Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17g22f
         (754 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81052-3|CAB02871.1|  160|Caenorhabditis elegans Hypothetical pr...    90   1e-18
U64845-5|AAC48027.1|  581|Caenorhabditis elegans Hypothetical pr...    31   0.88 
AF045644-7|AAC02603.1|  262|Caenorhabditis elegans Mechanosensor...    31   0.88 
AF040643-8|AAQ65203.1|  180|Caenorhabditis elegans Hypothetical ...    29   3.5  
AF016684-10|AAB66205.1|  340|Caenorhabditis elegans Hypothetical...    29   3.5  
Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U53334-1|AAA96168.1|  508|Caenorhabditis elegans Hypothetical pr...    29   4.7  
AF047659-11|AAC04428.1|  182|Caenorhabditis elegans Hypothetical...    29   4.7  
U23179-5|AAK68210.2|  347|Caenorhabditis elegans Serpentine rece...    28   6.2  
AC024812-7|AAF59548.2|  419|Caenorhabditis elegans Hypothetical ...    28   6.2  

>Z81052-3|CAB02871.1|  160|Caenorhabditis elegans Hypothetical
           protein D2023.4 protein.
          Length = 160

 Score = 90.2 bits (214), Expect = 1e-18
 Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
 Frame = +3

Query: 219 IVRAATKHDMSAVAEMIQELADYEKMSDGPKLSIKDLVHDGFEKQPPEFFCKVAEKHKEN 398
           IV     H    ++ MI ELA++EKM      + + L  D   K    F   + E+    
Sbjct: 6   IVTVTPDHAEQLIS-MIHELAEFEKMKSSVVNTAEKLRKDIENKAVHGFIAFIGEEPA-- 62

Query: 399 ILGYAIYFPVYSTWEGRALMLEDLYVRMNERRRGVGRLLFDAVAKEASATGCCRLDFHVL 578
             G  +++  YSTW G+ L +EDLY+R   RR G+ R L+  +A+ A   G  RL++ VL
Sbjct: 63  --GMNLFYYAYSTWVGQYLHMEDLYIRPQFRRMGLARTLWKKLAELARDKGIVRLEWAVL 120

Query: 579 EWNP-ACSFYESKGAVNLTNKEQWCYYRLTGDALRDFAKD 695
           +WN  A + Y++   VNLT  E W  +R+ G A+  FA +
Sbjct: 121 DWNKNAIALYDTVDYVNLTKSEGWFTFRMDGAAINKFADE 160


>U64845-5|AAC48027.1|  581|Caenorhabditis elegans Hypothetical
           protein F45F2.6 protein.
          Length = 581

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query: 30  NVNYVIKCVLSYALKINYKFTATTYIL-RIVYCSLLVY 140
           N+ Y I CVL Y++ I Y      YIL  IV+ ++L+Y
Sbjct: 78  NIEYTIFCVLMYSIAILYFIYLYAYILYPIVFNTILLY 115


>AF045644-7|AAC02603.1|  262|Caenorhabditis elegans Mechanosensory
           abnormality protein17 protein.
          Length = 262

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 414 IYFPVYSTWEGRALMLEDLYVRMNERRRGVGRLLFD 521
           +Y     T+EG  L L D YV  + +R+GVG+ + D
Sbjct: 93  LYDSQMQTYEGEILCLLDFYVHFSCQRQGVGQQILD 128


>AF040643-8|AAQ65203.1|  180|Caenorhabditis elegans Hypothetical
           protein F14D2.14 protein.
          Length = 180

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = +3

Query: 507 RLLFDAVAKEASATGCCRLDFHVLEWNPACSFYESKGAVNLTNKEQW-CYYRLTGDALRD 683
           RL  D +AK+     CCR DF   EW  +C    S    ++  +E W  +  +  D   D
Sbjct: 107 RLRTDNLAKQILVKKCCRDDFE-FEWGVSCRVIPS-NLQDIDFEEDWPIWTDIDSDEDCD 164

Query: 684 FAKD 695
           ++ D
Sbjct: 165 YSSD 168


>AF016684-10|AAB66205.1|  340|Caenorhabditis elegans Hypothetical
           protein F45C12.6 protein.
          Length = 340

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/46 (28%), Positives = 27/46 (58%)
 Frame = +3

Query: 189 MSNKYKSGEVIVRAATKHDMSAVAEMIQELADYEKMSDGPKLSIKD 326
           +++K+K  +++ R  +  D    + M++E A+Y ++SD  K  I D
Sbjct: 241 LADKFKLQKLLERTISWIDFLDDSRMLKESAEYSELSDSTKAKILD 286


>Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical protein
            T01E8.5 protein.
          Length = 1270

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
 Frame = +3

Query: 255  VAEMIQELADYEKMSD--GPKLSIKDLVHDGFEKQPPEFFCKVAEKHKENILGYAIYFPV 428
            +A ++ E ++ EK  +    KL++K+LV     K P  F   +  K    I G  +Y   
Sbjct: 772  LAMLVTEASEQEKKLNFHSFKLNLKNLVGTFITKHPDIFKRAMLSK----ITGI-VYMEK 826

Query: 429  YSTWEGRALMLEDLYVRMNERRR 497
            + +W  RAL  ++  V  +ERR+
Sbjct: 827  FVSWWERALKEQEKVVEADERRK 849


>Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical protein
            T01E8.5 protein.
          Length = 1270

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
 Frame = +3

Query: 255  VAEMIQELADYEKMSD--GPKLSIKDLVHDGFEKQPPEFFCKVAEKHKENILGYAIYFPV 428
            +A ++ E ++ EK  +    KL++K+LV     K P  F   +  K    I G  +Y   
Sbjct: 772  LAMLVTEASEQEKKLNFHSFKLNLKNLVGTFITKHPDIFKRAMLSK----ITGI-VYMEK 826

Query: 429  YSTWEGRALMLEDLYVRMNERRR 497
            + +W  RAL  ++  V  +ERR+
Sbjct: 827  FVSWWERALKEQEKVVEADERRK 849


>U53334-1|AAA96168.1|  508|Caenorhabditis elegans Hypothetical
           protein R105.1 protein.
          Length = 508

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -3

Query: 119 YNPKYICSCCEFIINLECVTQNTFN 45
           YN  +I S C    NLEC   NT N
Sbjct: 433 YNITFIISACSECSNLECSNSNTLN 457


>AF047659-11|AAC04428.1|  182|Caenorhabditis elegans Hypothetical
           protein K07H8.3 protein.
          Length = 182

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 5/111 (4%)
 Frame = +3

Query: 375 VAEKHKENILGYAIYFPVYSTWEGRALMLEDLYVRMNERRRGVGRLLFDAVAKEASATGC 554
           +AE HK N++GY +        E     +  L V+ + RR G+   + D  A+    T  
Sbjct: 44  IAEDHKGNVVGYVLAKMEEDPGEEPHGHITSLAVKRSYRRLGLANKMMDQTARAMVETYN 103

Query: 555 CR-LDFHVLEWN-PACSFYESKGAVNLTNKEQWCYYRLTGDAL---RDFAK 692
            + +  HV   N  A + Y++     + + E   YY    DA    RD AK
Sbjct: 104 AKYVSLHVRVSNRAALNLYKNTLKFEIVDTEP-KYYADGEDAYAMRRDLAK 153


>U23179-5|AAK68210.2|  347|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 2 protein.
          Length = 347

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -3

Query: 617 TFALVKRTSRIPLQDVEVQXXXXXXXRFLCNCI 519
           +FALV  TS IP      +        F+CNCI
Sbjct: 178 SFALVPETSAIPFNSYFWELLYAEIGNFICNCI 210


>AC024812-7|AAF59548.2|  419|Caenorhabditis elegans Hypothetical
           protein Y54E10BR.8 protein.
          Length = 419

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 711 EHLPSHLWQSHVMHLP*ACSSTTAP 637
           EHL SH+W  H+   P  C+    P
Sbjct: 21  EHLESHIWSRHLQAFPFKCAYCDFP 45


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,404,879
Number of Sequences: 27780
Number of extensions: 344427
Number of successful extensions: 953
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)