Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17g22f
(754 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119275-1|AAM51135.1| 174|Drosophila melanogaster SD26038p pro... 153 2e-37
AE014297-1955|AAF55142.2| 174|Drosophila melanogaster CG4210-PA... 153 2e-37
BT001882-1|AAN71656.1| 142|Drosophila melanogaster SD13446p pro... 122 4e-28
AE014297-1956|AAN13633.1| 142|Drosophila melanogaster CG4210-PB... 122 4e-28
EF058010-1|ABL84945.1| 1200|Drosophila melanogaster Nup133 protein. 29 5.2
EF058009-1|ABL84944.1| 1200|Drosophila melanogaster Nup133 protein. 29 5.2
EF058008-1|ABL84943.1| 1200|Drosophila melanogaster Nup133 protein. 29 5.2
EF058007-1|ABL84942.1| 1200|Drosophila melanogaster Nup133 protein. 29 5.2
EF058006-1|ABL84941.1| 1200|Drosophila melanogaster Nup133 protein. 29 5.2
EF058005-1|ABL84940.1| 1200|Drosophila melanogaster Nup133 protein. 29 5.2
EF058004-1|ABL84939.1| 1200|Drosophila melanogaster Nup133 protein. 29 5.2
EF058003-1|ABL84938.1| 1200|Drosophila melanogaster Nup133 protein. 29 5.2
EF058002-1|ABL84937.1| 1200|Drosophila melanogaster Nup133 protein. 29 5.2
EF058001-1|ABL84936.1| 1200|Drosophila melanogaster Nup133 protein. 29 5.2
EF058000-1|ABL84935.1| 1200|Drosophila melanogaster Nup133 protein. 29 5.2
BT003226-1|AAO24981.1| 1200|Drosophila melanogaster LP09464p pro... 29 5.2
AY051721-1|AAK93145.1| 1020|Drosophila melanogaster LD25077p pro... 29 5.2
AE014297-3210|AAF56042.2| 1200|Drosophila melanogaster CG6958-PA... 29 5.2
>AY119275-1|AAM51135.1| 174|Drosophila melanogaster SD26038p
protein.
Length = 174
Score = 153 bits (372), Expect = 2e-37
Identities = 79/167 (47%), Positives = 103/167 (61%), Gaps = 3/167 (1%)
Frame = +3
Query: 204 KSGEVIVRAATKHDMSAVAEMIQELADYEKMSDGPKLSIKDLVHDGFEKQPPEFFCKV-- 377
KSGE R A D+ V MIQELAD+EKMS+GP+L+ +DL D E+ C+V
Sbjct: 3 KSGEFTFRRALAEDIKDVLSMIQELADFEKMSNGPQLTEEDLKRDAGLTGGQEY-CEVYV 61
Query: 378 -AEKHKENILGYAIYFPVYSTWEGRALMLEDLYVRMNERRRGVGRLLFDAVAKEASATGC 554
+ + +GY+I + YSTW+GR +ED+YVR R+RG G+ +F VA A C
Sbjct: 62 LVDNDTDQAIGYSICYKAYSTWQGRYFFVEDIYVRPEHRKRGAGKRIFLEVASRAVELQC 121
Query: 555 CRLDFHVLEWNPACSFYESKGAVNLTNKEQWCYYRLTGDALRDFAKD 695
RL+F+VLEWNPA FYES GAV+LT+KE W YYR+ L A D
Sbjct: 122 PRLEFNVLEWNPARKFYESLGAVDLTDKEGWHYYRVEEQQLAKLAAD 168
>AE014297-1955|AAF55142.2| 174|Drosophila melanogaster CG4210-PA,
isoform A protein.
Length = 174
Score = 153 bits (372), Expect = 2e-37
Identities = 79/167 (47%), Positives = 103/167 (61%), Gaps = 3/167 (1%)
Frame = +3
Query: 204 KSGEVIVRAATKHDMSAVAEMIQELADYEKMSDGPKLSIKDLVHDGFEKQPPEFFCKV-- 377
KSGE R A D+ V MIQELAD+EKMS+GP+L+ +DL D E+ C+V
Sbjct: 3 KSGEFTFRRALAEDIKDVLSMIQELADFEKMSNGPQLTEEDLKRDAGLTGGQEY-CEVYV 61
Query: 378 -AEKHKENILGYAIYFPVYSTWEGRALMLEDLYVRMNERRRGVGRLLFDAVAKEASATGC 554
+ + +GY+I + YSTW+GR +ED+YVR R+RG G+ +F VA A C
Sbjct: 62 LVDNDTDQAIGYSICYKAYSTWQGRYFFVEDIYVRPEHRKRGAGKRIFLEVASRAVELQC 121
Query: 555 CRLDFHVLEWNPACSFYESKGAVNLTNKEQWCYYRLTGDALRDFAKD 695
RL+F+VLEWNPA FYES GAV+LT+KE W YYR+ L A D
Sbjct: 122 PRLEFNVLEWNPARKFYESLGAVDLTDKEGWHYYRVEEQQLAKLAAD 168
>BT001882-1|AAN71656.1| 142|Drosophila melanogaster SD13446p
protein.
Length = 142
Score = 122 bits (295), Expect = 4e-28
Identities = 62/137 (45%), Positives = 84/137 (61%), Gaps = 3/137 (2%)
Frame = +3
Query: 294 MSDGPKLSIKDLVHDGFEKQPPEFFCKV---AEKHKENILGYAIYFPVYSTWEGRALMLE 464
MS+GP+L+ +DL D E+ C+V + + +GY+I + YSTW+GR +E
Sbjct: 1 MSNGPQLTEEDLKRDAGLTGGQEY-CEVYVLVDNDTDQAIGYSICYKAYSTWQGRYFFVE 59
Query: 465 DLYVRMNERRRGVGRLLFDAVAKEASATGCCRLDFHVLEWNPACSFYESKGAVNLTNKEQ 644
D+YVR R+RG G+ +F VA A C RL+F+VLEWNPA FYES GAV+LT+KE
Sbjct: 60 DIYVRPEHRKRGAGKRIFLEVASRAVELQCPRLEFNVLEWNPARKFYESLGAVDLTDKEG 119
Query: 645 WCYYRLTGDALRDFAKD 695
W YYR+ L A D
Sbjct: 120 WHYYRVEEQQLAKLAAD 136
>AE014297-1956|AAN13633.1| 142|Drosophila melanogaster CG4210-PB,
isoform B protein.
Length = 142
Score = 122 bits (295), Expect = 4e-28
Identities = 62/137 (45%), Positives = 84/137 (61%), Gaps = 3/137 (2%)
Frame = +3
Query: 294 MSDGPKLSIKDLVHDGFEKQPPEFFCKV---AEKHKENILGYAIYFPVYSTWEGRALMLE 464
MS+GP+L+ +DL D E+ C+V + + +GY+I + YSTW+GR +E
Sbjct: 1 MSNGPQLTEEDLKRDAGLTGGQEY-CEVYVLVDNDTDQAIGYSICYKAYSTWQGRYFFVE 59
Query: 465 DLYVRMNERRRGVGRLLFDAVAKEASATGCCRLDFHVLEWNPACSFYESKGAVNLTNKEQ 644
D+YVR R+RG G+ +F VA A C RL+F+VLEWNPA FYES GAV+LT+KE
Sbjct: 60 DIYVRPEHRKRGAGKRIFLEVASRAVELQCPRLEFNVLEWNPARKFYESLGAVDLTDKEG 119
Query: 645 WCYYRLTGDALRDFAKD 695
W YYR+ L A D
Sbjct: 120 WHYYRVEEQQLAKLAAD 136
>EF058010-1|ABL84945.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 561 LDFHVLEWNPACSFYESKGAVNLTNKEQWCYYRLTGDA 674
LDFHV++ N A Y GAVN + Q CY +TG A
Sbjct: 361 LDFHVVK-NKA---YILAGAVNAAHAPQMCYALVTGTA 394
>EF058009-1|ABL84944.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 561 LDFHVLEWNPACSFYESKGAVNLTNKEQWCYYRLTGDA 674
LDFHV++ N A Y GAVN + Q CY +TG A
Sbjct: 361 LDFHVVK-NKA---YILAGAVNAAHAPQMCYALVTGTA 394
>EF058008-1|ABL84943.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 561 LDFHVLEWNPACSFYESKGAVNLTNKEQWCYYRLTGDA 674
LDFHV++ N A Y GAVN + Q CY +TG A
Sbjct: 361 LDFHVVK-NKA---YILAGAVNAAHAPQMCYALVTGTA 394
>EF058007-1|ABL84942.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 561 LDFHVLEWNPACSFYESKGAVNLTNKEQWCYYRLTGDA 674
LDFHV++ N A Y GAVN + Q CY +TG A
Sbjct: 361 LDFHVVK-NKA---YILAGAVNAAHAPQMCYALVTGTA 394
>EF058006-1|ABL84941.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 561 LDFHVLEWNPACSFYESKGAVNLTNKEQWCYYRLTGDA 674
LDFHV++ N A Y GAVN + Q CY +TG A
Sbjct: 361 LDFHVVK-NKA---YILAGAVNAAHAPQMCYALVTGTA 394
>EF058005-1|ABL84940.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 561 LDFHVLEWNPACSFYESKGAVNLTNKEQWCYYRLTGDA 674
LDFHV++ N A Y GAVN + Q CY +TG A
Sbjct: 361 LDFHVVK-NKA---YILAGAVNAAHAPQMCYALVTGTA 394
>EF058004-1|ABL84939.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 561 LDFHVLEWNPACSFYESKGAVNLTNKEQWCYYRLTGDA 674
LDFHV++ N A Y GAVN + Q CY +TG A
Sbjct: 361 LDFHVVK-NKA---YILAGAVNAAHAPQMCYALVTGTA 394
>EF058003-1|ABL84938.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 561 LDFHVLEWNPACSFYESKGAVNLTNKEQWCYYRLTGDA 674
LDFHV++ N A Y GAVN + Q CY +TG A
Sbjct: 361 LDFHVVK-NKA---YILAGAVNAAHAPQMCYALVTGTA 394
>EF058002-1|ABL84937.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 561 LDFHVLEWNPACSFYESKGAVNLTNKEQWCYYRLTGDA 674
LDFHV++ N A Y GAVN + Q CY +TG A
Sbjct: 361 LDFHVVK-NKA---YILAGAVNAAHAPQMCYALVTGTA 394
>EF058001-1|ABL84936.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 561 LDFHVLEWNPACSFYESKGAVNLTNKEQWCYYRLTGDA 674
LDFHV++ N A Y GAVN + Q CY +TG A
Sbjct: 361 LDFHVVK-NKA---YILAGAVNAAHAPQMCYALVTGTA 394
>EF058000-1|ABL84935.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 561 LDFHVLEWNPACSFYESKGAVNLTNKEQWCYYRLTGDA 674
LDFHV++ N A Y GAVN + Q CY +TG A
Sbjct: 361 LDFHVVK-NKA---YILAGAVNAAHAPQMCYALVTGTA 394
>BT003226-1|AAO24981.1| 1200|Drosophila melanogaster LP09464p
protein.
Length = 1200
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 561 LDFHVLEWNPACSFYESKGAVNLTNKEQWCYYRLTGDA 674
LDFHV++ N A Y GAVN + Q CY +TG A
Sbjct: 361 LDFHVVK-NKA---YILAGAVNAAHAPQMCYALVTGTA 394
>AY051721-1|AAK93145.1| 1020|Drosophila melanogaster LD25077p
protein.
Length = 1020
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 561 LDFHVLEWNPACSFYESKGAVNLTNKEQWCYYRLTGDA 674
LDFHV++ N A Y GAVN + Q CY +TG A
Sbjct: 181 LDFHVVK-NKA---YILAGAVNAAHAPQMCYALVTGTA 214
>AE014297-3210|AAF56042.2| 1200|Drosophila melanogaster CG6958-PA
protein.
Length = 1200
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 561 LDFHVLEWNPACSFYESKGAVNLTNKEQWCYYRLTGDA 674
LDFHV++ N A Y GAVN + Q CY +TG A
Sbjct: 361 LDFHVVK-NKA---YILAGAVNAAHAPQMCYALVTGTA 394
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,446,693
Number of Sequences: 53049
Number of extensions: 650264
Number of successful extensions: 1724
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1722
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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