Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17g11f
(789 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC053992-1|AAH53992.1| 1312|Homo sapiens SR-related CTD-associat... 40 0.010
AK024444-1|BAB15734.1| 1343|Homo sapiens FLJ00034 protein protein. 40 0.010
AF254411-1|AAF87552.1| 1312|Homo sapiens ser/arg-rich pre-mRNA s... 40 0.010
Y13440-1|CAA73851.1| 582|Homo sapiens Rox protein. 38 0.041
X96401-1|CAA65265.1| 582|Homo sapiens ROX protein protein. 38 0.041
BC117563-1|AAI17564.1| 582|Homo sapiens MAX binding protein pro... 38 0.041
BC012082-1|AAH12082.1| 457|Homo sapiens FLJ20366 protein protein. 32 2.1
AY705385-1|AAU93914.1| 663|Homo sapiens microtubule-associated ... 32 2.1
AK000373-1|BAA91121.1| 595|Homo sapiens protein ( Homo sapiens ... 32 2.1
AB195679-1|BAD72979.1| 660|Homo sapiens Golgi-localized syntaph... 32 2.1
AB195678-1|BAD72978.1| 544|Homo sapiens Golgi-localized syntaph... 32 2.1
AB195677-1|BAD72977.1| 662|Homo sapiens Golgi-localized syntaph... 32 2.1
AB195676-1|BAD72976.1| 662|Homo sapiens Golgi-localized syntaph... 32 2.1
AB040905-1|BAA95996.1| 601|Homo sapiens KIAA1472 protein protein. 32 2.1
AB014341-1|BAA28350.1| 262|Homo sapiens VEGF single chain antib... 32 2.7
U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein. 31 6.3
BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein. 31 6.3
AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,... 31 6.3
BC071599-1|AAH71599.1| 1121|Homo sapiens pleckstrin homology dom... 30 8.3
BC033239-1|AAH33239.1| 748|Homo sapiens PLEKHA7 protein protein. 30 8.3
>BC053992-1|AAH53992.1| 1312|Homo sapiens SR-related CTD-associated
factor 1 protein.
Length = 1312
Score = 39.9 bits (89), Expect = 0.010
Identities = 26/72 (36%), Positives = 29/72 (40%)
Frame = +3
Query: 459 AVRSMSSQPEPKTSPVDVDPSPKPLPPTSTGMIGRRAQCPLERYGPLVKTGRQYSTRPPM 638
A S SS P P S P P P PP R + Y P T YS PP
Sbjct: 189 APSSASSSPSPSPSSSSPSPPPPPPPPAPPAPPAPR----FDIYDPFHPTDEAYS--PPP 242
Query: 639 KPGQVYDPYKQT 674
P Q YDP++ T
Sbjct: 243 APEQKYDPFEPT 254
>AK024444-1|BAB15734.1| 1343|Homo sapiens FLJ00034 protein protein.
Length = 1343
Score = 39.9 bits (89), Expect = 0.010
Identities = 26/72 (36%), Positives = 29/72 (40%)
Frame = +3
Query: 459 AVRSMSSQPEPKTSPVDVDPSPKPLPPTSTGMIGRRAQCPLERYGPLVKTGRQYSTRPPM 638
A S SS P P S P P P PP R + Y P T YS PP
Sbjct: 220 APSSASSSPSPSPSSSSPSPPPPPPPPAPPAPPAPR----FDIYDPFHPTDEAYS--PPP 273
Query: 639 KPGQVYDPYKQT 674
P Q YDP++ T
Sbjct: 274 APEQKYDPFEPT 285
>AF254411-1|AAF87552.1| 1312|Homo sapiens ser/arg-rich pre-mRNA
splicing factor SR-A1 protein.
Length = 1312
Score = 39.9 bits (89), Expect = 0.010
Identities = 26/72 (36%), Positives = 29/72 (40%)
Frame = +3
Query: 459 AVRSMSSQPEPKTSPVDVDPSPKPLPPTSTGMIGRRAQCPLERYGPLVKTGRQYSTRPPM 638
A S SS P P S P P P PP R + Y P T YS PP
Sbjct: 189 APSSASSSPSPSPSSSSPSPPPPPPPPAPPAPPAPR----FDIYDPFHPTDEAYS--PPP 242
Query: 639 KPGQVYDPYKQT 674
P Q YDP++ T
Sbjct: 243 APEQKYDPFEPT 254
>Y13440-1|CAA73851.1| 582|Homo sapiens Rox protein.
Length = 582
Score = 37.9 bits (84), Expect = 0.041
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Frame = +3
Query: 396 IDKIQEEEAEKIGMTKDEYRAAVRSMSSQ-PEPKTSPVDVDPSPKPLPPTSTGMIGRRAQ 572
ID+ EE+ +G K +R + S P P T+P + P P P P S + A
Sbjct: 339 IDEDMEEDRAGLGPPKLSHRPQPELLKSTLPPPSTTPAPLPPHPHP-HPHSVAL--PPAH 395
Query: 573 CPLERYGPLVKTGRQYSTRPPMKPGQVYDPYKQTLV 680
P+++ P KT PP P Q P LV
Sbjct: 396 LPVQQQQPQQKTPLPAPPPPPAAPAQTLVPAPAHLV 431
>X96401-1|CAA65265.1| 582|Homo sapiens ROX protein protein.
Length = 582
Score = 37.9 bits (84), Expect = 0.041
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Frame = +3
Query: 396 IDKIQEEEAEKIGMTKDEYRAAVRSMSSQ-PEPKTSPVDVDPSPKPLPPTSTGMIGRRAQ 572
ID+ EE+ +G K +R + S P P T+P + P P P P S + A
Sbjct: 339 IDEDMEEDRAGLGPPKLSHRPQPELLKSTLPPPSTTPAPLPPHPHP-HPHSVAL--PPAH 395
Query: 573 CPLERYGPLVKTGRQYSTRPPMKPGQVYDPYKQTLV 680
P+++ P KT PP P Q P LV
Sbjct: 396 LPVQQQQPQQKTPLPAPPPPPAAPAQTLVPAPAHLV 431
>BC117563-1|AAI17564.1| 582|Homo sapiens MAX binding protein
protein.
Length = 582
Score = 37.9 bits (84), Expect = 0.041
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Frame = +3
Query: 396 IDKIQEEEAEKIGMTKDEYRAAVRSMSSQ-PEPKTSPVDVDPSPKPLPPTSTGMIGRRAQ 572
ID+ EE+ +G K +R + S P P T+P + P P P P S + A
Sbjct: 339 IDEDMEEDRAGLGPPKLSHRPQPELLKSTLPPPSTTPAPLPPHPHP-HPHSVAL--PPAH 395
Query: 573 CPLERYGPLVKTGRQYSTRPPMKPGQVYDPYKQTLV 680
P+++ P KT PP P Q P LV
Sbjct: 396 LPVQQQQPQQKTPLPAPPPPPAAPAQTLVPAPAHLV 431
>BC012082-1|AAH12082.1| 457|Homo sapiens FLJ20366 protein protein.
Length = 457
Score = 32.3 bits (70), Expect = 2.1
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 498 SPVDVDPSPKPLPPTSTGMIG-RRAQCP--LERYGPLVKTGRQYSTRPPMKPGQVYDPYK 668
SPV++ PS P P+S+ + + C + R G + G + RPP P Q P +
Sbjct: 8 SPVNIHPSYAPSSPSSSNSGSYKGSDCSPIMRRSGRYMSCGENHGVRPP-NPEQYLTPLQ 66
Query: 669 QTLVFLGSLK 698
Q V + LK
Sbjct: 67 QKEVTVRHLK 76
>AY705385-1|AAU93914.1| 663|Homo sapiens microtubule-associated
protein protein.
Length = 663
Score = 32.3 bits (70), Expect = 2.1
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 498 SPVDVDPSPKPLPPTSTGMIG-RRAQCP--LERYGPLVKTGRQYSTRPPMKPGQVYDPYK 668
SPV++ PS P P+S+ + + C + R G + G + RPP P Q P +
Sbjct: 214 SPVNIHPSYAPSSPSSSNSGSYKGSDCSPIMRRSGRYMSCGENHGVRPP-NPEQYLTPLQ 272
Query: 669 QTLVFLGSLK 698
Q V + LK
Sbjct: 273 QKEVTVRHLK 282
>AK000373-1|BAA91121.1| 595|Homo sapiens protein ( Homo sapiens
cDNA FLJ20366 fis, clone HEP18008. ).
Length = 595
Score = 32.3 bits (70), Expect = 2.1
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 498 SPVDVDPSPKPLPPTSTGMIG-RRAQCP--LERYGPLVKTGRQYSTRPPMKPGQVYDPYK 668
SPV++ PS P P+S+ + + C + R G + G + RPP P Q P +
Sbjct: 146 SPVNIHPSYAPSSPSSSNSGSYKGSDCSPIMRRSGRYMSCGENHGVRPP-NPEQYLTPLQ 204
Query: 669 QTLVFLGSLK 698
Q V + LK
Sbjct: 205 QKEVTVRHLK 214
>AB195679-1|BAD72979.1| 660|Homo sapiens Golgi-localized
syntaphilin-related proten C protein.
Length = 660
Score = 32.3 bits (70), Expect = 2.1
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 498 SPVDVDPSPKPLPPTSTGMIG-RRAQCP--LERYGPLVKTGRQYSTRPPMKPGQVYDPYK 668
SPV++ PS P P+S+ + + C + R G + G + RPP P Q P +
Sbjct: 211 SPVNIHPSYAPSSPSSSNSGSYKGSDCSPIMRRSGRYMSCGENHGVRPP-NPEQYLTPLQ 269
Query: 669 QTLVFLGSLK 698
Q V + LK
Sbjct: 270 QKEVTVRHLK 279
>AB195678-1|BAD72978.1| 544|Homo sapiens Golgi-localized
syntaphilin-related proten B protein.
Length = 544
Score = 32.3 bits (70), Expect = 2.1
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 498 SPVDVDPSPKPLPPTSTGMIG-RRAQCP--LERYGPLVKTGRQYSTRPPMKPGQVYDPYK 668
SPV++ PS P P+S+ + + C + R G + G + RPP P Q P +
Sbjct: 95 SPVNIHPSYAPSSPSSSNSGSYKGSDCSPIMRRSGRYMSCGENHGVRPP-NPEQYLTPLQ 153
Query: 669 QTLVFLGSLK 698
Q V + LK
Sbjct: 154 QKEVTVRHLK 163
>AB195677-1|BAD72977.1| 662|Homo sapiens Golgi-localized
syntaphilin-related proten A protein.
Length = 662
Score = 32.3 bits (70), Expect = 2.1
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 498 SPVDVDPSPKPLPPTSTGMIG-RRAQCP--LERYGPLVKTGRQYSTRPPMKPGQVYDPYK 668
SPV++ PS P P+S+ + + C + R G + G + RPP P Q P +
Sbjct: 213 SPVNIHPSYAPSSPSSSNSGSYKGSDCSPIMRRSGRYMSCGENHGVRPP-NPEQYLTPLQ 271
Query: 669 QTLVFLGSLK 698
Q V + LK
Sbjct: 272 QKEVTVRHLK 281
>AB195676-1|BAD72976.1| 662|Homo sapiens Golgi-localized
syntaphilin-related proten A protein.
Length = 662
Score = 32.3 bits (70), Expect = 2.1
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 498 SPVDVDPSPKPLPPTSTGMIG-RRAQCP--LERYGPLVKTGRQYSTRPPMKPGQVYDPYK 668
SPV++ PS P P+S+ + + C + R G + G + RPP P Q P +
Sbjct: 213 SPVNIHPSYAPSSPSSSNSGSYKGSDCSPIMRRSGRYMSCGENHGVRPP-NPEQYLTPLQ 271
Query: 669 QTLVFLGSLK 698
Q V + LK
Sbjct: 272 QKEVTVRHLK 281
>AB040905-1|BAA95996.1| 601|Homo sapiens KIAA1472 protein protein.
Length = 601
Score = 32.3 bits (70), Expect = 2.1
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 498 SPVDVDPSPKPLPPTSTGMIG-RRAQCP--LERYGPLVKTGRQYSTRPPMKPGQVYDPYK 668
SPV++ PS P P+S+ + + C + R G + G + RPP P Q P +
Sbjct: 152 SPVNIHPSYAPSSPSSSNSGSYKGSDCSPIMRRSGRYMSCGENHGVRPP-NPEQYLTPLQ 210
Query: 669 QTLVFLGSLK 698
Q V + LK
Sbjct: 211 QKEVTVRHLK 220
>AB014341-1|BAA28350.1| 262|Homo sapiens VEGF single chain antibody
protein.
Length = 262
Score = 31.9 bits (69), Expect = 2.7
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 625 VEYCRPVLTRGPYRSNGH*ARRPIIPVDVGGRGLGDGSTSTG 500
V YC LTR ++S GH + ++ V GG G G G + G
Sbjct: 95 VYYCAR-LTRNKFKSRGHWGQGTLVTVSRGGGGSGGGGSGGG 135
>U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein.
Length = 346
Score = 30.7 bits (66), Expect = 6.3
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 447 EYRAAVRSMSSQPEP-KTSPVDVDPSPKPLPPTSTGMIGRRAQCPLERY-GPLVKTGRQY 620
E A++ ++ Q P T P+ V + P T+ ++ + Q P RY GPL + +++
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRF 237
Query: 621 STRP 632
P
Sbjct: 238 RFSP 241
>BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein.
Length = 346
Score = 30.7 bits (66), Expect = 6.3
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 447 EYRAAVRSMSSQPEP-KTSPVDVDPSPKPLPPTSTGMIGRRAQCPLERY-GPLVKTGRQY 620
E A++ ++ Q P T P+ V + P T+ ++ + Q P RY GPL + +++
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRF 237
Query: 621 STRP 632
P
Sbjct: 238 RFSP 241
>AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 346
Score = 30.7 bits (66), Expect = 6.3
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 447 EYRAAVRSMSSQPEP-KTSPVDVDPSPKPLPPTSTGMIGRRAQCPLERY-GPLVKTGRQY 620
E A++ ++ Q P T P+ V + P T+ ++ + Q P RY GPL + +++
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRF 237
Query: 621 STRP 632
P
Sbjct: 238 RFSP 241
>BC071599-1|AAH71599.1| 1121|Homo sapiens pleckstrin homology domain
containing, family A member 7 protein.
Length = 1121
Score = 30.3 bits (65), Expect = 8.3
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +3
Query: 441 KDEYRAAVRSMSSQPEPKTSPVDVDPSPKPLPPTSTGMIGRRAQCPLE-RYGPLVKTGRQ 617
K+ R V P P S + P P+P PPTS + PLE R P ++T
Sbjct: 837 KNPERKTVPLFPHPPVPSLSTSESKPPPQPSPPTSP------VRTPLEVRLFPQLQTYVP 890
Query: 618 YSTRPP 635
Y PP
Sbjct: 891 YRPHPP 896
>BC033239-1|AAH33239.1| 748|Homo sapiens PLEKHA7 protein protein.
Length = 748
Score = 30.3 bits (65), Expect = 8.3
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +3
Query: 441 KDEYRAAVRSMSSQPEPKTSPVDVDPSPKPLPPTSTGMIGRRAQCPLE-RYGPLVKTGRQ 617
K+ R V P P S + P P+P PPTS + PLE R P ++T
Sbjct: 463 KNPERKTVPLFPHPPVPSLSTSESKPPPQPSPPTSP------VRTPLEVRLFPQLQTYVP 516
Query: 618 YSTRPP 635
Y PP
Sbjct: 517 YRPHPP 522
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,205,913
Number of Sequences: 237096
Number of extensions: 3190782
Number of successful extensions: 19903
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 18222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19767
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -