Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17h01f
         (774 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011521-1|AAS15657.1|  292|Drosophila melanogaster RH44796p pro...   352   3e-97
AE014296-2109|AAF49947.2|  282|Drosophila melanogaster CG6910-PA...   343   2e-94
AF495912-1|AAN60444.1| 2576|Drosophila melanogaster nesprin prot...    33   0.44 
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P...    33   0.44 
AY084184-1|AAL89922.1|  390|Drosophila melanogaster RE65257p pro...    30   4.1  
AE014296-3338|AAF51578.1|  390|Drosophila melanogaster CG5649-PA...    30   4.1  
BT021950-1|AAX51655.1|  346|Drosophila melanogaster GM02004p pro...    29   9.4  
AY124548-1|AAM94031.1|  499|Drosophila melanogaster tyrosylprote...    29   9.4  
AY119073-1|AAM50933.1|  499|Drosophila melanogaster LP09162p pro...    29   9.4  
AE014298-1921|AAF48286.2|  499|Drosophila melanogaster CG32632-P...    29   9.4  

>BT011521-1|AAS15657.1|  292|Drosophila melanogaster RH44796p
           protein.
          Length = 292

 Score =  352 bits (866), Expect = 3e-97
 Identities = 151/225 (67%), Positives = 178/225 (79%)
 Frame = +3

Query: 99  VSMIDPSQLLRPEPTFNDKPIDAFRDYSVDDTDPIKERVRRTYYLMHSNVTVDLVKQKRE 278
           V ++DPS+L+RPEPTF DK    FRDYS+D TDP+KERVR+TY  MH N TVD VK +RE
Sbjct: 9   VQLLDPSELMRPEPTFADKNPSKFRDYSMDTTDPLKERVRQTYRQMHLNQTVDFVKGRRE 68

Query: 279 KWLKFNHFKATVKDALIKLNELVDESDPDTDLPNIVHAFQTAERIREDHPDEDWFHLTGL 458
            WLKFN  K TV++AL KLN+LVDESDPD DLPNI+HAFQ AER R + P+ DW HLT L
Sbjct: 69  HWLKFNTIKMTVREALEKLNDLVDESDPDLDLPNIIHAFQAAERARAEFPEHDWLHLTAL 128

Query: 459 IHDLGKVMAFYDEPQWCVVGDTFPVGCKWADSIVYGPESFKDNPDTYNPKYNTKYGMYKP 638
           IHDLGK+MAFY EPQW VVGDTF VGC+W DSIVY  ESF+ NPD  NP YNT+ G+Y+P
Sbjct: 129 IHDLGKIMAFYGEPQWAVVGDTFAVGCRWGDSIVYRDESFEGNPDGDNPAYNTELGIYQP 188

Query: 639 HCGIDNLLMSWSHDEYLYQFLLHNKSTIPEKGLYMIRYHSFYPWH 773
           +CG+DNLLMSW HDEY+Y  L HNK+ +P     +IR+HSFYPWH
Sbjct: 189 NCGVDNLLMSWGHDEYMYSVLKHNKTKLPHVACNIIRFHSFYPWH 233


>AE014296-2109|AAF49947.2|  282|Drosophila melanogaster CG6910-PA
           protein.
          Length = 282

 Score =  343 bits (842), Expect = 2e-94
 Identities = 147/219 (67%), Positives = 173/219 (78%)
 Frame = +3

Query: 117 SQLLRPEPTFNDKPIDAFRDYSVDDTDPIKERVRRTYYLMHSNVTVDLVKQKREKWLKFN 296
           ++L+RPEPTF DK    FRDYS+D TDP+KERVR+TY  MH N TVD VK +RE WLKFN
Sbjct: 5   AELMRPEPTFADKNPSKFRDYSMDTTDPLKERVRQTYRQMHLNQTVDFVKGRREHWLKFN 64

Query: 297 HFKATVKDALIKLNELVDESDPDTDLPNIVHAFQTAERIREDHPDEDWFHLTGLIHDLGK 476
             K TV++AL KLN+LVDESDPD DLPNI+HAFQ AER R + P+ DW HLT LIHDLGK
Sbjct: 65  TIKMTVREALEKLNDLVDESDPDLDLPNIIHAFQAAERARAEFPEHDWLHLTALIHDLGK 124

Query: 477 VMAFYDEPQWCVVGDTFPVGCKWADSIVYGPESFKDNPDTYNPKYNTKYGMYKPHCGIDN 656
           +MAFY EPQW VVGDTF VGC+W DSIVY  ESF+ NPD  NP YNT+ G+Y+P+CG+DN
Sbjct: 125 IMAFYGEPQWAVVGDTFAVGCRWGDSIVYRDESFEGNPDGDNPAYNTELGIYQPNCGVDN 184

Query: 657 LLMSWSHDEYLYQFLLHNKSTIPEKGLYMIRYHSFYPWH 773
           LLMSW HDEY+Y  L HNK+ +P     +IR+HSFYPWH
Sbjct: 185 LLMSWGHDEYMYSVLKHNKTKLPHVACNIIRFHSFYPWH 223


>AF495912-1|AAN60444.1| 2576|Drosophila melanogaster nesprin
           protein.
          Length = 2576

 Score = 33.1 bits (72), Expect = 0.44
 Identities = 21/124 (16%), Positives = 56/124 (45%), Gaps = 10/124 (8%)
 Frame = +3

Query: 207 ERVRRTYYLMHSNVTVDLVKQKREKWLKFNHFKATVKDALIKLNELVDESDPDTDLPNIV 386
           E +    YL+  N      ++K + + + N   +T+K  +++L   + +++P+  L   V
Sbjct: 285 ETIEYRVYLIRQNSNEGPSEEKLDNYNQLNDELSTIKQNVVQLERQLSKAEPEPQLLQCV 344

Query: 387 HAFQ----TAERIREDHPDED------WFHLTGLIHDLGKVMAFYDEPQWCVVGDTFPVG 536
            + +      E++ + +  +D      W +   L++++  V+A   +    ++   +P+ 
Sbjct: 345 DSLKEHVDAVEQVTQQNQVQDSNDLDKWHNFEVLLYNVSSVLADLQQSYDLLINQEYPLS 404

Query: 537 CKWA 548
            K A
Sbjct: 405 AKLA 408


>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
            isoform D protein.
          Length = 11707

 Score = 33.1 bits (72), Expect = 0.44
 Identities = 21/124 (16%), Positives = 56/124 (45%), Gaps = 10/124 (8%)
 Frame = +3

Query: 207  ERVRRTYYLMHSNVTVDLVKQKREKWLKFNHFKATVKDALIKLNELVDESDPDTDLPNIV 386
            E +    YL+  N      ++K + + + N   +T+K  +++L   + +++P+  L   V
Sbjct: 9416 ETIEYRVYLIRQNSNEGPSEEKLDNYNQLNDELSTIKQNVVQLERQLSKAEPEPQLLQCV 9475

Query: 387  HAFQ----TAERIREDHPDED------WFHLTGLIHDLGKVMAFYDEPQWCVVGDTFPVG 536
             + +      E++ + +  +D      W +   L++++  V+A   +    ++   +P+ 
Sbjct: 9476 DSLKEHVDAVEQVTQQNQVQDSNDLDKWHNFEVLLYNVSSVLADLQQSYDLLINQEYPLS 9535

Query: 537  CKWA 548
             K A
Sbjct: 9536 AKLA 9539


>AY084184-1|AAL89922.1|  390|Drosophila melanogaster RE65257p
           protein.
          Length = 390

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 18/79 (22%), Positives = 31/79 (39%)
 Frame = +3

Query: 90  KKPVSMIDPSQLLRPEPTFNDKPIDAFRDYSVDDTDPIKERVRRTYYLMHSNVTVDLVKQ 269
           K+P    +     +P+    D    +  D  +   +  KER  R  Y +H  + V  + +
Sbjct: 228 KRPAPEAEEKVFKKPKSVAGDSQTRSVLDEIIKQEESKKERANRKDYWLHKGIVVKFISK 287

Query: 270 KREKWLKFNHFKATVKDAL 326
              +  KF   KA V D +
Sbjct: 288 SMGE--KFFKQKAVVLDVI 304


>AE014296-3338|AAF51578.1|  390|Drosophila melanogaster CG5649-PA
           protein.
          Length = 390

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 18/79 (22%), Positives = 31/79 (39%)
 Frame = +3

Query: 90  KKPVSMIDPSQLLRPEPTFNDKPIDAFRDYSVDDTDPIKERVRRTYYLMHSNVTVDLVKQ 269
           K+P    +     +P+    D    +  D  +   +  KER  R  Y +H  + V  + +
Sbjct: 228 KRPAPEAEEKVFKKPKSVAGDSQTRSVLDEIIKQEESKKERANRKDYWLHKGIVVKFISK 287

Query: 270 KREKWLKFNHFKATVKDAL 326
              +  KF   KA V D +
Sbjct: 288 SMGE--KFFKQKAVVLDVI 304


>BT021950-1|AAX51655.1|  346|Drosophila melanogaster GM02004p
           protein.
          Length = 346

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -2

Query: 344 QLIELDESILHCGLEVVEL*PFLAFLFDQIDGNIGVHQVVS 222
           +L   D   L  G  V+EL P   FLF   DG   VH ++S
Sbjct: 156 RLCNKDPLTLKMGSYVIELFPNAKFLFMVRDGRATVHSIIS 196


>AY124548-1|AAM94031.1|  499|Drosophila melanogaster tyrosylprotein
           sulfotransferase protein.
          Length = 499

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -2

Query: 344 QLIELDESILHCGLEVVEL*PFLAFLFDQIDGNIGVHQVVS 222
           +L   D   L  G  V+EL P   FLF   DG   VH ++S
Sbjct: 156 RLCNKDPLTLKMGSYVIELFPNAKFLFMVRDGRATVHSIIS 196


>AY119073-1|AAM50933.1|  499|Drosophila melanogaster LP09162p
           protein.
          Length = 499

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -2

Query: 344 QLIELDESILHCGLEVVEL*PFLAFLFDQIDGNIGVHQVVS 222
           +L   D   L  G  V+EL P   FLF   DG   VH ++S
Sbjct: 156 RLCNKDPLTLKMGSYVIELFPNAKFLFMVRDGRATVHSIIS 196


>AE014298-1921|AAF48286.2|  499|Drosophila melanogaster CG32632-PB
           protein.
          Length = 499

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -2

Query: 344 QLIELDESILHCGLEVVEL*PFLAFLFDQIDGNIGVHQVVS 222
           +L   D   L  G  V+EL P   FLF   DG   VH ++S
Sbjct: 156 RLCNKDPLTLKMGSYVIELFPNAKFLFMVRDGRATVHSIIS 196


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,337,509
Number of Sequences: 53049
Number of extensions: 772086
Number of successful extensions: 2001
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2001
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)