Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17g11r
         (940 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    29   0.080
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   1.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      25   1.3  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    25   1.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   5.3  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   7.0  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   9.2  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 28.7 bits (61), Expect = 0.080
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 236 FKEGKCTLNSQ*PCRFGKCEHGIQNTKSQVLVMWC 132
           FKEG   L +   CRF     GI +   +  ++WC
Sbjct: 187 FKEGDRFLQAANACRFWPTGRGIYHNDDKTFLVWC 221


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -2

Query: 546 YLYSTKIINNIYIIERL 496
           YLYS K++ N Y +ERL
Sbjct: 259 YLYSHKLLLNRYYLERL 275


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -2

Query: 546 YLYSTKIINNIYIIERL 496
           YLYS K++ N Y +ERL
Sbjct: 259 YLYSHKLLLNRYYLERL 275


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +2

Query: 758 YITLPKYHCVPSAMVVDAEK 817
           ++T+P+Y  VPS++ V +EK
Sbjct: 81  FVTVPRYKGVPSSLNVISEK 100


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 727 MDTNWKEIRTLYNIAEISLCTIGH 798
           M   WK  RT ++I  + L   GH
Sbjct: 217 MKLGWKSARTRFDILPLILSANGH 240


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 443 TEYFKAIIKINICFYILIYRPYTLQFNDV 357
           + YF+ ++  N C +  I  P  + FND+
Sbjct: 58  SSYFQKLLLSNPCKHPTIIMPQDVCFNDL 86


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 638 CNLNL*EQMKEDLCVCILKLDKSILFSM 555
           CN  L      DLCV +L +  ++L+ +
Sbjct: 76  CNYLLVSLAVSDLCVALLVMPMALLYEI 103


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 263,012
Number of Sequences: 438
Number of extensions: 6284
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30718506
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)