P
Sbjct: 63  VTEPTMSPADQILKDSVARKKRSMVDLTELNQLYGKGYKP 102


>U80437-8|AAB37623.1|  630|Caenorhabditis elegans Exocyst component
           protein 7 protein.
          Length = 630

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
 Frame = +1

Query: 415 LTRAQSTSTTQMLPPSLQHEFYVLSSIVQRIPTL--QPGTQNWFGAKISRVMVPTLADSQ 588
           LT  Q ++T  +LP         L S++++   L   P     F       +  TLAD Q
Sbjct: 436 LTAPQGSNTNLLLPKLFARILSALGSMLKKKANLYDDPTLATIFLLNNYNYIAKTLADEQ 495

Query: 589 DVLAPSVYNRGSQILS 636
           D L P++    S ILS
Sbjct: 496 DGLLPAITEMNSNILS 511


>AL034365-8|CAA22260.2|  364|Caenorhabditis elegans Hypothetical
           protein Y69E1A.8 protein.
          Length = 364

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 9/78 (11%)
 Frame = +3

Query: 165 QVIDSYEGEYDFLQLFINDCYLQSPNII------ISTSSLTYPETNFEF---QFEKNVSY 317
           Q+ D YE EYD+   +  D    +  +I       S + L + E N+      FE    +
Sbjct: 81  QIADRYEAEYDYCMRWACDYKYVAAKVIPFQSNFYSVAKLIFKEKNWALDCANFEGGYDF 140

Query: 318 C*WFHKISDGCTEKVSFL 371
           C W   +S     K S L
Sbjct: 141 CGWLPSVSASIRMKKSLL 158


>Z73970-3|CAA98242.2|  773|Caenorhabditis elegans Hypothetical
           protein C29A12.3a protein.
          Length = 773

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -3

Query: 480 IELMLQAGWEHLGC*CRLSPGK*LTPVVLVHPVQSITKM 364
           IE+ L  G E L   C+LSPG  L P +L HP + I ++
Sbjct: 238 IEVALTEGVEALVEKCKLSPGIPLKP-MLAHPTKGIDEI 275


>AC092690-2|AAK73855.2|  745|Caenorhabditis elegans Hypothetical
           protein BE0003N10.1 protein.
          Length = 745

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +3

Query: 528 AELVRGKNKQGDGTH-PCGLTRRPSTIGIQQRVPDFITHRPLSK 656
           A +V+ K+KQGDG+  P  +  RPS   I  R+P     R LS+
Sbjct: 64  ATVVQRKSKQGDGSGVPLQVEYRPSASAI-GRIPTNFLRRELSQ 106


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,368,560
Number of Sequences: 27780
Number of extensions: 348004
Number of successful extensions: 740
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)